RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 NPY5RQ15761 445 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 CCDC183Q5T5S1 534 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 MYSM1Q5VVJ2 828 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 WWC2Q6AWC2 1192 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 DLK2Q6UY11 383 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 SPICE1Q8N0Z3 855 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 OXER1Q8TDS5 423 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 GMCL1Q96IK5 515 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 WRNIP1Q96S55 665 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 NUP88Q99567 741 aaPredicted RBP15.2■□□□□ 0.02
VRK3-205ENST00000593919 FTOQ9C0B1 505 aaKnown RBP eCLIP15.2■□□□□ 0.02
VRK3-205ENST00000593919 SEC63Q9UGP8 760 aaKnown RBP15.2■□□□□ 0.02
VRK3-205ENST00000593919 ZNF112Q9UJU3 913 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 IQCA1LA6NCM1 817 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 POTECB2RU33 542 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 NR5A1Q13285 461 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 KIAA1755Q5JYT7 1200 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 TYW1BQ6NUM6 668 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 KRT26Q7Z3Y9 468 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 HEATR3Q7Z4Q2 680 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 ADGRF4Q8IZF3 695 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 USP28Q96RU2 1077 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 SCAND2PQ9GZW5 306 aaPredicted RBP15.2■□□□□ 0.02
VRK3-205ENST00000593919 FOXP1Q9H334 677 aaPredicted RBP15.2■□□□□ 0.02
VRK3-205ENST00000593919 TAF1DQ9H5J8 278 aaPredicted RBP15.2■□□□□ 0.02
VRK3-205ENST00000593919 GOPCQ9HD26 462 aa15.2■□□□□ 0.02
VRK3-205ENST00000593919 ZYXQ15942 572 aaKnown RBP15.19■□□□□ 0.02
VRK3-205ENST00000593919 SUPT20HL1Q3ZLR7 823 aa15.19■□□□□ 0.02
VRK3-205ENST00000593919 NOSTRINQ8IVI9 506 aa15.19■□□□□ 0.02
VRK3-205ENST00000593919 RNF214Q8ND24 703 aa15.19■□□□□ 0.02
VRK3-205ENST00000593919 PPP1R9BQ96SB3 815 aa15.19■□□□□ 0.02
VRK3-205ENST00000593919 JMJD4Q9H9V9 463 aa15.19■□□□□ 0.02
VRK3-205ENST00000593919 SH3GLB2Q9NR46 395 aa15.19■□□□□ 0.02
VRK3-205ENST00000593919 GINM1Q9NU53 330 aa15.19■□□□□ 0.02
VRK3-205ENST00000593919 BARHL2Q9NY43 387 aa15.19■□□□□ 0.02
VRK3-205ENST00000593919 CFAP45Q9UL16 551 aa15.19■□□□□ 0.02
VRK3-205ENST00000593919 PAPPA2Q9BXP8 1791 aa15.19■□□□□ 0.02
VRK3-205ENST00000593919 KRT2P35908 639 aa15.18■□□□□ 0.02
VRK3-205ENST00000593919 NLRP5P59047 1200 aa15.18■□□□□ 0.02
VRK3-205ENST00000593919 CEBPZQ03701 1054 aaKnown RBP15.18■□□□□ 0.02
VRK3-205ENST00000593919 EAPPQ56P03 285 aaPredicted RBP15.18■□□□□ 0.02
VRK3-205ENST00000593919 ATL3Q6DD88 541 aa15.18■□□□□ 0.02
VRK3-205ENST00000593919 ZC3H15Q8WU90 426 aaKnown RBP15.18■□□□□ 0.02
VRK3-205ENST00000593919 LEO1Q8WVC0 666 aaPredicted RBP15.18■□□□□ 0.02
VRK3-205ENST00000593919 BBXQ8WY36 941 aaPredicted RBP15.18■□□□□ 0.02
VRK3-205ENST00000593919 ZKSCAN4Q969J2 545 aaPredicted RBP15.18■□□□□ 0.02
VRK3-205ENST00000593919 KLRG1Q96E93 195 aa15.18■□□□□ 0.02
VRK3-205ENST00000593919 SPATA32Q96LK8 384 aa15.18■□□□□ 0.02
VRK3-205ENST00000593919 ZNF396Q96N95 335 aaPredicted RBP15.18■□□□□ 0.02
VRK3-205ENST00000593919 SH2D4AQ9H788 454 aa15.18■□□□□ 0.02
VRK3-205ENST00000593919 VCPKMTQ9H867 229 aa15.18■□□□□ 0.02
VRK3-205ENST00000593919 SMCHD1A6NHR9 2005 aa15.18■□□□□ 0.02
VRK3-205ENST00000593919 USP17L10C9JJH3 530 aa15.18■□□□□ 0.02
VRK3-205ENST00000593919 STXBP3O00186 592 aa15.18■□□□□ 0.02
VRK3-205ENST00000593919 BMP3P12645 472 aa15.18■□□□□ 0.02
VRK3-205ENST00000593919 SCYL3Q8IZE3 742 aa15.18■□□□□ 0.02
VRK3-205ENST00000593919 FEZ1Q99689 392 aa15.18■□□□□ 0.02
VRK3-205ENST00000593919 ELP1O95163 1332 aa15.18■□□□□ 0.02
VRK3-205ENST00000593919 TMEM232C9JQI7 657 aa15.17■□□□□ 0.02
VRK3-205ENST00000593919 PRKG1Q13976 671 aa15.17■□□□□ 0.02
VRK3-205ENST00000593919 CCDC148Q8NFR7 591 aa15.17■□□□□ 0.02
VRK3-205ENST00000593919 MTMR8Q96EF0 704 aa15.17■□□□□ 0.02
VRK3-205ENST00000593919 BRMS1Q9HCU9 246 aa15.17■□□□□ 0.02
VRK3-205ENST00000593919 NAPAP54920 295 aa15.16■□□□□ 0.02
VRK3-205ENST00000593919 PNMA6FA0A0J9YX94 578 aa15.16■□□□□ 0.02
VRK3-205ENST00000593919 ZBTB5O15062 677 aa15.16■□□□□ 0.02
VRK3-205ENST00000593919 ADAMTS3O15072 1205 aa15.16■□□□□ 0.02
VRK3-205ENST00000593919 CALML3P27482 149 aa15.16■□□□□ 0.02
VRK3-205ENST00000593919 IKQ13123 557 aaPredicted RBP15.16■□□□□ 0.02
VRK3-205ENST00000593919 FAM83BQ5T0W9 1011 aa15.16■□□□□ 0.02
VRK3-205ENST00000593919 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.16■□□□□ 0.02
VRK3-205ENST00000593919 TNFRSF25Q93038 417 aa15.16■□□□□ 0.02
VRK3-205ENST00000593919 PICK1Q9NRD5 415 aa15.16■□□□□ 0.02
VRK3-205ENST00000593919 POLR3EQ9NVU0 708 aa15.16■□□□□ 0.02
VRK3-205ENST00000593919 CLIC4Q9Y696 253 aa15.16■□□□□ 0.02
VRK3-205ENST00000593919 PTPRFP10586 1907 aa15.15■□□□□ 0.02
VRK3-205ENST00000593919 hCG_1984214I3L0E3 225 aa15.15■□□□□ 0.02
VRK3-205ENST00000593919 PPP1R11O60927 126 aaPredicted RBP15.15■□□□□ 0.02
VRK3-205ENST00000593919 USP2O75604 605 aaPredicted RBP15.15■□□□□ 0.02
VRK3-205ENST00000593919 PTPRAP18433 802 aa15.15■□□□□ 0.02
VRK3-205ENST00000593919 STAT2P52630 851 aa15.15■□□□□ 0.02
VRK3-205ENST00000593919 EARS2Q5JPH6 523 aaKnown RBP15.15■□□□□ 0.02
VRK3-205ENST00000593919 BTNL9Q6UXG8 535 aa15.15■□□□□ 0.02
VRK3-205ENST00000593919 PNMA8AQ86V59 439 aaPredicted RBP15.15■□□□□ 0.02
VRK3-205ENST00000593919 FAM177A1Q8N128 213 aaPredicted RBP15.15■□□□□ 0.02
VRK3-205ENST00000593919 ZNF713Q8N859 430 aaPredicted RBP15.15■□□□□ 0.02
VRK3-205ENST00000593919 CCDC12Q8WUD4 166 aaPredicted RBP15.15■□□□□ 0.02
VRK3-205ENST00000593919 KIAA1683Q9H0B3 1180 aa15.15■□□□□ 0.02
VRK3-205ENST00000593919 RTEL1Q9NZ71 1219 aa15.15■□□□□ 0.02
VRK3-205ENST00000593919 PCDHA4Q9UN74 947 aa15.15■□□□□ 0.02
VRK3-205ENST00000593919 FAM205CA6NFA0 338 aa15.15■□□□□ 0.02
VRK3-205ENST00000593919 LETM1O95202 739 aaPredicted RBP15.15■□□□□ 0.02
VRK3-205ENST00000593919 CDC37Q16543 378 aaPredicted RBP15.15■□□□□ 0.02
VRK3-205ENST00000593919 PARP14Q460N5 1801 aa15.15■□□□□ 0.02
VRK3-205ENST00000593919 NOM1Q5C9Z4 860 aaKnown RBP15.15■□□□□ 0.02
VRK3-205ENST00000593919 SYDE2Q5VT97 1194 aa15.15■□□□□ 0.02
VRK3-205ENST00000593919 BLIDQ8IZY5 108 aa15.15■□□□□ 0.02
VRK3-205ENST00000593919 COA7Q96BR5 231 aa15.15■□□□□ 0.02
VRK3-205ENST00000593919 ZMYND12Q9H0C1 365 aa15.15■□□□□ 0.02
VRK3-205ENST00000593919 RCOR1Q9UKL0 485 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms