RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 TRPV6Q9H1D0 765 aa11.16□□□□□ -0.62
SMARCA4-218ENST00000592158 CD207Q9UJ71 328 aa11.16□□□□□ -0.62
SMARCA4-218ENST00000592158 R4GN57 208 aa11.16□□□□□ -0.62
SMARCA4-218ENST00000592158 SMG1Q96Q15 3661 aaKnown RBP11.16□□□□□ -0.62
SMARCA4-218ENST00000592158 H7C1W4 665 aa11.15□□□□□ -0.62
SMARCA4-218ENST00000592158 B4GALT4O60513 344 aa11.15□□□□□ -0.62
SMARCA4-218ENST00000592158 IFIT5Q13325 482 aaKnown RBP11.15□□□□□ -0.62
SMARCA4-218ENST00000592158 PPM1JQ5JR12 505 aa11.15□□□□□ -0.62
SMARCA4-218ENST00000592158 SHCBP1Q8NEM2 672 aa11.15□□□□□ -0.62
SMARCA4-218ENST00000592158 C17orf80Q9BSJ5 609 aa11.15□□□□□ -0.62
SMARCA4-218ENST00000592158 LHX6Q9UPM6 363 aa11.15□□□□□ -0.62
SMARCA4-218ENST00000592158 DSPP15924 2871 aaKnown RBP11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 USP17L15C9J2P7 530 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 USP17L13C9JLJ4 530 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 USP17L11C9JVI0 530 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 USP17L18D6R9N7 530 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 USP17L22D6RA61 530 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 USP17L17D6RBQ6 530 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 USP17L19D6RCP7 530 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 USP17L20D6RJB6 530 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 KCNJ6P48051 423 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 USP17L24Q0WX57 530 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 PICALMQ13492 652 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 LDHAL6AQ6ZMR3 332 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 SLC43A3Q8NBI5 491 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 CDCA7LQ96GN5 454 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 CRBNQ96SW2 442 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 RAD9AQ99638 391 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 MOV10L1Q9BXT6 1211 aaKnown RBP11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 FTOQ9C0B1 505 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 DDX4Q9NQI0 724 aaKnown RBP11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 CNNM1Q9NRU3 951 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 EMILIN3Q9NT22 766 aa11.14□□□□□ -0.63
SMARCA4-218ENST00000592158 KIF16BQ96L93 1317 aa11.13□□□□□ -0.63
SMARCA4-218ENST00000592158 TAF4O00268 1085 aa11.13□□□□□ -0.63
SMARCA4-218ENST00000592158 TBX10O75333 385 aa11.13□□□□□ -0.63
SMARCA4-218ENST00000592158 HOXB7P09629 217 aa11.13□□□□□ -0.63
SMARCA4-218ENST00000592158 RING1Q06587 406 aa11.13□□□□□ -0.63
SMARCA4-218ENST00000592158 CWF19L2Q2TBE0 894 aaKnown RBP11.13□□□□□ -0.63
SMARCA4-218ENST00000592158 GNASQ5JWF2 1037 aa11.13□□□□□ -0.63
SMARCA4-218ENST00000592158 ZBTB33Q86T24 672 aa11.13□□□□□ -0.63
SMARCA4-218ENST00000592158 RPGRIP1Q96KN7 1286 aa11.13□□□□□ -0.63
SMARCA4-218ENST00000592158 TINF2Q9BSI4 451 aa11.13□□□□□ -0.63
SMARCA4-218ENST00000592158 MAP3K2Q9Y2U5 619 aa11.13□□□□□ -0.63
SMARCA4-218ENST00000592158 LOC400499M0QZD8 3231 aa11.13□□□□□ -0.63
SMARCA4-218ENST00000592158 COL4A3Q01955 1670 aa11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 PRR5-ARHGAP8B1AHC4 643 aa11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 DUSP11O75319 330 aaKnown RBP11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 BAIAP3O94812 1187 aa11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 ERCC3P19447 782 aa11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 ZEB1P37275 1124 aaPredicted RBP11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 CLCN5P51795 746 aa11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 ARHGAP8P85298 464 aa11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 GCKRQ14397 625 aa11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 CAVIN4Q5BKX8 364 aa11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 USP17L2Q6R6M4 530 aa11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 LBX2Q6XYB7 198 aa11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 ZNF594Q96JF6 807 aaPredicted RBP11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 HNRNPABQ99729 332 aaKnown RBP11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 SPC25Q9HBM1 224 aa11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 FAM184BQ9ULE4 1060 aa11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 CHMP3Q9Y3E7 222 aa11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 MYO10Q9HD67 2058 aa11.12□□□□□ -0.63
SMARCA4-218ENST00000592158 EYA4O95677 639 aa11.11□□□□□ -0.63
SMARCA4-218ENST00000592158 DDX58O95786 925 aaKnown RBP11.11□□□□□ -0.63
SMARCA4-218ENST00000592158 HYAL1Q12794 435 aa11.11□□□□□ -0.63
SMARCA4-218ENST00000592158 ITGA7Q13683 1181 aa11.11□□□□□ -0.63
SMARCA4-218ENST00000592158 CATSPERGQ6ZRH7 1159 aa11.11□□□□□ -0.63
SMARCA4-218ENST00000592158 ABRAQ8N0Z2 381 aa11.11□□□□□ -0.63
SMARCA4-218ENST00000592158 CNPY2Q9Y2B0 182 aa11.11□□□□□ -0.63
SMARCA4-218ENST00000592158 ATG2AQ2TAZ0 1938 aa11.11□□□□□ -0.63
SMARCA4-218ENST00000592158 IGF2RP11717 2491 aa11.11□□□□□ -0.63
SMARCA4-218ENST00000592158 MAPK8IP3Q9UPT6 1336 aa11.1□□□□□ -0.63
SMARCA4-218ENST00000592158 MYH2Q9UKX2 1941 aa11.1□□□□□ -0.63
SMARCA4-218ENST00000592158 MYH13Q9UKX3 1938 aa11.1□□□□□ -0.63
SMARCA4-218ENST00000592158 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
SMARCA4-218ENST00000592158 NEURL1BA8MQ27 555 aa11.1□□□□□ -0.63
SMARCA4-218ENST00000592158 GJB5O95377 273 aa11.1□□□□□ -0.63
SMARCA4-218ENST00000592158 ASNSP08243 561 aa11.1□□□□□ -0.63
SMARCA4-218ENST00000592158 RFC2P35250 354 aa11.1□□□□□ -0.63
SMARCA4-218ENST00000592158 WDR5P61964 334 aaKnown RBP11.1□□□□□ -0.63
SMARCA4-218ENST00000592158 DEFB103AP81534 67 aa11.1□□□□□ -0.63
SMARCA4-218ENST00000592158 GPM6BQ13491 265 aa11.1□□□□□ -0.63
SMARCA4-218ENST00000592158 TAF7LQ5H9L4 462 aa11.1□□□□□ -0.63
SMARCA4-218ENST00000592158 CCDC105Q8IYK2 499 aa11.1□□□□□ -0.63
SMARCA4-218ENST00000592158 PHF7Q9BWX1 381 aaPredicted RBP11.1□□□□□ -0.63
SMARCA4-218ENST00000592158 MFSD1Q9H3U5 465 aa11.1□□□□□ -0.63
SMARCA4-218ENST00000592158 GRIN2DO15399 1336 aa11.09□□□□□ -0.63
SMARCA4-218ENST00000592158 FANCMQ8IYD8 2048 aa11.09□□□□□ -0.63
SMARCA4-218ENST00000592158 CNOT1A5YKK6 2376 aaKnown RBP11.09□□□□□ -0.63
SMARCA4-218ENST00000592158 CYP2C9P11712 490 aa11.09□□□□□ -0.63
SMARCA4-218ENST00000592158 PRDX5P30044 214 aa11.09□□□□□ -0.63
SMARCA4-218ENST00000592158 CASP7P55210 303 aa11.09□□□□□ -0.63
SMARCA4-218ENST00000592158 RRP1P56182 461 aaKnown RBP11.09□□□□□ -0.63
SMARCA4-218ENST00000592158 GJA9P57773 515 aa11.09□□□□□ -0.63
SMARCA4-218ENST00000592158 JAG1P78504 1218 aa11.09□□□□□ -0.63
SMARCA4-218ENST00000592158 LMNB2Q03252 620 aa11.09□□□□□ -0.63
SMARCA4-218ENST00000592158 NEXNQ0ZGT2 675 aa11.09□□□□□ -0.63
SMARCA4-218ENST00000592158 EPC2Q52LR7 807 aa11.09□□□□□ -0.63
SMARCA4-218ENST00000592158 CXCL17Q6UXB2 119 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms