RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 MFSD14CQ5VZR4 134 aa19.67■□□□□ 0.74
USHBP1-208ENST00000598309 DPP9Q86TI2 863 aa19.67■□□□□ 0.74
USHBP1-208ENST00000598309 FAM160B2Q86V87 743 aa19.67■□□□□ 0.74
USHBP1-208ENST00000598309 IL25Q9H293 177 aa19.67■□□□□ 0.74
USHBP1-208ENST00000598309 SLC38A10Q9HBR0 1119 aa19.67■□□□□ 0.74
USHBP1-208ENST00000598309 ZBED4O75132 1171 aa19.66■□□□□ 0.74
USHBP1-208ENST00000598309 FARP2O94887 1054 aaPredicted RBP19.66■□□□□ 0.74
USHBP1-208ENST00000598309 IGHA2P01877 340 aa19.66■□□□□ 0.74
USHBP1-208ENST00000598309 TOP1P11387 765 aaKnown RBP19.66■□□□□ 0.74
USHBP1-208ENST00000598309 STAT2P52630 851 aa19.66■□□□□ 0.74
USHBP1-208ENST00000598309 OAZ1P54368 228 aa19.66■□□□□ 0.74
USHBP1-208ENST00000598309 IMMTQ16891 758 aaKnown RBP19.66■□□□□ 0.74
USHBP1-208ENST00000598309 PRPF38BQ5VTL8 546 aaKnown RBP19.66■□□□□ 0.74
USHBP1-208ENST00000598309 OLFML2BQ68BL8 750 aa19.66■□□□□ 0.74
USHBP1-208ENST00000598309 NPLOC4Q8TAT6 608 aa19.66■□□□□ 0.74
USHBP1-208ENST00000598309 CHURC1Q8WUH1 139 aa19.66■□□□□ 0.74
USHBP1-208ENST00000598309 ESR2Q92731 530 aa19.66■□□□□ 0.74
USHBP1-208ENST00000598309 KIFC2Q96AC6 838 aa19.66■□□□□ 0.74
USHBP1-208ENST00000598309 FLRT1Q9NZU1 646 aa19.66■□□□□ 0.74
USHBP1-208ENST00000598309 COL11A1P12107 1806 aaPredicted RBP19.66■□□□□ 0.74
USHBP1-208ENST00000598309 NEDD4P46934 1319 aa19.66■□□□□ 0.74
USHBP1-208ENST00000598309 TMEM232C9JQI7 657 aa19.65■□□□□ 0.74
USHBP1-208ENST00000598309 MCCP23508 829 aa19.65■□□□□ 0.74
USHBP1-208ENST00000598309 SNRNP48Q6IEG0 339 aaKnown RBP19.65■□□□□ 0.74
USHBP1-208ENST00000598309 ANKLE1Q8NAG6 615 aa19.65■□□□□ 0.74
USHBP1-208ENST00000598309 DCAF4Q8WV16 495 aa19.65■□□□□ 0.74
USHBP1-208ENST00000598309 TTC14Q96N46 770 aa19.65■□□□□ 0.74
USHBP1-208ENST00000598309 MMP19Q99542 508 aa19.65■□□□□ 0.74
USHBP1-208ENST00000598309 CTDP1Q9Y5B0 961 aaPredicted RBP19.65■□□□□ 0.74
USHBP1-208ENST00000598309 COBLO75128 1261 aa19.64■□□□□ 0.73
USHBP1-208ENST00000598309 TFRCP02786 760 aaKnown RBP19.64■□□□□ 0.73
USHBP1-208ENST00000598309 KCTD2Q14681 263 aa19.64■□□□□ 0.73
USHBP1-208ENST00000598309 RCSD1Q6JBY9 416 aa19.64■□□□□ 0.73
USHBP1-208ENST00000598309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.64■□□□□ 0.73
USHBP1-208ENST00000598309 TMEM47Q9BQJ4 181 aa19.64■□□□□ 0.73
USHBP1-208ENST00000598309 MKI67P46013 3256 aaKnown RBP19.63■□□□□ 0.73
USHBP1-208ENST00000598309 CCDC178Q5BJE1 867 aa19.63■□□□□ 0.73
USHBP1-208ENST00000598309 OGDHLQ9ULD0 1010 aa19.63■□□□□ 0.73
USHBP1-208ENST00000598309 ISY1Q9ULR0 285 aaKnown RBP19.63■□□□□ 0.73
USHBP1-208ENST00000598309 DIS3Q9Y2L1 958 aaKnown RBP19.63■□□□□ 0.73
USHBP1-208ENST00000598309 SGSM2O43147 1006 aa19.62■□□□□ 0.73
USHBP1-208ENST00000598309 CCND3P30281 292 aaPredicted RBP19.62■□□□□ 0.73
USHBP1-208ENST00000598309 KCTD1Q719H9 257 aa19.62■□□□□ 0.73
USHBP1-208ENST00000598309 IQCA1Q86XH1 822 aa19.62■□□□□ 0.73
USHBP1-208ENST00000598309 DGKHQ86XP1 1220 aa19.62■□□□□ 0.73
USHBP1-208ENST00000598309 KRT23Q9C075 422 aa19.62■□□□□ 0.73
USHBP1-208ENST00000598309 CNNM2Q9H8M5 875 aa19.62■□□□□ 0.73
USHBP1-208ENST00000598309 FBXO40Q9UH90 709 aa19.62■□□□□ 0.73
USHBP1-208ENST00000598309 KDM4AO75164 1064 aa19.61■□□□□ 0.73
USHBP1-208ENST00000598309 IKQ13123 557 aaPredicted RBP19.61■□□□□ 0.73
USHBP1-208ENST00000598309 CCDC96Q2M329 555 aa19.61■□□□□ 0.73
USHBP1-208ENST00000598309 CPXCR1Q8N123 301 aa19.61■□□□□ 0.73
USHBP1-208ENST00000598309 CHST13Q8NET6 341 aa19.61■□□□□ 0.73
USHBP1-208ENST00000598309 MAML3Q96JK9 1138 aa19.61■□□□□ 0.73
USHBP1-208ENST00000598309 HTATIP2Q9BUP3 242 aa19.61■□□□□ 0.73
USHBP1-208ENST00000598309 RAVER2Q9HCJ3 691 aaKnown RBP19.61■□□□□ 0.73
USHBP1-208ENST00000598309 RIPK3Q9Y572 518 aa19.61■□□□□ 0.73
USHBP1-208ENST00000598309 B4E1Z4 1266 aa19.6■□□□□ 0.73
USHBP1-208ENST00000598309 MSCO60682 206 aa19.6■□□□□ 0.73
USHBP1-208ENST00000598309 CYBAP13498 195 aa19.6■□□□□ 0.73
USHBP1-208ENST00000598309 CYP2C19P33261 490 aa19.6■□□□□ 0.73
USHBP1-208ENST00000598309 BTNL9Q6UXG8 535 aa19.6■□□□□ 0.73
USHBP1-208ENST00000598309 RASGRP2Q7LDG7 609 aa19.6■□□□□ 0.73
USHBP1-208ENST00000598309 ANKS1AQ92625 1134 aa19.6■□□□□ 0.73
USHBP1-208ENST00000598309 U3KPZ7 1027 aaPredicted RBP19.6■□□□□ 0.73
USHBP1-208ENST00000598309 ZNF536O15090 1300 aa19.59■□□□□ 0.73
USHBP1-208ENST00000598309 SNHG28P0DPA3 235 aa19.59■□□□□ 0.73
USHBP1-208ENST00000598309 PDHBP11177 359 aa19.59■□□□□ 0.73
USHBP1-208ENST00000598309 ZNF792Q3KQV3 632 aa19.59■□□□□ 0.73
USHBP1-208ENST00000598309 TKFCQ3LXA3 575 aa19.59■□□□□ 0.73
USHBP1-208ENST00000598309 BMP2KLQ5H9B9 411 aa19.59■□□□□ 0.73
USHBP1-208ENST00000598309 LHX8Q68G74 356 aa19.59■□□□□ 0.73
USHBP1-208ENST00000598309 DDX20Q9UHI6 824 aaKnown RBP19.59■□□□□ 0.73
USHBP1-208ENST00000598309 NRBP1Q9UHY1 535 aa19.59■□□□□ 0.73
USHBP1-208ENST00000598309 PRR12Q9ULL5 1215 aa19.59■□□□□ 0.73
USHBP1-208ENST00000598309 MTMR7Q9Y216 660 aa19.59■□□□□ 0.73
USHBP1-208ENST00000598309 DNAJC25-GNG10A0A024R161 153 aa19.58■□□□□ 0.72
USHBP1-208ENST00000598309 PGK2P07205 417 aa19.58■□□□□ 0.72
USHBP1-208ENST00000598309 MNX1P50219 401 aaPredicted RBP19.58■□□□□ 0.72
USHBP1-208ENST00000598309 PTH1RQ03431 593 aa19.58■□□□□ 0.72
USHBP1-208ENST00000598309 NECAB2Q7Z6G3 386 aa19.58■□□□□ 0.72
USHBP1-208ENST00000598309 MSL3Q8N5Y2 521 aaKnown RBP19.58■□□□□ 0.72
USHBP1-208ENST00000598309 CHMP4CQ96CF2 233 aa19.58■□□□□ 0.72
USHBP1-208ENST00000598309 ZSCAN10Q96SZ4 725 aaPredicted RBP19.58■□□□□ 0.72
USHBP1-208ENST00000598309 ZNF543Q08ER8 600 aa19.57■□□□□ 0.72
USHBP1-208ENST00000598309 SYDE2Q5VT97 1194 aa19.57■□□□□ 0.72
USHBP1-208ENST00000598309 TRPV1Q8NER1 839 aa19.57■□□□□ 0.72
USHBP1-208ENST00000598309 DDX11Q96FC9 970 aa19.57■□□□□ 0.72
USHBP1-208ENST00000598309 PAWRQ96IZ0 340 aaKnown RBP19.57■□□□□ 0.72
USHBP1-208ENST00000598309 ZKSCAN3Q9BRR0 538 aa19.57■□□□□ 0.72
USHBP1-208ENST00000598309 TINF2Q9BSI4 451 aa19.57■□□□□ 0.72
USHBP1-208ENST00000598309 RANBP17Q9H2T7 1088 aaKnown RBP19.57■□□□□ 0.72
USHBP1-208ENST00000598309 ACAD9Q9H845 621 aa19.57■□□□□ 0.72
USHBP1-208ENST00000598309 ZSWIM5Q9P217 1185 aa19.57■□□□□ 0.72
USHBP1-208ENST00000598309 CYP21A2P08686 494 aa19.56■□□□□ 0.72
USHBP1-208ENST00000598309 GPATCH4Q5T3I0 446 aaKnown RBP19.56■□□□□ 0.72
USHBP1-208ENST00000598309 ZNF467Q7Z7K2 595 aaPredicted RBP19.56■□□□□ 0.72
USHBP1-208ENST00000598309 ENAHQ8N8S7 591 aaPredicted RBP19.56■□□□□ 0.72
USHBP1-208ENST00000598309 DIS3LQ8TF46 1054 aaKnown RBP19.56■□□□□ 0.72
USHBP1-208ENST00000598309 CCDC136Q96JN2 1154 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms