RNA–Protein interactions for RNA: ENST00000598706.1

RAB11B-203, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB11B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-203ENST00000598706 MTX1Q13505 466 aa17.12■□□□□ 0.33
RAB11B-203ENST00000598706 KRT40Q6A162 431 aa17.12■□□□□ 0.33
RAB11B-203ENST00000598706 RIOX2Q8IUF8 465 aa17.12■□□□□ 0.33
RAB11B-203ENST00000598706 MSL3Q8N5Y2 521 aaKnown RBP17.12■□□□□ 0.33
RAB11B-203ENST00000598706 SPC25Q9HBM1 224 aa17.12■□□□□ 0.33
RAB11B-203ENST00000598706 PIH1D3Q9NQM4 214 aaKnown RBP17.12■□□□□ 0.33
RAB11B-203ENST00000598706 UMODL1Q5DID0 1318 aa17.12■□□□□ 0.33
RAB11B-203ENST00000598706 SNAI1O95863 264 aaPredicted RBP17.11■□□□□ 0.33
RAB11B-203ENST00000598706 ATP2A2P16615 1042 aaKnown RBP17.11■□□□□ 0.33
RAB11B-203ENST00000598706 SPICE1Q8N0Z3 855 aa17.11■□□□□ 0.33
RAB11B-203ENST00000598706 UPF3AQ9H1J1 476 aaKnown RBP17.11■□□□□ 0.33
RAB11B-203ENST00000598706 CD320Q9NPF0 282 aa17.11■□□□□ 0.33
RAB11B-203ENST00000598706 COL4A4P53420 1690 aaPredicted RBP17.1■□□□□ 0.33
RAB11B-203ENST00000598706 EPOPA6NHQ4 379 aa17.1■□□□□ 0.33
RAB11B-203ENST00000598706 ZBBXA8MT70 800 aa17.1■□□□□ 0.33
RAB11B-203ENST00000598706 ADCY6O43306 1168 aa17.1■□□□□ 0.33
RAB11B-203ENST00000598706 CA3P07451 260 aa17.1■□□□□ 0.33
RAB11B-203ENST00000598706 ZAP70P43403 619 aa17.1■□□□□ 0.33
RAB11B-203ENST00000598706 CCL23P55773 120 aa17.1■□□□□ 0.33
RAB11B-203ENST00000598706 NHLH1Q02575 133 aa17.1■□□□□ 0.33
RAB11B-203ENST00000598706 GABPAQ06546 454 aa17.1■□□□□ 0.33
RAB11B-203ENST00000598706 ALDH1L2Q3SY69 923 aa17.1■□□□□ 0.33
RAB11B-203ENST00000598706 GNASQ5JWF2 1037 aa17.1■□□□□ 0.33
RAB11B-203ENST00000598706 CCDC158Q5M9N0 1113 aa17.1■□□□□ 0.33
RAB11B-203ENST00000598706 CERS4Q9HA82 394 aa17.1■□□□□ 0.33
RAB11B-203ENST00000598706 SMC4Q9NTJ3 1288 aa17.1■□□□□ 0.33
RAB11B-203ENST00000598706 WDR46O15213 610 aaKnown RBP17.09■□□□□ 0.33
RAB11B-203ENST00000598706 COPB2P35606 906 aa17.09■□□□□ 0.33
RAB11B-203ENST00000598706 GJA9P57773 515 aa17.09■□□□□ 0.33
RAB11B-203ENST00000598706 TMEM67Q5HYA8 995 aa17.09■□□□□ 0.33
RAB11B-203ENST00000598706 ADAMTS5Q9UNA0 930 aa17.09■□□□□ 0.33
RAB11B-203ENST00000598706 STAT3P40763 770 aa17.08■□□□□ 0.32
RAB11B-203ENST00000598706 G3BP1Q13283 466 aaKnown RBP eCLIP17.08■□□□□ 0.32
RAB11B-203ENST00000598706 MAMDC4Q6UXC1 1216 aa17.08■□□□□ 0.32
RAB11B-203ENST00000598706 TMEM179Q6ZVK1 233 aa17.08■□□□□ 0.32
RAB11B-203ENST00000598706 RPUSD2Q8IZ73 545 aaKnown RBP17.08■□□□□ 0.32
RAB11B-203ENST00000598706 UIMC1Q96RL1 719 aa17.08■□□□□ 0.32
RAB11B-203ENST00000598706 DBNDD2Q9BQY9 259 aa17.08■□□□□ 0.32
RAB11B-203ENST00000598706 NOC4LQ9BVI4 516 aaKnown RBP17.08■□□□□ 0.32
RAB11B-203ENST00000598706 WNT8AQ9H1J5 351 aa17.08■□□□□ 0.32
RAB11B-203ENST00000598706 SH2D4AQ9H788 454 aa17.08■□□□□ 0.32
RAB11B-203ENST00000598706 VCPKMTQ9H867 229 aa17.08■□□□□ 0.32
RAB11B-203ENST00000598706 ARHGEF10LQ9HCE6 1279 aa17.08■□□□□ 0.32
RAB11B-203ENST00000598706 ZNF214Q9UL59 606 aaPredicted RBP17.08■□□□□ 0.32
RAB11B-203ENST00000598706 TMX2Q9Y320 296 aa17.08■□□□□ 0.32
RAB11B-203ENST00000598706 IDH1O75874 414 aaKnown RBP17.07■□□□□ 0.32
RAB11B-203ENST00000598706 POLR3DP05423 398 aaPredicted RBP17.07■□□□□ 0.32
RAB11B-203ENST00000598706 ACVR2BQ13705 512 aa17.07■□□□□ 0.32
RAB11B-203ENST00000598706 CLEC10AQ8IUN9 316 aa17.07■□□□□ 0.32
RAB11B-203ENST00000598706 MAGEB6Q8N7X4 407 aa17.07■□□□□ 0.32
RAB11B-203ENST00000598706 SLC43A3Q8NBI5 491 aa17.07■□□□□ 0.32
RAB11B-203ENST00000598706 FBXO28Q9NVF7 368 aa17.07■□□□□ 0.32
RAB11B-203ENST00000598706 VWA5AO00534 786 aa17.06■□□□□ 0.32
RAB11B-203ENST00000598706 GNAI3P08754 354 aa17.06■□□□□ 0.32
RAB11B-203ENST00000598706 EVX2Q03828 476 aa17.06■□□□□ 0.32
RAB11B-203ENST00000598706 ICA1Q05084 483 aa17.06■□□□□ 0.32
RAB11B-203ENST00000598706 CCDC144BQ3MJ40 725 aa17.06■□□□□ 0.32
RAB11B-203ENST00000598706 TNNI3KQ59H18 835 aa17.06■□□□□ 0.32
RAB11B-203ENST00000598706 ARNTL2Q8WYA1 636 aa17.06■□□□□ 0.32
RAB11B-203ENST00000598706 VWCEQ96DN2 955 aa17.06■□□□□ 0.32
RAB11B-203ENST00000598706 ZNF512BQ96KM6 892 aaPredicted RBP17.06■□□□□ 0.32
RAB11B-203ENST00000598706 FPGT-TNNI3KV9GXZ4 949 aa17.06■□□□□ 0.32
RAB11B-203ENST00000598706 SCN5AQ14524 2016 aa17.06■□□□□ 0.32
RAB11B-203ENST00000598706 CTAGE5O15320 804 aa17.05■□□□□ 0.32
RAB11B-203ENST00000598706 TTLL4Q14679 1199 aa17.05■□□□□ 0.32
RAB11B-203ENST00000598706 CSPP1Q1MSJ5 1256 aa17.05■□□□□ 0.32
RAB11B-203ENST00000598706 ZNF467Q7Z7K2 595 aaPredicted RBP17.05■□□□□ 0.32
RAB11B-203ENST00000598706 SIAH1Q8IUQ4 282 aa17.05■□□□□ 0.32
RAB11B-203ENST00000598706 REPS2Q8NFH8 660 aa17.05■□□□□ 0.32
RAB11B-203ENST00000598706 DDX11Q96FC9 970 aa17.05■□□□□ 0.32
RAB11B-203ENST00000598706 FBXL18Q96ME1 805 aa17.05■□□□□ 0.32
RAB11B-203ENST00000598706 API5Q9BZZ5 524 aaKnown RBP17.05■□□□□ 0.32
RAB11B-203ENST00000598706 GPR108Q9NPR9 543 aa17.05■□□□□ 0.32
RAB11B-203ENST00000598706 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.05■□□□□ 0.32
RAB11B-203ENST00000598706 PPP1R9AQ9ULJ8 1098 aa17.05■□□□□ 0.32
RAB11B-203ENST00000598706 ZNF318Q5VUA4 2279 aa17.04■□□□□ 0.32
RAB11B-203ENST00000598706 DNAJC25-GNG10A0A024R161 153 aa17.04■□□□□ 0.32
RAB11B-203ENST00000598706 BEX3Q00994 111 aa17.04■□□□□ 0.32
RAB11B-203ENST00000598706 TAP1Q03518 808 aa17.04■□□□□ 0.32
RAB11B-203ENST00000598706 CXCL17Q6UXB2 119 aa17.04■□□□□ 0.32
RAB11B-203ENST00000598706 GJD3Q8N144 294 aa17.04■□□□□ 0.32
RAB11B-203ENST00000598706 SCLYQ96I15 445 aa17.04■□□□□ 0.32
RAB11B-203ENST00000598706 KCNH6Q9H252 994 aa17.04■□□□□ 0.32
RAB11B-203ENST00000598706 ABHD16BQ9H3Z7 469 aa17.04■□□□□ 0.32
RAB11B-203ENST00000598706 NOB1Q9ULX3 412 aaKnown RBP17.04■□□□□ 0.32
RAB11B-203ENST00000598706 PNMA6EA0A0J9YXQ4 647 aa17.03■□□□□ 0.32
RAB11B-203ENST00000598706 B4GALT4O60513 344 aa17.03■□□□□ 0.32
RAB11B-203ENST00000598706 ARHGEF15O94989 841 aa17.03■□□□□ 0.32
RAB11B-203ENST00000598706 PFKMP08237 780 aa17.03■□□□□ 0.32
RAB11B-203ENST00000598706 NKX3-2P78367 333 aa17.03■□□□□ 0.32
RAB11B-203ENST00000598706 GRB10Q13322 594 aa17.03■□□□□ 0.32
RAB11B-203ENST00000598706 ITGA7Q13683 1181 aa17.03■□□□□ 0.32
RAB11B-203ENST00000598706 RIOK1Q9BRS2 568 aaKnown RBP17.03■□□□□ 0.32
RAB11B-203ENST00000598706 TRPV6Q9H1D0 765 aa17.03■□□□□ 0.32
RAB11B-203ENST00000598706 MCM9Q9NXL9 1143 aa17.03■□□□□ 0.32
RAB11B-203ENST00000598706 E9PSI1 815 aa17.02■□□□□ 0.32
RAB11B-203ENST00000598706 CABYRO75952 493 aa17.02■□□□□ 0.32
RAB11B-203ENST00000598706 ALADP13716 330 aa17.02■□□□□ 0.32
RAB11B-203ENST00000598706 SNRNP48Q6IEG0 339 aaKnown RBP17.02■□□□□ 0.32
RAB11B-203ENST00000598706 FAM178BQ8IXR5 827 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms