RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 PGK2P07205 417 aa11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 ZNF865P0CJ78 1059 aaPredicted RBP11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 IGFBP4P22692 258 aa11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 PPIGQ13427 754 aaKnown RBP eCLIP11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 ZNF792Q3KQV3 632 aa11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 MFSD5Q6N075 450 aa11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 CTR9Q6PD62 1173 aa11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 C16orf86Q6ZW13 317 aa11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 KIF1BPQ96EK5 621 aa11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 TINF2Q9BSI4 451 aa11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 TSEN34Q9BSV6 310 aaKnown RBP11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 STARD7Q9NQZ5 370 aa11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 SWAP70Q9UH65 585 aa11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 ZNF214Q9UL59 606 aaPredicted RBP11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 APBB1O00213 710 aa11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 VWA5AO00534 786 aa11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 EEF2P13639 858 aaKnown RBP11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 AKR1A1P14550 325 aa11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 ATP5JP18859 108 aa11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 ACLYP53396 1101 aa11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 HNRNPUQ00839 825 aaKnown RBP eCLIP11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 ICA1Q05084 483 aa11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 CCSAPQ6IQ19 270 aaPredicted RBP11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 RIOX2Q8IUF8 465 aa11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 RPAP2Q8IXW5 612 aaPredicted RBP11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 CLASRPQ8N2M8 674 aaKnown RBP11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 NUP133Q8WUM0 1156 aa11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 MMP19Q99542 508 aa11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 HAUS7Q99871 368 aa11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 C1QTNF1Q9BXJ1 281 aa11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 PUS7LQ9H0K6 701 aaKnown RBP11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 BOLA2Q9H3K6 86 aa11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 ATP8A2Q9NTI2 1148 aa11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 PAG1Q9NWQ8 432 aa11.73□□□□□ -0.53
NOTCH3-202ENST00000595045 NAV1Q8NEY1 1877 aa11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 SYNRGQ9UMZ2 1314 aa11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 WDR46O15213 610 aaKnown RBP11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 SLC25A27O95847 323 aa11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 ACRP10323 421 aa11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 BMP1P13497 986 aa11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 CSF2RAP15509 400 aa11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 UBE3CQ15386 1083 aa11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 KCNA10Q16322 511 aa11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 HSP90AB4PQ58FF6 505 aa11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 CCDC174Q6PII3 467 aa11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 SAMD1Q6SPF0 538 aaPredicted RBP11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 ZNF365Q70YC5 407 aa11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 KLHDC9Q8NEP7 349 aa11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 CCDC17Q96LX7 622 aa11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 FGD4Q96M96 766 aa11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 CXXC1Q9P0U4 656 aaPredicted RBP11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 PPP1R9AQ9ULJ8 1098 aa11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 RIPK3Q9Y572 518 aa11.72□□□□□ -0.53
NOTCH3-202ENST00000595045 SYNGAP1Q96PV0 1343 aa11.71□□□□□ -0.53
NOTCH3-202ENST00000595045 MCM3APO60318 1980 aa11.71□□□□□ -0.53
NOTCH3-202ENST00000595045 MYH8P13535 1937 aa11.71□□□□□ -0.53
NOTCH3-202ENST00000595045 MOXD2PA6NHM9 499 aa11.71□□□□□ -0.53
NOTCH3-202ENST00000595045 SNAI1O95863 264 aaPredicted RBP11.71□□□□□ -0.53
NOTCH3-202ENST00000595045 CDK7P50613 346 aa11.71□□□□□ -0.53
NOTCH3-202ENST00000595045 IRX5P78411 483 aaPredicted RBP11.71□□□□□ -0.53
NOTCH3-202ENST00000595045 RAB30Q15771 203 aa11.71□□□□□ -0.53
NOTCH3-202ENST00000595045 PSRC1Q6PGN9 363 aaPredicted RBP11.71□□□□□ -0.53
NOTCH3-202ENST00000595045 NKX2-4Q9H2Z4 354 aa11.71□□□□□ -0.53
NOTCH3-202ENST00000595045 MSRAQ9UJ68 235 aa11.71□□□□□ -0.53
NOTCH3-202ENST00000595045 DIS3Q9Y2L1 958 aaKnown RBP11.71□□□□□ -0.53
NOTCH3-202ENST00000595045 WDFY4Q6ZS81 3184 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 ELP1O95163 1332 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 MROH7Q68CQ1 1323 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 DNAJC25-GNG10A0A024R161 153 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 IGKV6D-41A0A0C4DH26 115 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 MYADML2A6NDP7 307 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 ADCY6O43306 1168 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 RAB11FIP3O75154 756 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 IFIT2P09913 472 aaKnown RBP11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 RASA1P20936 1047 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 STAT3P40763 770 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 TFF2Q03403 129 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 FAM83BQ5T0W9 1011 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 DIEXFQ68CQ4 756 aaKnown RBP11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 TMEM199Q8N511 208 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 HERVK_113Q902F9 699 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 STRBPQ96SI9 672 aaKnown RBP11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 NUP88Q99567 741 aaPredicted RBP11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 PPP1R12CQ9BZL4 782 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 KANSL2Q9H9L4 492 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 ARHGEF10LQ9HCE6 1279 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 CNPY2Q9Y2B0 182 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 YBX2Q9Y2T7 364 aaKnown RBP11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 COG6Q9Y2V7 657 aa11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 ARIH1Q9Y4X5 557 aaPredicted RBP11.7□□□□□ -0.54
NOTCH3-202ENST00000595045 GSG1L2A8MUP6 293 aa11.69□□□□□ -0.54
NOTCH3-202ENST00000595045 KCTD2Q14681 263 aa11.69□□□□□ -0.54
NOTCH3-202ENST00000595045 MAMDC4Q6UXC1 1216 aa11.69□□□□□ -0.54
NOTCH3-202ENST00000595045 GLT1D1Q96MS3 346 aa11.69□□□□□ -0.54
NOTCH3-202ENST00000595045 LRFN3Q9BTN0 628 aa11.69□□□□□ -0.54
NOTCH3-202ENST00000595045 TSPYL2Q9H2G4 693 aaPredicted RBP11.69□□□□□ -0.54
NOTCH3-202ENST00000595045 SLC28A3Q9HAS3 691 aa11.69□□□□□ -0.54
NOTCH3-202ENST00000595045 FAM184BQ9ULE4 1060 aa11.69□□□□□ -0.54
NOTCH3-202ENST00000595045 SLC4A4Q9Y6R1 1079 aa11.69□□□□□ -0.54
NOTCH3-202ENST00000595045 ARVCFO00192 962 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms