RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 ANKRD33BA6NCL7 494 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 ESPNB1AK53 854 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 LGR5O75473 907 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 ITGBL1O95965 494 aaPredicted RBP7.62□□□□□ -1.19
VPS4B-205ENST00000591383 HUNKP57058 714 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 VPS53Q5VIR6 699 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 MIGA2Q7L4E1 593 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 ARMC9Q7Z3E5 817 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 NPAS4Q8IUM7 802 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 STK11IPQ8N1F8 1099 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 C2orf69Q8N8R5 385 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 ZNF511Q8NB15 262 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 SLC10A4Q96EP9 437 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 TEPSINQ96N21 525 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 WRNIP1Q96S55 665 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 STRBPQ96SI9 672 aaKnown RBP7.62□□□□□ -1.19
VPS4B-205ENST00000591383 MTRQ99707 1265 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 ZNF341Q9BYN7 854 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 IL25Q9H293 177 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 DCP1AQ9NPI6 582 aaPredicted RBP7.62□□□□□ -1.19
VPS4B-205ENST00000591383 ANO2Q9NQ90 1003 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 ATP8A2Q9NTI2 1148 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 ARPP21Q9UBL0 812 aaPredicted RBP7.62□□□□□ -1.19
VPS4B-205ENST00000591383 PCDHB11Q9Y5F2 797 aa7.62□□□□□ -1.19
VPS4B-205ENST00000591383 THSD7BQ9C0I4 1608 aa7.61□□□□□ -1.19
VPS4B-205ENST00000591383 GSG1L2A8MUP6 293 aa7.61□□□□□ -1.19
VPS4B-205ENST00000591383 MINDY4BA8MYZ0 360 aa7.61□□□□□ -1.19
VPS4B-205ENST00000591383 UBE2Q2LH0YL09 131 aa7.61□□□□□ -1.19
VPS4B-205ENST00000591383 PPP1R12BO60237 982 aaPredicted RBP7.61□□□□□ -1.19
VPS4B-205ENST00000591383 ICMTO60725 284 aa7.61□□□□□ -1.19
VPS4B-205ENST00000591383 SLURP2P0DP57 97 aa7.61□□□□□ -1.19
VPS4B-205ENST00000591383 IREB2P48200 963 aaKnown RBP7.61□□□□□ -1.19
VPS4B-205ENST00000591383 HTRA3P83110 453 aa7.61□□□□□ -1.19
VPS4B-205ENST00000591383 ZNF211Q13398 564 aaPredicted RBP7.61□□□□□ -1.19
VPS4B-205ENST00000591383 NYAP1Q6ZVC0 841 aa7.61□□□□□ -1.19
VPS4B-205ENST00000591383 SLC44A5Q8NCS7 719 aa7.61□□□□□ -1.19
VPS4B-205ENST00000591383 HINFPQ9BQA5 517 aa7.61□□□□□ -1.19
VPS4B-205ENST00000591383 ESYT1Q9BSJ8 1104 aa7.61□□□□□ -1.19
VPS4B-205ENST00000591383 C1QTNF2Q9BXJ5 285 aa7.61□□□□□ -1.19
VPS4B-205ENST00000591383 DHX36Q9H2U1 1008 aaKnown RBP7.61□□□□□ -1.19
VPS4B-205ENST00000591383 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.61□□□□□ -1.19
VPS4B-205ENST00000591383 CSADQ9Y600 493 aa7.61□□□□□ -1.19
VPS4B-205ENST00000591383 ROBO3Q96MS0 1386 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 H3BRB1 525 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 FOXP2O15409 715 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 SGSM2O43147 1006 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 GDF11O95390 407 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 HSPA6P17066 643 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 HAND2P61296 217 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 VGLL4Q14135 290 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 NBPF20Q3BBV1 942 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 CST9Q5W186 159 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 KIAA1211Q6ZU35 1233 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 TTC6Q86TZ1 520 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 TICAM2Q86XR7 235 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 IFNL3Q8IZI9 196 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 GIPC2Q8TF65 315 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 ZNF516Q92618 1163 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 DYNLL2Q96FJ2 89 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 CLMNQ96JQ2 1002 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 TUT1Q9H6E5 874 aaKnown RBP7.6□□□□□ -1.19
VPS4B-205ENST00000591383 DNAJC18Q9H819 358 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 ELP3Q9H9T3 547 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 TOMM22Q9NS69 142 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 PCDH10Q9P2E7 1040 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 HERC5Q9UII4 1024 aaKnown RBP7.6□□□□□ -1.19
VPS4B-205ENST00000591383 SERPINB13Q9UIV8 391 aa7.6□□□□□ -1.19
VPS4B-205ENST00000591383 PHIPQ8WWQ0 1821 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 ZMYM6O95789 1325 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 PTPRFP10586 1907 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 SMIM22K7EJ46 135 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 MPHOSPH10O00566 681 aaKnown RBP7.59□□□□□ -1.19
VPS4B-205ENST00000591383 HSPD1P10809 573 aaKnown RBP7.59□□□□□ -1.19
VPS4B-205ENST00000591383 WEE1P30291 646 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 INPP5BP32019 993 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 PLCD1P51178 756 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 FKBP1BP68106 108 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 PPARAQ07869 468 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 ECM1Q16610 540 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 TJAP1Q5JTD0 557 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 GIMAP6Q6P9H5 292 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 CTR9Q6PD62 1173 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 GLYCTKQ8IVS8 523 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.59□□□□□ -1.19
VPS4B-205ENST00000591383 GTF3C2Q8WUA4 911 aaPredicted RBP7.59□□□□□ -1.19
VPS4B-205ENST00000591383 EHD4Q9H223 541 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 PICK1Q9NRD5 415 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.59□□□□□ -1.19
VPS4B-205ENST00000591383 PI4KBQ9UBF8 816 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 SEPT3Q9UH03 358 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 TLL2Q9Y6L7 1015 aa7.59□□□□□ -1.19
VPS4B-205ENST00000591383 LOC285556D6RIA3 1793 aa7.59□□□□□ -1.2
VPS4B-205ENST00000591383 GREB1LQ9C091 1923 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-205ENST00000591383 MYH4Q9Y623 1939 aa7.58□□□□□ -1.2
VPS4B-205ENST00000591383 M0R2N6 131 aa7.58□□□□□ -1.2
VPS4B-205ENST00000591383 USP2O75604 605 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-205ENST00000591383 PRDM1O75626 825 aa7.58□□□□□ -1.2
VPS4B-205ENST00000591383 SLC3A2P08195 630 aaKnown RBP7.58□□□□□ -1.2
VPS4B-205ENST00000591383 SHMT1P34896 483 aa7.58□□□□□ -1.2
VPS4B-205ENST00000591383 ZNF157P51786 506 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms