RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 CPVLQ9H3G5 476 aa26.29■■□□□ 1.8
SNRNP70-204ENST00000595231 FAM217BQ9NTX9 383 aaPredicted RBP26.29■■□□□ 1.8
SNRNP70-204ENST00000595231 ADGRA2Q96PE1 1338 aa26.29■■□□□ 1.8
SNRNP70-204ENST00000595231 KLRF2D3W0D1 207 aa26.28■■□□□ 1.8
SNRNP70-204ENST00000595231 FAM160B2Q86V87 743 aa26.28■■□□□ 1.8
SNRNP70-204ENST00000595231 IL27Q8NEV9 243 aa26.28■■□□□ 1.8
SNRNP70-204ENST00000595231 CTCFLQ8NI51 663 aaPredicted RBP26.28■■□□□ 1.8
SNRNP70-204ENST00000595231 ATG4CQ96DT6 458 aa26.28■■□□□ 1.8
SNRNP70-204ENST00000595231 UBA5Q9GZZ9 404 aa26.28■■□□□ 1.8
SNRNP70-204ENST00000595231 ZFYVE28Q9HCC9 887 aa26.28■■□□□ 1.8
SNRNP70-204ENST00000595231 NAP1L2Q9ULW6 460 aaPredicted RBP26.28■■□□□ 1.8
SNRNP70-204ENST00000595231 GOLGA8BA8MQT2 603 aa26.28■■□□□ 1.8
SNRNP70-204ENST00000595231 TLR2O60603 784 aa26.28■■□□□ 1.8
SNRNP70-204ENST00000595231 SLC35G1Q2M3R5 365 aa26.28■■□□□ 1.8
SNRNP70-204ENST00000595231 SMCR8Q8TEV9 937 aaPredicted RBP26.28■■□□□ 1.8
SNRNP70-204ENST00000595231 KIFC2Q96AC6 838 aa26.28■■□□□ 1.8
SNRNP70-204ENST00000595231 PRR12Q9ULL5 1215 aa26.28■■□□□ 1.8
SNRNP70-204ENST00000595231 NID2Q14112 1375 aa26.27■■□□□ 1.8
SNRNP70-204ENST00000595231 TBC1D8O95759 1140 aa26.27■■□□□ 1.8
SNRNP70-204ENST00000595231 KIF5BP33176 963 aa26.27■■□□□ 1.8
SNRNP70-204ENST00000595231 SAMD1Q6SPF0 538 aaPredicted RBP26.27■■□□□ 1.8
SNRNP70-204ENST00000595231 NBPF11Q86T75 865 aa26.27■■□□□ 1.8
SNRNP70-204ENST00000595231 SAGE1Q9NXZ1 904 aa26.27■■□□□ 1.8
SNRNP70-204ENST00000595231 RBPJLQ9UBG7 517 aa26.27■■□□□ 1.8
SNRNP70-204ENST00000595231 VWA5AO00534 786 aa26.26■■□□□ 1.79
SNRNP70-204ENST00000595231 CD2BP2O95400 341 aaKnown RBP26.26■■□□□ 1.79
SNRNP70-204ENST00000595231 CDC27P30260 824 aa26.26■■□□□ 1.79
SNRNP70-204ENST00000595231 IKQ13123 557 aaPredicted RBP26.26■■□□□ 1.79
SNRNP70-204ENST00000595231 NOL8Q76FK4 1167 aaKnown RBP26.26■■□□□ 1.79
SNRNP70-204ENST00000595231 GOLGA8AA7E2F4 631 aa26.25■■□□□ 1.79
SNRNP70-204ENST00000595231 PEX10O60683 326 aa26.25■■□□□ 1.79
SNRNP70-204ENST00000595231 METAP2P50579 478 aaKnown RBP eCLIP26.25■■□□□ 1.79
SNRNP70-204ENST00000595231 SYDE2Q5VT97 1194 aa26.25■■□□□ 1.79
SNRNP70-204ENST00000595231 C17orf99Q6UX52 265 aa26.25■■□□□ 1.79
SNRNP70-204ENST00000595231 TXNRD2Q9NNW7 524 aa26.25■■□□□ 1.79
SNRNP70-204ENST00000595231 A0A0G2JMZ2 1700 aa26.25■■□□□ 1.79
SNRNP70-204ENST00000595231 CYTH3O43739 400 aa26.25■■□□□ 1.79
SNRNP70-204ENST00000595231 ST18O60284 1047 aa26.25■■□□□ 1.79
SNRNP70-204ENST00000595231 PLEKHA8P1O95397 391 aa26.25■■□□□ 1.79
SNRNP70-204ENST00000595231 ADD1P35611 737 aaKnown RBP26.25■■□□□ 1.79
SNRNP70-204ENST00000595231 GCLCP48506 637 aaPredicted RBP26.25■■□□□ 1.79
SNRNP70-204ENST00000595231 ME3Q16798 604 aa26.25■■□□□ 1.79
SNRNP70-204ENST00000595231 RTN1Q16799 776 aa26.25■■□□□ 1.79
SNRNP70-204ENST00000595231 ADGRF4Q8IZF3 695 aa26.25■■□□□ 1.79
SNRNP70-204ENST00000595231 REPS2Q8NFH8 660 aa26.25■■□□□ 1.79
SNRNP70-204ENST00000595231 COL11A1P12107 1806 aaPredicted RBP26.24■■□□□ 1.79
SNRNP70-204ENST00000595231 CNMDO75829 334 aa26.24■■□□□ 1.79
SNRNP70-204ENST00000595231 LARGE1O95461 756 aa26.24■■□□□ 1.79
SNRNP70-204ENST00000595231 PPP2R5BQ15173 497 aa26.24■■□□□ 1.79
SNRNP70-204ENST00000595231 CMTR1Q8N1G2 835 aaKnown RBP26.24■■□□□ 1.79
SNRNP70-204ENST00000595231 SRBD1Q8N5C6 995 aaKnown RBP26.24■■□□□ 1.79
SNRNP70-204ENST00000595231 RIOX1Q9H6W3 641 aa26.24■■□□□ 1.79
SNRNP70-204ENST00000595231 SLC38A10Q9HBR0 1119 aa26.24■■□□□ 1.79
SNRNP70-204ENST00000595231 RBM28Q9NW13 759 aaKnown RBP26.24■■□□□ 1.79
SNRNP70-204ENST00000595231 BTBD7Q9P203 1132 aa26.24■■□□□ 1.79
SNRNP70-204ENST00000595231 CPA4Q9UI42 421 aa26.24■■□□□ 1.79
SNRNP70-204ENST00000595231 LIMCH1Q9UPQ0 1083 aa26.24■■□□□ 1.79
SNRNP70-204ENST00000595231 BAZ2BQ9UIF8 2168 aaKnown RBP26.23■■□□□ 1.79
SNRNP70-204ENST00000595231 BCRP11274 1271 aa26.23■■□□□ 1.79
SNRNP70-204ENST00000595231 GNAQP50148 359 aa26.23■■□□□ 1.79
SNRNP70-204ENST00000595231 CCT2P78371 535 aaKnown RBP26.23■■□□□ 1.79
SNRNP70-204ENST00000595231 STK3Q13188 491 aa26.23■■□□□ 1.79
SNRNP70-204ENST00000595231 TMTC3Q6ZXV5 915 aa26.23■■□□□ 1.79
SNRNP70-204ENST00000595231 GTF3C2Q8WUA4 911 aaPredicted RBP26.23■■□□□ 1.79
SNRNP70-204ENST00000595231 BEGAINQ9BUH8 593 aa26.23■■□□□ 1.79
SNRNP70-204ENST00000595231 JMJD4Q9H9V9 463 aa26.23■■□□□ 1.79
SNRNP70-204ENST00000595231 NCOA5Q9HCD5 579 aaKnown RBP26.23■■□□□ 1.79
SNRNP70-204ENST00000595231 RABGAP1Q9Y3P9 1069 aa26.23■■□□□ 1.79
SNRNP70-204ENST00000595231 SMARCA1P28370 1054 aa26.22■■□□□ 1.79
SNRNP70-204ENST00000595231 FUT2Q10981 343 aa26.22■■□□□ 1.79
SNRNP70-204ENST00000595231 ANKRD13CQ8N6S4 541 aa26.22■■□□□ 1.79
SNRNP70-204ENST00000595231 MB21D1Q8N884 522 aa26.22■■□□□ 1.79
SNRNP70-204ENST00000595231 PFKFB2O60825 505 aa26.22■■□□□ 1.79
SNRNP70-204ENST00000595231 SNAP25P60880 206 aa26.22■■□□□ 1.79
SNRNP70-204ENST00000595231 TMEM132BQ14DG7 1078 aa26.22■■□□□ 1.79
SNRNP70-204ENST00000595231 Q3C1V9 767 aa26.22■■□□□ 1.79
SNRNP70-204ENST00000595231 LZTS2Q9BRK4 669 aa26.22■■□□□ 1.79
SNRNP70-204ENST00000595231 RANBP17Q9H2T7 1088 aaKnown RBP26.22■■□□□ 1.79
SNRNP70-204ENST00000595231 VAT1LQ9HCJ6 419 aa26.22■■□□□ 1.79
SNRNP70-204ENST00000595231 MORF4L1Q9UBU8 362 aa26.22■■□□□ 1.79
SNRNP70-204ENST00000595231 FDX1P10109 184 aa26.21■■□□□ 1.79
SNRNP70-204ENST00000595231 SCRN1Q12765 414 aa26.21■■□□□ 1.79
SNRNP70-204ENST00000595231 MTMR8Q96EF0 704 aa26.21■■□□□ 1.79
SNRNP70-204ENST00000595231 PAGR1Q9BTK6 254 aa26.21■■□□□ 1.79
SNRNP70-204ENST00000595231 SPZ1Q9BXG8 430 aa26.21■■□□□ 1.79
SNRNP70-204ENST00000595231 ZNF214Q9UL59 606 aaPredicted RBP26.21■■□□□ 1.79
SNRNP70-204ENST00000595231 ZNF536O15090 1300 aa26.2■■□□□ 1.78
SNRNP70-204ENST00000595231 CCDC196A0A1B0GTZ2 297 aa26.2■■□□□ 1.78
SNRNP70-204ENST00000595231 NTRK3Q16288 839 aa26.2■■□□□ 1.78
SNRNP70-204ENST00000595231 FAM110CQ1W6H9 321 aa26.2■■□□□ 1.78
SNRNP70-204ENST00000595231 CCDC82Q8N4S0 544 aa26.2■■□□□ 1.78
SNRNP70-204ENST00000595231 SLKQ9H2G2 1235 aaPredicted RBP26.2■■□□□ 1.78
SNRNP70-204ENST00000595231 ZBED4O75132 1171 aa26.19■■□□□ 1.78
SNRNP70-204ENST00000595231 ERVK-9P63128 1117 aa26.19■■□□□ 1.78
SNRNP70-204ENST00000595231 ERVK-24P63145 666 aa26.19■■□□□ 1.78
SNRNP70-204ENST00000595231 TSKSQ9UJT2 592 aa26.19■■□□□ 1.78
SNRNP70-204ENST00000595231 ATP2A1O14983 1001 aa26.19■■□□□ 1.78
SNRNP70-204ENST00000595231 NECAB1Q8N987 351 aa26.19■■□□□ 1.78
SNRNP70-204ENST00000595231 GPRC5AQ8NFJ5 357 aa26.19■■□□□ 1.78
SNRNP70-204ENST00000595231 DHX16O60231 1041 aaKnown RBP26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms