RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 PRAMEF19Q5SWL8 479 aa16.32■□□□□ 0.2
SCAF1-203ENST00000598359 RIOX2Q8IUF8 465 aa16.32■□□□□ 0.2
SCAF1-203ENST00000598359 ANKLE1Q8NAG6 615 aa16.32■□□□□ 0.2
SCAF1-203ENST00000598359 MMP19Q99542 508 aa16.32■□□□□ 0.2
SCAF1-203ENST00000598359 NBPF3Q9H094 633 aa16.32■□□□□ 0.2
SCAF1-203ENST00000598359 IL17RBQ9NRM6 502 aa16.32■□□□□ 0.2
SCAF1-203ENST00000598359 ANAPC4Q9UJX5 808 aa16.32■□□□□ 0.2
SCAF1-203ENST00000598359 MTMR7Q9Y216 660 aa16.32■□□□□ 0.2
SCAF1-203ENST00000598359 RIPK3Q9Y572 518 aa16.32■□□□□ 0.2
SCAF1-203ENST00000598359 ALPK3Q96L96 1907 aa16.31■□□□□ 0.2
SCAF1-203ENST00000598359 PFASO15067 1338 aa16.31■□□□□ 0.2
SCAF1-203ENST00000598359 CCDC171Q6TFL3 1326 aa16.31■□□□□ 0.2
SCAF1-203ENST00000598359 EVI5O60447 810 aa16.31■□□□□ 0.2
SCAF1-203ENST00000598359 PDE4AP27815 886 aa16.31■□□□□ 0.2
SCAF1-203ENST00000598359 ALX1Q15699 326 aa16.31■□□□□ 0.2
SCAF1-203ENST00000598359 RRP12Q5JTH9 1297 aaKnown RBP16.31■□□□□ 0.2
SCAF1-203ENST00000598359 ANO1Q5XXA6 986 aa16.31■□□□□ 0.2
SCAF1-203ENST00000598359 SNRNP48Q6IEG0 339 aaKnown RBP16.31■□□□□ 0.2
SCAF1-203ENST00000598359 CPXCR1Q8N123 301 aa16.31■□□□□ 0.2
SCAF1-203ENST00000598359 PRPF38AQ8NAV1 312 aaKnown RBP16.31■□□□□ 0.2
SCAF1-203ENST00000598359 GMCL1P1Q8NEA9 526 aa16.31■□□□□ 0.2
SCAF1-203ENST00000598359 OSBPL3Q9H4L5 887 aa16.31■□□□□ 0.2
SCAF1-203ENST00000598359 C11orf49Q9H6J7 331 aa16.31■□□□□ 0.2
SCAF1-203ENST00000598359 RAVER2Q9HCJ3 691 aaKnown RBP16.31■□□□□ 0.2
SCAF1-203ENST00000598359 TOMM22Q9NS69 142 aa16.31■□□□□ 0.2
SCAF1-203ENST00000598359 STX8Q9UNK0 236 aa16.31■□□□□ 0.2
SCAF1-203ENST00000598359 BMP3P12645 472 aa16.3■□□□□ 0.2
SCAF1-203ENST00000598359 CYBAP13498 195 aa16.3■□□□□ 0.2
SCAF1-203ENST00000598359 CAPN2P17655 700 aa16.3■□□□□ 0.2
SCAF1-203ENST00000598359 OLFML2BQ68BL8 750 aa16.3■□□□□ 0.2
SCAF1-203ENST00000598359 C7orf61Q8IZ16 206 aa16.3■□□□□ 0.2
SCAF1-203ENST00000598359 ABRAQ8N0Z2 381 aa16.3■□□□□ 0.2
SCAF1-203ENST00000598359 MAML3Q96JK9 1138 aa16.3■□□□□ 0.2
SCAF1-203ENST00000598359 DDX20Q9UHI6 824 aaKnown RBP16.3■□□□□ 0.2
SCAF1-203ENST00000598359 NR2E3Q9Y5X4 410 aa16.3■□□□□ 0.2
SCAF1-203ENST00000598359 TMEM232C9JQI7 657 aa16.29■□□□□ 0.2
SCAF1-203ENST00000598359 SOX1O00570 391 aaPredicted RBP16.29■□□□□ 0.2
SCAF1-203ENST00000598359 ZBED4O75132 1171 aa16.29■□□□□ 0.2
SCAF1-203ENST00000598359 MCCP23508 829 aa16.29■□□□□ 0.2
SCAF1-203ENST00000598359 KCTD2Q14681 263 aa16.29■□□□□ 0.2
SCAF1-203ENST00000598359 CWC27Q6UX04 472 aaKnown RBP16.29■□□□□ 0.2
SCAF1-203ENST00000598359 TEX13BQ9BXU2 312 aa16.29■□□□□ 0.2
SCAF1-203ENST00000598359 FEM1BQ9UK73 627 aa16.29■□□□□ 0.2
SCAF1-203ENST00000598359 CTDP1Q9Y5B0 961 aaPredicted RBP16.29■□□□□ 0.2
SCAF1-203ENST00000598359 FRMPD3Q5JV73 1810 aa16.29■□□□□ 0.2
SCAF1-203ENST00000598359 A0A1W2PPC1 479 aa16.28■□□□□ 0.2
SCAF1-203ENST00000598359 ORC4O43929 436 aa16.28■□□□□ 0.2
SCAF1-203ENST00000598359 SNAP25P60880 206 aa16.28■□□□□ 0.2
SCAF1-203ENST00000598359 IKQ13123 557 aaPredicted RBP16.28■□□□□ 0.2
SCAF1-203ENST00000598359 KCTD1Q719H9 257 aa16.28■□□□□ 0.2
SCAF1-203ENST00000598359 TBC1D10CQ8IV04 446 aa16.28■□□□□ 0.2
SCAF1-203ENST00000598359 LRCH3Q96II8 777 aa16.28■□□□□ 0.2
SCAF1-203ENST00000598359 SLC38A10Q9HBR0 1119 aa16.28■□□□□ 0.2
SCAF1-203ENST00000598359 DIAPH3Q9NSV4 1193 aa16.28■□□□□ 0.2
SCAF1-203ENST00000598359 SLC5A4Q9NY91 659 aa16.28■□□□□ 0.2
SCAF1-203ENST00000598359 ZMYND8Q9ULU4 1186 aaPredicted RBP16.28■□□□□ 0.2
SCAF1-203ENST00000598359 FGRP09769 529 aa16.27■□□□□ 0.2
SCAF1-203ENST00000598359 COL6A1P12109 1028 aa16.27■□□□□ 0.2
SCAF1-203ENST00000598359 TAL1P17542 331 aaPredicted RBP16.27■□□□□ 0.2
SCAF1-203ENST00000598359 SLC1A4P43007 532 aa16.27■□□□□ 0.2
SCAF1-203ENST00000598359 ZNF792Q3KQV3 632 aa16.27■□□□□ 0.2
SCAF1-203ENST00000598359 GMCL1Q96IK5 515 aa16.27■□□□□ 0.2
SCAF1-203ENST00000598359 HOMER2Q9NSB8 354 aa16.27■□□□□ 0.2
SCAF1-203ENST00000598359 SYNPO2Q9UMS6 1093 aa16.27■□□□□ 0.2
SCAF1-203ENST00000598359 ZNFX1Q9P2E3 1918 aaKnown RBP16.26■□□□□ 0.19
SCAF1-203ENST00000598359 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
SCAF1-203ENST00000598359 SYN1P17600 705 aa16.26■□□□□ 0.19
SCAF1-203ENST00000598359 COPB2P35606 906 aa16.26■□□□□ 0.19
SCAF1-203ENST00000598359 LRRC26Q2I0M4 334 aa16.26■□□□□ 0.19
SCAF1-203ENST00000598359 GJC2Q5T442 439 aaPredicted RBP16.26■□□□□ 0.19
SCAF1-203ENST00000598359 TICAM2Q86XR7 235 aa16.26■□□□□ 0.19
SCAF1-203ENST00000598359 IL25Q9H293 177 aa16.26■□□□□ 0.19
SCAF1-203ENST00000598359 ZMYM6O95789 1325 aa16.25■□□□□ 0.19
SCAF1-203ENST00000598359 NEDD4P46934 1319 aa16.25■□□□□ 0.19
SCAF1-203ENST00000598359 ATP2A1O14983 1001 aa16.25■□□□□ 0.19
SCAF1-203ENST00000598359 GSPT1P15170 499 aaKnown RBP16.25■□□□□ 0.19
SCAF1-203ENST00000598359 STAT2P52630 851 aa16.25■□□□□ 0.19
SCAF1-203ENST00000598359 CCDC96Q2M329 555 aa16.25■□□□□ 0.19
SCAF1-203ENST00000598359 AKNAD1Q5T1N1 836 aa16.25■□□□□ 0.19
SCAF1-203ENST00000598359 CCDC174Q6PII3 467 aa16.25■□□□□ 0.19
SCAF1-203ENST00000598359 STAG1Q8WVM7 1258 aa16.25■□□□□ 0.19
SCAF1-203ENST00000598359 DDX11Q96FC9 970 aa16.25■□□□□ 0.19
SCAF1-203ENST00000598359 AGBL1Q96MI9 1066 aa16.25■□□□□ 0.19
SCAF1-203ENST00000598359 TINF2Q9BSI4 451 aa16.25■□□□□ 0.19
SCAF1-203ENST00000598359 SENP6Q9GZR1 1112 aaPredicted RBP16.25■□□□□ 0.19
SCAF1-203ENST00000598359 SEPT4O43236 478 aa16.24■□□□□ 0.19
SCAF1-203ENST00000598359 MSCO60682 206 aa16.24■□□□□ 0.19
SCAF1-203ENST00000598359 NOVP48745 357 aa16.24■□□□□ 0.19
SCAF1-203ENST00000598359 ATN1P54259 1190 aaPredicted RBP16.24■□□□□ 0.19
SCAF1-203ENST00000598359 MFAP1P55081 439 aaKnown RBP16.24■□□□□ 0.19
SCAF1-203ENST00000598359 PPP4R3BQ5MIZ7 849 aa16.24■□□□□ 0.19
SCAF1-203ENST00000598359 TTBK2Q6IQ55 1244 aa16.24■□□□□ 0.19
SCAF1-203ENST00000598359 RCSD1Q6JBY9 416 aa16.24■□□□□ 0.19
SCAF1-203ENST00000598359 MFSD6Q6ZSS7 791 aa16.24■□□□□ 0.19
SCAF1-203ENST00000598359 CHURC1Q8WUH1 139 aa16.24■□□□□ 0.19
SCAF1-203ENST00000598359 LENG1Q96BZ8 264 aaPredicted RBP16.24■□□□□ 0.19
SCAF1-203ENST00000598359 TMEM47Q9BQJ4 181 aa16.24■□□□□ 0.19
SCAF1-203ENST00000598359 ZKSCAN3Q9BRR0 538 aa16.24■□□□□ 0.19
SCAF1-203ENST00000598359 PLXNA1Q9UIW2 1896 aa16.24■□□□□ 0.19
SCAF1-203ENST00000598359 ZNF536O15090 1300 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms