RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 CYP2C19P33261 490 aa17.42■□□□□ 0.38
USE1-205ENST00000594724 MFSD14CQ5VZR4 134 aa17.42■□□□□ 0.38
USE1-205ENST00000594724 SNRNP48Q6IEG0 339 aaKnown RBP17.42■□□□□ 0.38
USE1-205ENST00000594724 KCTD1Q719H9 257 aa17.42■□□□□ 0.38
USE1-205ENST00000594724 UBE2Q1Q7Z7E8 422 aa17.42■□□□□ 0.38
USE1-205ENST00000594724 ABRAQ8N0Z2 381 aa17.42■□□□□ 0.38
USE1-205ENST00000594724 GMCL1Q96IK5 515 aa17.42■□□□□ 0.38
USE1-205ENST00000594724 CRISPLD2Q9H0B8 497 aa17.42■□□□□ 0.38
USE1-205ENST00000594724 RNF41Q9H4P4 317 aaPredicted RBP17.42■□□□□ 0.38
USE1-205ENST00000594724 RAVER2Q9HCJ3 691 aaKnown RBP17.42■□□□□ 0.38
USE1-205ENST00000594724 TCP11L1Q9NUJ3 509 aa17.42■□□□□ 0.38
USE1-205ENST00000594724 CTDP1Q9Y5B0 961 aaPredicted RBP17.42■□□□□ 0.38
USE1-205ENST00000594724 FARP2O94887 1054 aaPredicted RBP17.41■□□□□ 0.38
USE1-205ENST00000594724 PCP11498 1178 aaKnown RBP17.41■□□□□ 0.38
USE1-205ENST00000594724 IKQ13123 557 aaPredicted RBP17.41■□□□□ 0.38
USE1-205ENST00000594724 IMMTQ16891 758 aaKnown RBP17.41■□□□□ 0.38
USE1-205ENST00000594724 RCSD1Q6JBY9 416 aa17.41■□□□□ 0.38
USE1-205ENST00000594724 CHURC1Q8WUH1 139 aa17.41■□□□□ 0.38
USE1-205ENST00000594724 RUFY2Q8WXA3 655 aa17.41■□□□□ 0.38
USE1-205ENST00000594724 MMP19Q99542 508 aa17.41■□□□□ 0.38
USE1-205ENST00000594724 TMEM47Q9BQJ4 181 aa17.41■□□□□ 0.38
USE1-205ENST00000594724 ZKSCAN3Q9BRR0 538 aa17.41■□□□□ 0.38
USE1-205ENST00000594724 SLC38A10Q9HBR0 1119 aa17.41■□□□□ 0.38
USE1-205ENST00000594724 CTNNA3Q9UI47 895 aa17.41■□□□□ 0.38
USE1-205ENST00000594724 PGK2P07205 417 aa17.4■□□□□ 0.38
USE1-205ENST00000594724 TOP1P11387 765 aaKnown RBP17.4■□□□□ 0.38
USE1-205ENST00000594724 STAT2P52630 851 aa17.4■□□□□ 0.38
USE1-205ENST00000594724 PTH1RQ03431 593 aa17.4■□□□□ 0.38
USE1-205ENST00000594724 ESR2Q92731 530 aa17.4■□□□□ 0.38
USE1-205ENST00000594724 TEX13BQ9BXU2 312 aa17.4■□□□□ 0.38
USE1-205ENST00000594724 B4E1Z4 1266 aa17.39■□□□□ 0.37
USE1-205ENST00000594724 ATP2A1O14983 1001 aa17.39■□□□□ 0.37
USE1-205ENST00000594724 KDM4AO75164 1064 aa17.39■□□□□ 0.37
USE1-205ENST00000594724 IGHA2P01877 340 aa17.39■□□□□ 0.37
USE1-205ENST00000594724 CNGA1P29973 690 aa17.39■□□□□ 0.37
USE1-205ENST00000594724 SNAP25P60880 206 aa17.39■□□□□ 0.37
USE1-205ENST00000594724 KCTD2Q14681 263 aa17.39■□□□□ 0.37
USE1-205ENST00000594724 CCDC96Q2M329 555 aa17.39■□□□□ 0.37
USE1-205ENST00000594724 PRPF38BQ5VTL8 546 aaKnown RBP17.39■□□□□ 0.37
USE1-205ENST00000594724 CENPQQ7L2Z9 268 aaPredicted RBP17.39■□□□□ 0.37
USE1-205ENST00000594724 FAM160B2Q86V87 743 aa17.39■□□□□ 0.37
USE1-205ENST00000594724 DIS3LQ8TF46 1054 aaKnown RBP17.39■□□□□ 0.37
USE1-205ENST00000594724 SLC5A4Q9NY91 659 aa17.39■□□□□ 0.37
USE1-205ENST00000594724 RAD50Q92878 1312 aa17.39■□□□□ 0.37
USE1-205ENST00000594724 COPB2P35606 906 aa17.38■□□□□ 0.37
USE1-205ENST00000594724 OLFML2BQ68BL8 750 aa17.38■□□□□ 0.37
USE1-205ENST00000594724 LHX8Q68G74 356 aa17.38■□□□□ 0.37
USE1-205ENST00000594724 TTBK2Q6IQ55 1244 aa17.38■□□□□ 0.37
USE1-205ENST00000594724 TRPV1Q8NER1 839 aa17.38■□□□□ 0.37
USE1-205ENST00000594724 DCAF4Q8WV16 495 aa17.38■□□□□ 0.37
USE1-205ENST00000594724 PAWRQ96IZ0 340 aaKnown RBP17.38■□□□□ 0.37
USE1-205ENST00000594724 MAML3Q96JK9 1138 aa17.38■□□□□ 0.37
USE1-205ENST00000594724 TTC14Q96N46 770 aa17.38■□□□□ 0.37
USE1-205ENST00000594724 OGDHLQ9ULD0 1010 aa17.38■□□□□ 0.37
USE1-205ENST00000594724 SGSM2O43147 1006 aa17.37■□□□□ 0.37
USE1-205ENST00000594724 PLA2G6O60733 806 aa17.37■□□□□ 0.37
USE1-205ENST00000594724 CAPN2P17655 700 aa17.37■□□□□ 0.37
USE1-205ENST00000594724 SLC16A2P36021 539 aa17.37■□□□□ 0.37
USE1-205ENST00000594724 ZNF792Q3KQV3 632 aa17.37■□□□□ 0.37
USE1-205ENST00000594724 PRAMEF19Q5SWL8 479 aa17.37■□□□□ 0.37
USE1-205ENST00000594724 DPF3Q92784 378 aa17.37■□□□□ 0.37
USE1-205ENST00000594724 AGBL1Q96MI9 1066 aa17.37■□□□□ 0.37
USE1-205ENST00000594724 GPCPD1Q9NPB8 672 aa17.37■□□□□ 0.37
USE1-205ENST00000594724 ZSWIM5Q9P217 1185 aa17.37■□□□□ 0.37
USE1-205ENST00000594724 PRR12Q9ULL5 1215 aa17.37■□□□□ 0.37
USE1-205ENST00000594724 FRMPD2Q68DX3 1309 aaPredicted RBP17.37■□□□□ 0.37
USE1-205ENST00000594724 ZNF236Q9UL36 1845 aa17.37■□□□□ 0.37
USE1-205ENST00000594724 FDX1P10109 184 aa17.36■□□□□ 0.37
USE1-205ENST00000594724 CYBAP13498 195 aa17.36■□□□□ 0.37
USE1-205ENST00000594724 MNX1P50219 401 aaPredicted RBP17.36■□□□□ 0.37
USE1-205ENST00000594724 CCDC174Q6PII3 467 aa17.36■□□□□ 0.37
USE1-205ENST00000594724 IQCA1Q86XH1 822 aa17.36■□□□□ 0.37
USE1-205ENST00000594724 DDX11Q96FC9 970 aa17.36■□□□□ 0.37
USE1-205ENST00000594724 HOMER2Q9NSB8 354 aa17.36■□□□□ 0.37
USE1-205ENST00000594724 ZNF536O15090 1300 aa17.36■□□□□ 0.37
USE1-205ENST00000594724 PDE4DIPQ5VU43 2346 aa17.35■□□□□ 0.37
USE1-205ENST00000594724 PDHBP11177 359 aa17.35■□□□□ 0.37
USE1-205ENST00000594724 OAZ1P54368 228 aa17.35■□□□□ 0.37
USE1-205ENST00000594724 NECAB2Q7Z6G3 386 aa17.35■□□□□ 0.37
USE1-205ENST00000594724 DGKHQ86XP1 1220 aa17.35■□□□□ 0.37
USE1-205ENST00000594724 ANKLE1Q8NAG6 615 aa17.35■□□□□ 0.37
USE1-205ENST00000594724 HTATIP2Q9BUP3 242 aa17.35■□□□□ 0.37
USE1-205ENST00000594724 KRT23Q9C075 422 aa17.35■□□□□ 0.37
USE1-205ENST00000594724 LAMA4Q16363 1823 aa17.35■□□□□ 0.37
USE1-205ENST00000594724 ZNFX1Q9P2E3 1918 aaKnown RBP17.35■□□□□ 0.37
USE1-205ENST00000594724 CYP21A2P08686 494 aa17.34■□□□□ 0.37
USE1-205ENST00000594724 ANO1Q5XXA6 986 aa17.34■□□□□ 0.37
USE1-205ENST00000594724 BTNL9Q6UXG8 535 aa17.34■□□□□ 0.37
USE1-205ENST00000594724 ANKRD35Q8N283 1001 aa17.34■□□□□ 0.37
USE1-205ENST00000594724 CHST13Q8NET6 341 aa17.34■□□□□ 0.37
USE1-205ENST00000594724 CCDC136Q96JN2 1154 aa17.34■□□□□ 0.37
USE1-205ENST00000594724 ZSCAN10Q96SZ4 725 aaPredicted RBP17.34■□□□□ 0.37
USE1-205ENST00000594724 CNNM2Q9H8M5 875 aa17.34■□□□□ 0.37
USE1-205ENST00000594724 DDX20Q9UHI6 824 aaKnown RBP17.34■□□□□ 0.37
USE1-205ENST00000594724 DIS3Q9Y2L1 958 aaKnown RBP17.34■□□□□ 0.37
USE1-205ENST00000594724 TAF6LQ9Y6J9 622 aa17.34■□□□□ 0.37
USE1-205ENST00000594724 DNAJC25-GNG10A0A024R161 153 aa17.33■□□□□ 0.36
USE1-205ENST00000594724 ALAS1P13196 640 aa17.33■□□□□ 0.36
USE1-205ENST00000594724 TAL1P17542 331 aaPredicted RBP17.33■□□□□ 0.36
USE1-205ENST00000594724 ZNF543Q08ER8 600 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms