RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 PQBP1O60828 265 aaKnown RBP20.91■□□□□ 0.94
RETREG3-212ENST00000593251 NDUFB10O96000 172 aa20.91■□□□□ 0.94
RETREG3-212ENST00000593251 CLTBP09497 229 aa20.91■□□□□ 0.94
RETREG3-212ENST00000593251 COPB2P35606 906 aa20.91■□□□□ 0.94
RETREG3-212ENST00000593251 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.91■□□□□ 0.94
RETREG3-212ENST00000593251 CPXCR1Q8N123 301 aa20.91■□□□□ 0.94
RETREG3-212ENST00000593251 KBTBD3Q8NAB2 608 aa20.91■□□□□ 0.94
RETREG3-212ENST00000593251 ROBO3Q96MS0 1386 aa20.91■□□□□ 0.94
RETREG3-212ENST00000593251 CDX2Q99626 313 aaPredicted RBP20.91■□□□□ 0.94
RETREG3-212ENST00000593251 TEX13BQ9BXU2 312 aa20.91■□□□□ 0.94
RETREG3-212ENST00000593251 EPB41L4AQ9HCS5 686 aaPredicted RBP20.91■□□□□ 0.94
RETREG3-212ENST00000593251 NYAP2Q9P242 653 aa20.91■□□□□ 0.94
RETREG3-212ENST00000593251 CLIP2Q9UDT6 1046 aa20.91■□□□□ 0.94
RETREG3-212ENST00000593251 ADAMTS4O75173 837 aa20.9■□□□□ 0.94
RETREG3-212ENST00000593251 PRDM1O75626 825 aa20.9■□□□□ 0.94
RETREG3-212ENST00000593251 EPHB4P54760 987 aa20.9■□□□□ 0.94
RETREG3-212ENST00000593251 DDX11Q96FC9 970 aa20.9■□□□□ 0.94
RETREG3-212ENST00000593251 SEMA6BQ9H3T3 888 aa20.9■□□□□ 0.94
RETREG3-212ENST00000593251 TACC3Q9Y6A5 838 aa20.9■□□□□ 0.94
RETREG3-212ENST00000593251 SYNRGQ9UMZ2 1314 aa20.89■□□□□ 0.93
RETREG3-212ENST00000593251 SNAI1O95863 264 aaPredicted RBP20.89■□□□□ 0.93
RETREG3-212ENST00000593251 PRPF38AQ8NAV1 312 aaKnown RBP20.89■□□□□ 0.93
RETREG3-212ENST00000593251 APPBP2Q92624 585 aa20.89■□□□□ 0.93
RETREG3-212ENST00000593251 COL25A1Q9BXS0 654 aaPredicted RBP20.89■□□□□ 0.93
RETREG3-212ENST00000593251 ZHX1Q9UKY1 873 aaPredicted RBP20.89■□□□□ 0.93
RETREG3-212ENST00000593251 PRUNE2Q8WUY3 3088 aa20.88■□□□□ 0.93
RETREG3-212ENST00000593251 IGKV6D-41A0A0C4DH26 115 aa20.88■□□□□ 0.93
RETREG3-212ENST00000593251 M0R2C6 588 aa20.88■□□□□ 0.93
RETREG3-212ENST00000593251 RNF113AO15541 343 aaKnown RBP20.88■□□□□ 0.93
RETREG3-212ENST00000593251 GPAA1O43292 621 aa20.88■□□□□ 0.93
RETREG3-212ENST00000593251 RAG1P15918 1043 aa20.88■□□□□ 0.93
RETREG3-212ENST00000593251 TDO2P48775 406 aa20.88■□□□□ 0.93
RETREG3-212ENST00000593251 ACLYP53396 1101 aa20.88■□□□□ 0.93
RETREG3-212ENST00000593251 IRX5P78411 483 aaPredicted RBP20.88■□□□□ 0.93
RETREG3-212ENST00000593251 GIMAP6Q6P9H5 292 aa20.88■□□□□ 0.93
RETREG3-212ENST00000593251 KIFC2Q96AC6 838 aa20.88■□□□□ 0.93
RETREG3-212ENST00000593251 TTYH1Q9H313 450 aaPredicted RBP20.88■□□□□ 0.93
RETREG3-212ENST00000593251 RAVER2Q9HCJ3 691 aaKnown RBP20.88■□□□□ 0.93
RETREG3-212ENST00000593251 CDH23Q9H251 3354 aa20.88■□□□□ 0.93
RETREG3-212ENST00000593251 SYNGAP1Q96PV0 1343 aa20.87■□□□□ 0.93
RETREG3-212ENST00000593251 DNAJC25-GNG10A0A024R161 153 aa20.87■□□□□ 0.93
RETREG3-212ENST00000593251 MYADML2A6NDP7 307 aa20.87■□□□□ 0.93
RETREG3-212ENST00000593251 ZBED4O75132 1171 aa20.87■□□□□ 0.93
RETREG3-212ENST00000593251 APPP05067 770 aa20.87■□□□□ 0.93
RETREG3-212ENST00000593251 SMAD3P84022 425 aaKnown RBP20.87■□□□□ 0.93
RETREG3-212ENST00000593251 LRRC47Q8N1G4 583 aaKnown RBP20.87■□□□□ 0.93
RETREG3-212ENST00000593251 MYLIPQ8WY64 445 aa20.87■□□□□ 0.93
RETREG3-212ENST00000593251 RNPC3Q96LT9 517 aaKnown RBP20.87■□□□□ 0.93
RETREG3-212ENST00000593251 STARD7Q9NQZ5 370 aa20.87■□□□□ 0.93
RETREG3-212ENST00000593251 TMEM39AQ9NV64 488 aa20.87■□□□□ 0.93
RETREG3-212ENST00000593251 FAM184BQ9ULE4 1060 aa20.87■□□□□ 0.93
RETREG3-212ENST00000593251 CTDP1Q9Y5B0 961 aaPredicted RBP20.87■□□□□ 0.93
RETREG3-212ENST00000593251 KIAA0355O15063 1070 aa20.86■□□□□ 0.93
RETREG3-212ENST00000593251 FAAP100Q0VG06 881 aa20.86■□□□□ 0.93
RETREG3-212ENST00000593251 KCNA10Q16322 511 aa20.86■□□□□ 0.93
RETREG3-212ENST00000593251 MAMDC4Q6UXC1 1216 aa20.86■□□□□ 0.93
RETREG3-212ENST00000593251 ZNF444Q8N0Y2 327 aaPredicted RBP20.86■□□□□ 0.93
RETREG3-212ENST00000593251 CEP95Q96GE4 821 aa20.86■□□□□ 0.93
RETREG3-212ENST00000593251 GPATCH3Q96I76 525 aa20.86■□□□□ 0.93
RETREG3-212ENST00000593251 TSEN34Q9BSV6 310 aaKnown RBP20.86■□□□□ 0.93
RETREG3-212ENST00000593251 ADCY6O43306 1168 aa20.85■□□□□ 0.93
RETREG3-212ENST00000593251 ANKRD35Q8N283 1001 aa20.85■□□□□ 0.93
RETREG3-212ENST00000593251 MSL3Q8N5Y2 521 aaKnown RBP20.85■□□□□ 0.93
RETREG3-212ENST00000593251 KLHDC9Q8NEP7 349 aa20.85■□□□□ 0.93
RETREG3-212ENST00000593251 MAFAQ8NHW3 353 aaPredicted RBP20.85■□□□□ 0.93
RETREG3-212ENST00000593251 CHMP4CQ96CF2 233 aa20.85■□□□□ 0.93
RETREG3-212ENST00000593251 FGD4Q96M96 766 aa20.85■□□□□ 0.93
RETREG3-212ENST00000593251 DCTPP1Q9H773 170 aa20.85■□□□□ 0.93
RETREG3-212ENST00000593251 SLC38A10Q9HBR0 1119 aa20.85■□□□□ 0.93
RETREG3-212ENST00000593251 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.85■□□□□ 0.93
RETREG3-212ENST00000593251 ATP2A1O14983 1001 aa20.84■□□□□ 0.93
RETREG3-212ENST00000593251 FPGSQ05932 587 aa20.84■□□□□ 0.93
RETREG3-212ENST00000593251 ACVR2BQ13705 512 aa20.84■□□□□ 0.93
RETREG3-212ENST00000593251 CCSAPQ6IQ19 270 aaPredicted RBP20.84■□□□□ 0.93
RETREG3-212ENST00000593251 IFNL3Q8IZI9 196 aa20.84■□□□□ 0.93
RETREG3-212ENST00000593251 NUP133Q8WUM0 1156 aa20.84■□□□□ 0.93
RETREG3-212ENST00000593251 MKL1Q969V6 931 aa20.84■□□□□ 0.93
RETREG3-212ENST00000593251 SEC62Q99442 399 aaKnown RBP20.84■□□□□ 0.93
RETREG3-212ENST00000593251 MTMR4Q9NYA4 1195 aa20.84■□□□□ 0.93
RETREG3-212ENST00000593251 FEM1BQ9UK73 627 aa20.84■□□□□ 0.93
RETREG3-212ENST00000593251 MOXD2PA6NHM9 499 aa20.83■□□□□ 0.93
RETREG3-212ENST00000593251 DCDC2CA8MYV0 355 aa20.83■□□□□ 0.93
RETREG3-212ENST00000593251 DUSP11O75319 330 aaKnown RBP20.83■□□□□ 0.93
RETREG3-212ENST00000593251 ZFYP08048 801 aaPredicted RBP20.83■□□□□ 0.93
RETREG3-212ENST00000593251 C6orf222P0C671 652 aaPredicted RBP20.83■□□□□ 0.93
RETREG3-212ENST00000593251 GNAT2P19087 354 aa20.83■□□□□ 0.93
RETREG3-212ENST00000593251 ANKRD33Q7Z3H0 272 aa20.83■□□□□ 0.93
RETREG3-212ENST00000593251 ZNF467Q7Z7K2 595 aaPredicted RBP20.83■□□□□ 0.93
RETREG3-212ENST00000593251 HOMER2Q9NSB8 354 aa20.83■□□□□ 0.93
RETREG3-212ENST00000593251 ISY1Q9ULR0 285 aaKnown RBP20.83■□□□□ 0.93
RETREG3-212ENST00000593251 PATL2C9JE40 543 aaKnown RBP20.82■□□□□ 0.92
RETREG3-212ENST00000593251 TTLL1O95922 423 aa20.82■□□□□ 0.92
RETREG3-212ENST00000593251 CCDC144BQ3MJ40 725 aa20.82■□□□□ 0.92
RETREG3-212ENST00000593251 SLFN13Q68D06 897 aa20.82■□□□□ 0.92
RETREG3-212ENST00000593251 ARMCX2Q7L311 632 aa20.82■□□□□ 0.92
RETREG3-212ENST00000593251 TOX2Q96NM4 488 aa20.82■□□□□ 0.92
RETREG3-212ENST00000593251 ZNF287Q9HBT7 754 aa20.82■□□□□ 0.92
RETREG3-212ENST00000593251 LRRC37A2A6NM11 1700 aa20.81■□□□□ 0.92
RETREG3-212ENST00000593251 ASGR1P07306 291 aa20.81■□□□□ 0.92
RETREG3-212ENST00000593251 TSPY3P0CV98 308 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms