RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 NLRP12P59046 1061 aa19.36■□□□□ 0.69
SHKBP1-205ENST00000594973 CEP95Q96GE4 821 aa19.36■□□□□ 0.69
SHKBP1-205ENST00000594973 USP40Q9NVE5 1235 aa19.36■□□□□ 0.69
SHKBP1-205ENST00000594973 COL11A2P13942 1736 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-205ENST00000594973 CDK5RAP2Q96SN8 1893 aa19.36■□□□□ 0.69
SHKBP1-205ENST00000594973 SLC35G1Q2M3R5 365 aa19.36■□□□□ 0.69
SHKBP1-205ENST00000594973 NEDD1Q8NHV4 660 aa19.36■□□□□ 0.69
SHKBP1-205ENST00000594973 SUGT1Q9Y2Z0 365 aa19.36■□□□□ 0.69
SHKBP1-205ENST00000594973 CYTH3O43739 400 aa19.35■□□□□ 0.69
SHKBP1-205ENST00000594973 KCNJ6P48051 423 aa19.35■□□□□ 0.69
SHKBP1-205ENST00000594973 EZH2Q15910 746 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-205ENST00000594973 TTC38Q5R3I4 469 aa19.35■□□□□ 0.69
SHKBP1-205ENST00000594973 GNAQP50148 359 aa19.35■□□□□ 0.69
SHKBP1-205ENST00000594973 EN1Q05925 392 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-205ENST00000594973 SYT10Q6XYQ8 523 aa19.35■□□□□ 0.69
SHKBP1-205ENST00000594973 HEATR3Q7Z4Q2 680 aa19.35■□□□□ 0.69
SHKBP1-205ENST00000594973 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.35■□□□□ 0.69
SHKBP1-205ENST00000594973 DDX60LQ5H9U9 1706 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-205ENST00000594973 TPM1P09493 284 aa19.34■□□□□ 0.69
SHKBP1-205ENST00000594973 CASQ1P31415 396 aa19.34■□□□□ 0.69
SHKBP1-205ENST00000594973 DHX8Q14562 1220 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-205ENST00000594973 TYW1BQ6NUM6 668 aa19.34■□□□□ 0.69
SHKBP1-205ENST00000594973 ZNF579Q8NAF0 562 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-205ENST00000594973 PSDA5PKW4 1024 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-205ENST00000594973 KLRF2D3W0D1 207 aa19.34■□□□□ 0.69
SHKBP1-205ENST00000594973 ARID5BQ14865 1188 aa19.34■□□□□ 0.69
SHKBP1-205ENST00000594973 ARHGAP29Q52LW3 1261 aa19.34■□□□□ 0.69
SHKBP1-205ENST00000594973 USP17L2Q6R6M4 530 aa19.34■□□□□ 0.69
SHKBP1-205ENST00000594973 FOXP4Q8IVH2 680 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-205ENST00000594973 NEK11Q8NG66 645 aa19.34■□□□□ 0.69
SHKBP1-205ENST00000594973 RASGRP4Q8TDF6 673 aa19.34■□□□□ 0.69
SHKBP1-205ENST00000594973 EPSTI1Q96J88 318 aa19.34■□□□□ 0.69
SHKBP1-205ENST00000594973 TRMT1Q9NXH9 659 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-205ENST00000594973 SERTAD1Q9UHV2 236 aa19.34■□□□□ 0.69
SHKBP1-205ENST00000594973 TUBE1Q9UJT0 475 aa19.34■□□□□ 0.69
SHKBP1-205ENST00000594973 PALM3A6NDB9 673 aaPredicted RBP19.33■□□□□ 0.69
SHKBP1-205ENST00000594973 MYO1CO00159 1063 aa19.33■□□□□ 0.69
SHKBP1-205ENST00000594973 KIAA0825Q8IV33 1275 aa19.33■□□□□ 0.69
SHKBP1-205ENST00000594973 TEKT1Q969V4 418 aa19.33■□□□□ 0.69
SHKBP1-205ENST00000594973 PCDHA5Q9Y5H7 936 aa19.33■□□□□ 0.69
SHKBP1-205ENST00000594973 EIF6P56537 245 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-205ENST00000594973 PTGDRQ13258 359 aa19.33■□□□□ 0.68
SHKBP1-205ENST00000594973 ZSCAN26Q16670 478 aa19.33■□□□□ 0.68
SHKBP1-205ENST00000594973 WWC2Q6AWC2 1192 aa19.33■□□□□ 0.68
SHKBP1-205ENST00000594973 CDC42EP5Q6NZY7 148 aa19.33■□□□□ 0.68
SHKBP1-205ENST00000594973 GRAMD1CQ8IYS0 662 aa19.33■□□□□ 0.68
SHKBP1-205ENST00000594973 BLIDQ8IZY5 108 aa19.33■□□□□ 0.68
SHKBP1-205ENST00000594973 PSD3Q9NYI0 1048 aa19.33■□□□□ 0.68
SHKBP1-205ENST00000594973 IMPACTQ9P2X3 320 aa19.33■□□□□ 0.68
SHKBP1-205ENST00000594973 MYH1P12882 1939 aa19.32■□□□□ 0.68
SHKBP1-205ENST00000594973 PARP1P09874 1014 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-205ENST00000594973 CALML3P27482 149 aa19.32■□□□□ 0.68
SHKBP1-205ENST00000594973 MCM7P33993 719 aa19.32■□□□□ 0.68
SHKBP1-205ENST00000594973 SLC15A2Q16348 729 aa19.32■□□□□ 0.68
SHKBP1-205ENST00000594973 PODNQ7Z5L7 613 aa19.32■□□□□ 0.68
SHKBP1-205ENST00000594973 HOMER1Q86YM7 354 aa19.32■□□□□ 0.68
SHKBP1-205ENST00000594973 SRRTQ9BXP5 876 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-205ENST00000594973 OSBPL5Q9H0X9 879 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-205ENST00000594973 VWA3AA6NCI4 1184 aa19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 APOBEC3HQ6NTF7 200 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 CLEC10AQ8IUN9 316 aa19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 BPIFA3Q9BQP9 254 aa19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 VAT1LQ9HCJ6 419 aa19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 PCDHAC2Q9Y5I4 1007 aa19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 PRR29P0C7W0 189 aa19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 TOP1P11387 765 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 AKR1B1P15121 316 aa19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 CACNB3P54284 484 aa19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 MDM2Q00987 491 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 NFIAQ12857 509 aa19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 POSTNQ15063 836 aa19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 IQUBQ8NA54 791 aa19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 GOLGA5Q8TBA6 731 aa19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 SYMPKQ92797 1274 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 HOOK1Q9UJC3 728 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 PCDHA4Q9UN74 947 aa19.31■□□□□ 0.68
SHKBP1-205ENST00000594973 SLURP2P0DP57 97 aa19.3■□□□□ 0.68
SHKBP1-205ENST00000594973 CRKP46108 304 aa19.3■□□□□ 0.68
SHKBP1-205ENST00000594973 STYK1Q6J9G0 422 aa19.3■□□□□ 0.68
SHKBP1-205ENST00000594973 UBXN4Q92575 508 aa19.3■□□□□ 0.68
SHKBP1-205ENST00000594973 SMARCE1Q969G3 411 aa19.3■□□□□ 0.68
SHKBP1-205ENST00000594973 DHX58Q96C10 678 aa19.3■□□□□ 0.68
SHKBP1-205ENST00000594973 SH3GLB2Q9NR46 395 aa19.3■□□□□ 0.68
SHKBP1-205ENST00000594973 SERPINB13Q9UIV8 391 aa19.3■□□□□ 0.68
SHKBP1-205ENST00000594973 USP17L5A8MUK1 530 aa19.3■□□□□ 0.68
SHKBP1-205ENST00000594973 BMP15O95972 392 aa19.3■□□□□ 0.68
SHKBP1-205ENST00000594973 RBM5P52756 815 aaKnown RBP eCLIP19.3■□□□□ 0.68
SHKBP1-205ENST00000594973 GABPAQ06546 454 aa19.3■□□□□ 0.68
SHKBP1-205ENST00000594973 POTEAQ6S8J7 498 aa19.3■□□□□ 0.68
SHKBP1-205ENST00000594973 HHIPL2Q6UWX4 724 aa19.3■□□□□ 0.68
SHKBP1-205ENST00000594973 LRRC47Q8N1G4 583 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-205ENST00000594973 ZFP91Q96JP5 570 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-205ENST00000594973 RGS17Q9UGC6 210 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-205ENST00000594973 A0A087X0B3 334 aa19.29■□□□□ 0.68
SHKBP1-205ENST00000594973 POLR3GO15318 223 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-205ENST00000594973 ECE2O60344 883 aa19.29■□□□□ 0.68
SHKBP1-205ENST00000594973 ATP2C1P98194 919 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-205ENST00000594973 FERMT2Q96AC1 680 aa19.29■□□□□ 0.68
SHKBP1-205ENST00000594973 PPP1R13BQ96KQ4 1090 aa19.29■□□□□ 0.68
SHKBP1-205ENST00000594973 BARHL2Q9NY43 387 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms