RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CAPN11Q9UMQ6 739 aa14.9□□□□□ -0.02
VRK3-209ENST00000594948 REXO2Q9Y3B8 237 aaKnown RBP14.9□□□□□ -0.02
VRK3-209ENST00000594948 COL14A1Q05707 1796 aaKnown RBP14.9□□□□□ -0.02
VRK3-209ENST00000594948 ZBTB22O15209 634 aa14.89□□□□□ -0.03
VRK3-209ENST00000594948 EIF5P55010 431 aaKnown RBP14.89□□□□□ -0.03
VRK3-209ENST00000594948 KRT83P78385 493 aa14.89□□□□□ -0.03
VRK3-209ENST00000594948 UBXN1Q04323 297 aa14.89□□□□□ -0.03
VRK3-209ENST00000594948 MEA1Q16626 185 aa14.89□□□□□ -0.03
VRK3-209ENST00000594948 SRLQ86TD4 932 aa14.89□□□□□ -0.03
VRK3-209ENST00000594948 RETREG2Q8NC44 543 aa14.89□□□□□ -0.03
VRK3-209ENST00000594948 SDR42E1Q8WUS8 393 aa14.89□□□□□ -0.03
VRK3-209ENST00000594948 NUP58Q9BVL2 599 aa14.89□□□□□ -0.03
VRK3-209ENST00000594948 BLZF1Q9H2G9 400 aa14.89□□□□□ -0.03
VRK3-209ENST00000594948 GYS2P54840 703 aa14.89□□□□□ -0.03
VRK3-209ENST00000594948 C4orf32Q8N8J7 132 aa14.89□□□□□ -0.03
VRK3-209ENST00000594948 NOA1Q8NC60 698 aaKnown RBP14.89□□□□□ -0.03
VRK3-209ENST00000594948 ZNF507Q8TCN5 953 aa14.89□□□□□ -0.03
VRK3-209ENST00000594948 FAN1Q9Y2M0 1017 aa14.89□□□□□ -0.03
VRK3-209ENST00000594948 LUC7L2Q9Y383 392 aaKnown RBP14.89□□□□□ -0.03
VRK3-209ENST00000594948 ANO9A1A5B4 782 aa14.88□□□□□ -0.03
VRK3-209ENST00000594948 SNAP23O00161 211 aa14.88□□□□□ -0.03
VRK3-209ENST00000594948 ABL1P00519 1130 aa14.88□□□□□ -0.03
VRK3-209ENST00000594948 PRCPP42785 496 aa14.88□□□□□ -0.03
VRK3-209ENST00000594948 DNM2P50570 870 aa14.88□□□□□ -0.03
VRK3-209ENST00000594948 NLRP5P59047 1200 aa14.88□□□□□ -0.03
VRK3-209ENST00000594948 CHRNDQ07001 517 aa14.88□□□□□ -0.03
VRK3-209ENST00000594948 STIM1Q13586 685 aa14.88□□□□□ -0.03
VRK3-209ENST00000594948 IL17AQ16552 155 aa14.88□□□□□ -0.03
VRK3-209ENST00000594948 TSR1Q2NL82 804 aaKnown RBP14.88□□□□□ -0.03
VRK3-209ENST00000594948 IRF2BP1Q8IU81 584 aa14.88□□□□□ -0.03
VRK3-209ENST00000594948 SRBD1Q8N5C6 995 aaKnown RBP14.88□□□□□ -0.03
VRK3-209ENST00000594948 RUBCNQ92622 972 aa14.88□□□□□ -0.03
VRK3-209ENST00000594948 IQCDQ96DY2 449 aa14.88□□□□□ -0.03
VRK3-209ENST00000594948 CHP1Q99653 195 aa14.88□□□□□ -0.03
VRK3-209ENST00000594948 RASSF4Q9H2L5 321 aa14.88□□□□□ -0.03
VRK3-209ENST00000594948 MAGEF1Q9HAY2 307 aa14.88□□□□□ -0.03
VRK3-209ENST00000594948 SAR1BQ9Y6B6 198 aa14.88□□□□□ -0.03
VRK3-209ENST00000594948 COL1A1P02452 1464 aaPredicted RBP14.88□□□□□ -0.03
VRK3-209ENST00000594948 TTC26A0AVF1 554 aa14.87□□□□□ -0.03
VRK3-209ENST00000594948 CDC25AP30304 524 aa14.87□□□□□ -0.03
VRK3-209ENST00000594948 CYLC1P35663 651 aaPredicted RBP14.87□□□□□ -0.03
VRK3-209ENST00000594948 PPP1R2P41236 205 aa14.87□□□□□ -0.03
VRK3-209ENST00000594948 STAT6P42226 847 aa14.87□□□□□ -0.03
VRK3-209ENST00000594948 UBE4AQ14139 1066 aa14.87□□□□□ -0.03
VRK3-209ENST00000594948 NOM1Q5C9Z4 860 aaKnown RBP14.87□□□□□ -0.03
VRK3-209ENST00000594948 PIK3AP1Q6ZUJ8 805 aa14.87□□□□□ -0.03
VRK3-209ENST00000594948 CCDC170Q8IYT3 715 aa14.87□□□□□ -0.03
VRK3-209ENST00000594948 BBXQ8WY36 941 aaPredicted RBP14.87□□□□□ -0.03
VRK3-209ENST00000594948 STAMQ92783 540 aa14.87□□□□□ -0.03
VRK3-209ENST00000594948 ROBO1Q9Y6N7 1651 aa14.87□□□□□ -0.03
VRK3-209ENST00000594948 LRRIQ3A6PVS8 624 aaPredicted RBP14.87□□□□□ -0.03
VRK3-209ENST00000594948 MYO1CO00159 1063 aa14.87□□□□□ -0.03
VRK3-209ENST00000594948 KRT86O43790 486 aa14.87□□□□□ -0.03
VRK3-209ENST00000594948 RHOBTB3O94955 611 aa14.87□□□□□ -0.03
VRK3-209ENST00000594948 HERVK_113P62684 666 aa14.87□□□□□ -0.03
VRK3-209ENST00000594948 CDK17Q00537 523 aa14.87□□□□□ -0.03
VRK3-209ENST00000594948 CCSER1Q9C0I3 900 aa14.87□□□□□ -0.03
VRK3-209ENST00000594948 CUEDC2Q9H467 287 aa14.87□□□□□ -0.03
VRK3-209ENST00000594948 DISC1Q9NRI5 854 aa14.87□□□□□ -0.03
VRK3-209ENST00000594948 RRP15Q9Y3B9 282 aaKnown RBP14.87□□□□□ -0.03
VRK3-209ENST00000594948 hCG_1642624A0A1W2PR95 340 aa14.86□□□□□ -0.03
VRK3-209ENST00000594948 EIF3CLB5ME19 914 aaKnown RBP14.86□□□□□ -0.03
VRK3-209ENST00000594948 LAD1O00515 517 aa14.86□□□□□ -0.03
VRK3-209ENST00000594948 PSMA7O14818 248 aa14.86□□□□□ -0.03
VRK3-209ENST00000594948 N4BP1O75113 896 aaKnown RBP14.86□□□□□ -0.03
VRK3-209ENST00000594948 NTSR2O95665 410 aa14.86□□□□□ -0.03
VRK3-209ENST00000594948 SRGNP10124 158 aa14.86□□□□□ -0.03
VRK3-209ENST00000594948 KIF5BP33176 963 aa14.86□□□□□ -0.03
VRK3-209ENST00000594948 FIGNQ5HY92 759 aa14.86□□□□□ -0.03
VRK3-209ENST00000594948 NCAPH2Q6IBW4 605 aa14.86□□□□□ -0.03
VRK3-209ENST00000594948 IQCEQ6IPM2 695 aa14.86□□□□□ -0.03
VRK3-209ENST00000594948 CTR9Q6PD62 1173 aa14.86□□□□□ -0.03
VRK3-209ENST00000594948 BLIDQ8IZY5 108 aa14.86□□□□□ -0.03
VRK3-209ENST00000594948 CCDC102AQ96A19 550 aa14.86□□□□□ -0.03
VRK3-209ENST00000594948 DHTKD1Q96HY7 919 aaPredicted RBP14.86□□□□□ -0.03
VRK3-209ENST00000594948 EIF3CQ99613 913 aaKnown RBP14.86□□□□□ -0.03
VRK3-209ENST00000594948 MAGEC2Q9UBF1 373 aaPredicted RBP14.86□□□□□ -0.03
VRK3-209ENST00000594948 GUCA1BQ9UMX6 200 aa14.86□□□□□ -0.03
VRK3-209ENST00000594948 GDAQ9Y2T3 454 aa14.86□□□□□ -0.03
VRK3-209ENST00000594948 KAT6BQ8WYB5 2073 aa14.85□□□□□ -0.03
VRK3-209ENST00000594948 MCM7P33993 719 aa14.85□□□□□ -0.03
VRK3-209ENST00000594948 SBK1Q52WX2 424 aa14.85□□□□□ -0.03
VRK3-209ENST00000594948 GALNT17Q6IS24 598 aa14.85□□□□□ -0.03
VRK3-209ENST00000594948 WDR59Q6PJI9 974 aa14.85□□□□□ -0.03
VRK3-209ENST00000594948 DAGLBQ8NCG7 672 aa14.85□□□□□ -0.03
VRK3-209ENST00000594948 GIMAP8Q8ND71 665 aaPredicted RBP14.85□□□□□ -0.03
VRK3-209ENST00000594948 PURBQ96QR8 312 aaKnown RBP14.85□□□□□ -0.03
VRK3-209ENST00000594948 TTYH3Q9C0H2 523 aa14.85□□□□□ -0.03
VRK3-209ENST00000594948 SUGCTQ9HAC7 445 aa14.85□□□□□ -0.03
VRK3-209ENST00000594948 ABCF2Q9UG63 623 aa14.85□□□□□ -0.03
VRK3-209ENST00000594948 A0A0U1RQG5 324 aaPredicted RBP14.85□□□□□ -0.03
VRK3-209ENST00000594948 A0A1W2PQJ5 194 aa14.85□□□□□ -0.03
VRK3-209ENST00000594948 KLRC4O43908 158 aa14.85□□□□□ -0.03
VRK3-209ENST00000594948 PRPF6O94906 941 aaKnown RBP14.85□□□□□ -0.03
VRK3-209ENST00000594948 ITIH3Q06033 890 aa14.85□□□□□ -0.03
VRK3-209ENST00000594948 CCDC122Q5T0U0 273 aa14.85□□□□□ -0.03
VRK3-209ENST00000594948 FAM114A1Q8IWE2 563 aa14.85□□□□□ -0.03
VRK3-209ENST00000594948 GOLGA6L1Q8N7Z2 621 aa14.85□□□□□ -0.03
VRK3-209ENST00000594948 JAKMIP2Q96AA8 810 aa14.85□□□□□ -0.03
VRK3-209ENST00000594948 EXOC1Q9NV70 894 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms