RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 HINFPQ9BQA5 517 aa6.47□□□□□ -1.37
ERCC1-216ENST00000592444 ASCC2Q9H1I8 757 aaPredicted RBP6.47□□□□□ -1.37
ERCC1-216ENST00000592444 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.47□□□□□ -1.37
ERCC1-216ENST00000592444 PTPRFP10586 1907 aa6.46□□□□□ -1.37
ERCC1-216ENST00000592444 TERTO14746 1132 aaKnown RBP6.46□□□□□ -1.38
ERCC1-216ENST00000592444 LMNAP02545 664 aaKnown RBP6.46□□□□□ -1.38
ERCC1-216ENST00000592444 CYP2C18P33260 490 aa6.46□□□□□ -1.38
ERCC1-216ENST00000592444 NEUROD1Q13562 356 aa6.46□□□□□ -1.38
ERCC1-216ENST00000592444 TAF7Q15545 349 aaPredicted RBP6.46□□□□□ -1.38
ERCC1-216ENST00000592444 Q3C1V9 767 aa6.46□□□□□ -1.38
ERCC1-216ENST00000592444 PLEKHH3Q7Z736 793 aa6.46□□□□□ -1.38
ERCC1-216ENST00000592444 CCAR1Q8IX12 1150 aaKnown RBP6.46□□□□□ -1.38
ERCC1-216ENST00000592444 GPRC5AQ8NFJ5 357 aa6.46□□□□□ -1.38
ERCC1-216ENST00000592444 RTF1Q92541 710 aaKnown RBP6.46□□□□□ -1.38
ERCC1-216ENST00000592444 PORCNQ9H237 461 aa6.46□□□□□ -1.38
ERCC1-216ENST00000592444 TXNRD2Q9NNW7 524 aa6.46□□□□□ -1.38
ERCC1-216ENST00000592444 PICK1Q9NRD5 415 aa6.46□□□□□ -1.38
ERCC1-216ENST00000592444 SEPT4O43236 478 aa6.45□□□□□ -1.38
ERCC1-216ENST00000592444 EIF2S2P20042 333 aaKnown RBP6.45□□□□□ -1.38
ERCC1-216ENST00000592444 EIF4A1P60842 406 aaKnown RBP6.45□□□□□ -1.38
ERCC1-216ENST00000592444 SMAD2Q15796 467 aaKnown RBP6.45□□□□□ -1.38
ERCC1-216ENST00000592444 FAM47AQ5JRC9 791 aa6.45□□□□□ -1.38
ERCC1-216ENST00000592444 CCDC84Q86UT8 332 aaPredicted RBP6.45□□□□□ -1.38
ERCC1-216ENST00000592444 SCYL3Q8IZE3 742 aa6.45□□□□□ -1.38
ERCC1-216ENST00000592444 DCLK2Q8N568 766 aa6.45□□□□□ -1.38
ERCC1-216ENST00000592444 TMEM105Q8N8V8 129 aa6.45□□□□□ -1.38
ERCC1-216ENST00000592444 PHACTR3Q96KR7 559 aa6.45□□□□□ -1.38
ERCC1-216ENST00000592444 ISCA1Q9BUE6 129 aa6.45□□□□□ -1.38
ERCC1-216ENST00000592444 ATP13A2Q9NQ11 1180 aa6.45□□□□□ -1.38
ERCC1-216ENST00000592444 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.45□□□□□ -1.38
ERCC1-216ENST00000592444 NDUFB9Q9Y6M9 179 aa6.45□□□□□ -1.38
ERCC1-216ENST00000592444 TEP1Q99973 2627 aaKnown RBP6.45□□□□□ -1.38
ERCC1-216ENST00000592444 SNAP23O00161 211 aa6.44□□□□□ -1.38
ERCC1-216ENST00000592444 STXBP3O00186 592 aa6.44□□□□□ -1.38
ERCC1-216ENST00000592444 DIAPH1O60610 1272 aaKnown RBP6.44□□□□□ -1.38
ERCC1-216ENST00000592444 IL1R1P14778 569 aa6.44□□□□□ -1.38
ERCC1-216ENST00000592444 SDHBP21912 280 aa6.44□□□□□ -1.38
ERCC1-216ENST00000592444 KCNJ4P48050 445 aa6.44□□□□□ -1.38
ERCC1-216ENST00000592444 MMP16P51512 607 aa6.44□□□□□ -1.38
ERCC1-216ENST00000592444 PABPC4Q13310 644 aaKnown RBP eCLIP6.44□□□□□ -1.384e-6■■□□□ 11.7
ERCC1-216ENST00000592444 PROCA1Q8NCQ7 364 aaPredicted RBP6.44□□□□□ -1.38
ERCC1-216ENST00000592444 SNIP1Q8TAD8 396 aaKnown RBP6.44□□□□□ -1.38
ERCC1-216ENST00000592444 NPLOC4Q8TAT6 608 aa6.44□□□□□ -1.38
ERCC1-216ENST00000592444 KIFC2Q96AC6 838 aa6.44□□□□□ -1.38
ERCC1-216ENST00000592444 CDC5LQ99459 802 aaKnown RBP6.44□□□□□ -1.38
ERCC1-216ENST00000592444 CWC22Q9HCG8 908 aaKnown RBP6.44□□□□□ -1.38
ERCC1-216ENST00000592444 STARD7Q9NQZ5 370 aa6.44□□□□□ -1.38
ERCC1-216ENST00000592444 TMOD2Q9NZR1 351 aa6.44□□□□□ -1.38
ERCC1-216ENST00000592444 DBF4Q9UBU7 674 aaPredicted RBP6.44□□□□□ -1.38
ERCC1-216ENST00000592444 ZMIZ1Q9ULJ6 1067 aa6.44□□□□□ -1.38
ERCC1-216ENST00000592444 PCDHGC5Q9Y5F6 944 aa6.44□□□□□ -1.38
ERCC1-216ENST00000592444 LOC400499M0QZD8 3231 aa6.44□□□□□ -1.38
ERCC1-216ENST00000592444 DSPP15924 2871 aaKnown RBP6.43□□□□□ -1.38
ERCC1-216ENST00000592444 PHF20L1A8MW92 1017 aa6.43□□□□□ -1.38
ERCC1-216ENST00000592444 KRT38O76015 456 aa6.43□□□□□ -1.38
ERCC1-216ENST00000592444 PROS1P07225 676 aa6.43□□□□□ -1.38
ERCC1-216ENST00000592444 CLUL1Q15846 466 aa6.43□□□□□ -1.38
ERCC1-216ENST00000592444 MFSD14BQ5SR56 506 aa6.43□□□□□ -1.38
ERCC1-216ENST00000592444 FKBP1CQ5VVH2 108 aa6.43□□□□□ -1.38
ERCC1-216ENST00000592444 RIPOR3Q96MK2 946 aa6.43□□□□□ -1.38
ERCC1-216ENST00000592444 USB1Q9BQ65 265 aaKnown RBP6.43□□□□□ -1.38
ERCC1-216ENST00000592444 SUGCTQ9HAC7 445 aa6.43□□□□□ -1.38
ERCC1-216ENST00000592444 MTUS1Q9ULD2 1270 aa6.43□□□□□ -1.38
ERCC1-216ENST00000592444 UMODL1Q5DID0 1318 aa6.43□□□□□ -1.38
ERCC1-216ENST00000592444 PHIPQ8WWQ0 1821 aa6.43□□□□□ -1.38
ERCC1-216ENST00000592444 SPEF2Q9C093 1822 aa6.43□□□□□ -1.38
ERCC1-216ENST00000592444 TAF4O00268 1085 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 TULP1O00294 542 aaPredicted RBP6.42□□□□□ -1.38
ERCC1-216ENST00000592444 WNT7AO00755 349 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 PDE8AO60658 829 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 PGK1P00558 417 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 SNRPBP14678 240 aaKnown RBP6.42□□□□□ -1.38
ERCC1-216ENST00000592444 CCL23P55773 120 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 USP46P62068 366 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 ERVK-9P63128 1117 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 ERVK-24P63145 666 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 RING1Q06587 406 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 TTLL4Q14679 1199 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 PRAMEF19Q5SWL8 479 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 RNF180Q86T96 592 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 CYP2W1Q8TAV3 490 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 FAM151AQ8WW52 585 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 RUBCNQ92622 972 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 JARID2Q92833 1246 aaPredicted RBP6.42□□□□□ -1.38
ERCC1-216ENST00000592444 PABPC5Q96DU9 382 aaKnown RBP6.42□□□□□ -1.38
ERCC1-216ENST00000592444 XPNPEP3Q9NQH7 507 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 RBPJLQ9UBG7 517 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 ANGPTL2Q9UKU9 493 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 CEP295Q9C0D2 2601 aa6.42□□□□□ -1.38
ERCC1-216ENST00000592444 OTOGLQ3ZCN5 2332 aa6.41□□□□□ -1.38
ERCC1-216ENST00000592444 KIF28PB7ZC32 967 aa6.41□□□□□ -1.38
ERCC1-216ENST00000592444 U2SURPO15042 1029 aaKnown RBP6.41□□□□□ -1.38
ERCC1-216ENST00000592444 MBTPS2O43462 519 aa6.41□□□□□ -1.38
ERCC1-216ENST00000592444 DXOO77932 396 aaKnown RBP6.41□□□□□ -1.38
ERCC1-216ENST00000592444 IGHA2P01877 340 aa6.41□□□□□ -1.38
ERCC1-216ENST00000592444 HSP90B1P14625 803 aaKnown RBP6.41□□□□□ -1.38
ERCC1-216ENST00000592444 SMPD1P17405 629 aa6.41□□□□□ -1.38
ERCC1-216ENST00000592444 HMGCS2P54868 508 aa6.41□□□□□ -1.38
ERCC1-216ENST00000592444 HERVK_113P62684 666 aa6.41□□□□□ -1.38
ERCC1-216ENST00000592444 IRX3P78415 501 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms