RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 ZNF576Q9H609 170 aa19.14■□□□□ 0.65
DDX39A-216ENST00000591275 ZHX1Q9UKY1 873 aaPredicted RBP19.14■□□□□ 0.65
DDX39A-216ENST00000591275 MYADML2A6NDP7 307 aa19.13■□□□□ 0.65
DDX39A-216ENST00000591275 SNAI1O95863 264 aaPredicted RBP19.13■□□□□ 0.65
DDX39A-216ENST00000591275 TIMP1P01033 207 aa19.13■□□□□ 0.65
DDX39A-216ENST00000591275 COPB2P35606 906 aa19.13■□□□□ 0.65
DDX39A-216ENST00000591275 IRX5P78411 483 aaPredicted RBP19.13■□□□□ 0.65
DDX39A-216ENST00000591275 SNRNP48Q6IEG0 339 aaKnown RBP19.13■□□□□ 0.65
DDX39A-216ENST00000591275 CTR9Q6PD62 1173 aa19.13■□□□□ 0.65
DDX39A-216ENST00000591275 TIFAQ96CG3 184 aa19.13■□□□□ 0.65
DDX39A-216ENST00000591275 DDRGK1Q96HY6 314 aa19.13■□□□□ 0.65
DDX39A-216ENST00000591275 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.13■□□□□ 0.654e-20■□□□□ 10.4
DDX39A-216ENST00000591275 FAM184BQ9ULE4 1060 aa19.13■□□□□ 0.65
DDX39A-216ENST00000591275 RIPK3Q9Y572 518 aa19.13■□□□□ 0.65
DDX39A-216ENST00000591275 SLC4A4Q9Y6R1 1079 aa19.13■□□□□ 0.65
DDX39A-216ENST00000591275 KLHDC9Q8NEP7 349 aa19.12■□□□□ 0.65
DDX39A-216ENST00000591275 PPM1EQ8WY54 764 aa19.12■□□□□ 0.65
DDX39A-216ENST00000591275 DDX11Q96FC9 970 aa19.12■□□□□ 0.65
DDX39A-216ENST00000591275 SLF1Q9BQI6 1058 aa19.12■□□□□ 0.65
DDX39A-216ENST00000591275 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.12■□□□□ 0.65
DDX39A-216ENST00000591275 NCOR1O75376 2440 aa19.12■□□□□ 0.65
DDX39A-216ENST00000591275 SYNGAP1Q96PV0 1343 aa19.11■□□□□ 0.65
DDX39A-216ENST00000591275 MOXD2PA6NHM9 499 aa19.11■□□□□ 0.65
DDX39A-216ENST00000591275 GRXCR1A8MXD5 290 aa19.11■□□□□ 0.65
DDX39A-216ENST00000591275 TJAP1Q5JTD0 557 aa19.11■□□□□ 0.65
DDX39A-216ENST00000591275 CCSAPQ6IQ19 270 aaPredicted RBP19.11■□□□□ 0.65
DDX39A-216ENST00000591275 STK11IPQ8N1F8 1099 aa19.11■□□□□ 0.65
DDX39A-216ENST00000591275 VTI1AQ96AJ9 217 aa19.11■□□□□ 0.65
DDX39A-216ENST00000591275 TEX13BQ9BXU2 312 aa19.11■□□□□ 0.65
DDX39A-216ENST00000591275 TBX21Q9UL17 535 aa19.11■□□□□ 0.65
DDX39A-216ENST00000591275 MCM3APO60318 1980 aa19.11■□□□□ 0.65
DDX39A-216ENST00000591275 MYH7P12883 1935 aa19.11■□□□□ 0.65
DDX39A-216ENST00000591275 BDP1A6H8Y1 2624 aa19.1■□□□□ 0.65
DDX39A-216ENST00000591275 ADCY6O43306 1168 aa19.1■□□□□ 0.65
DDX39A-216ENST00000591275 C6orf222P0C671 652 aaPredicted RBP19.1■□□□□ 0.65
DDX39A-216ENST00000591275 ATP5JP18859 108 aa19.1■□□□□ 0.65
DDX39A-216ENST00000591275 PBX2P40425 430 aa19.1■□□□□ 0.65
DDX39A-216ENST00000591275 MFSD5Q6N075 450 aa19.1■□□□□ 0.65
DDX39A-216ENST00000591275 CCDC129Q6ZRS4 1044 aa19.1■□□□□ 0.65
DDX39A-216ENST00000591275 C16orf59Q7L2K0 433 aa19.1■□□□□ 0.65
DDX39A-216ENST00000591275 SIRT2Q8IXJ6 389 aa19.1■□□□□ 0.65
DDX39A-216ENST00000591275 CPXCR1Q8N123 301 aa19.1■□□□□ 0.65
DDX39A-216ENST00000591275 MSL3Q8N5Y2 521 aaKnown RBP19.1■□□□□ 0.65
DDX39A-216ENST00000591275 GLT1D1Q96MS3 346 aa19.1■□□□□ 0.65
DDX39A-216ENST00000591275 ZBED9Q6R2W3 1325 aa19.09■□□□□ 0.65
DDX39A-216ENST00000591275 DNAJC25-GNG10A0A024R161 153 aa19.09■□□□□ 0.65
DDX39A-216ENST00000591275 DUSP11O75319 330 aaKnown RBP19.09■□□□□ 0.65
DDX39A-216ENST00000591275 HNRNPUQ00839 825 aaKnown RBP eCLIP19.09■□□□□ 0.65
DDX39A-216ENST00000591275 UBE3CQ15386 1083 aa19.09■□□□□ 0.65
DDX39A-216ENST00000591275 TMEM240Q5SV17 173 aa19.09■□□□□ 0.65
DDX39A-216ENST00000591275 MAMDC4Q6UXC1 1216 aa19.09■□□□□ 0.65
DDX39A-216ENST00000591275 HAUS7Q99871 368 aa19.09■□□□□ 0.65
DDX39A-216ENST00000591275 PUS7LQ9H0K6 701 aaKnown RBP19.09■□□□□ 0.65
DDX39A-216ENST00000591275 PRDM12Q9H4Q4 367 aa19.09■□□□□ 0.65
DDX39A-216ENST00000591275 GREB1LQ9C091 1923 aaPredicted RBP19.08■□□□□ 0.65
DDX39A-216ENST00000591275 HMMRO75330 724 aa19.08■□□□□ 0.64
DDX39A-216ENST00000591275 NDUFB10O96000 172 aa19.08■□□□□ 0.64
DDX39A-216ENST00000591275 ASGR1P07306 291 aa19.08■□□□□ 0.64
DDX39A-216ENST00000591275 ACRP10323 421 aa19.08■□□□□ 0.64
DDX39A-216ENST00000591275 CSF2RAP15509 400 aa19.08■□□□□ 0.64
DDX39A-216ENST00000591275 PPIGQ13427 754 aaKnown RBP eCLIP19.08■□□□□ 0.642e-10■■□□□ 11.9
DDX39A-216ENST00000591275 ACVR2BQ13705 512 aa19.08■□□□□ 0.64
DDX39A-216ENST00000591275 GAS2L1Q99501 681 aaPredicted RBP19.08■□□□□ 0.64
DDX39A-216ENST00000591275 PBX4Q9BYU1 374 aa19.08■□□□□ 0.64
DDX39A-216ENST00000591275 PPP1R12CQ9BZL4 782 aa19.08■□□□□ 0.64
DDX39A-216ENST00000591275 RAVER2Q9HCJ3 691 aaKnown RBP19.08■□□□□ 0.64
DDX39A-216ENST00000591275 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.08■□□□□ 0.64
DDX39A-216ENST00000591275 ELP1O95163 1332 aa19.07■□□□□ 0.64
DDX39A-216ENST00000591275 MROH7Q68CQ1 1323 aa19.07■□□□□ 0.64
DDX39A-216ENST00000591275 CHD7Q9P2D1 2997 aa19.07■□□□□ 0.64
DDX39A-216ENST00000591275 F5H6K3 240 aa19.07■□□□□ 0.64
DDX39A-216ENST00000591275 TNFRSF10AO00220 468 aa19.07■□□□□ 0.64
DDX39A-216ENST00000591275 RASA1P20936 1047 aa19.07■□□□□ 0.64
DDX39A-216ENST00000591275 CST5P28325 142 aaPredicted RBP19.07■□□□□ 0.64
DDX39A-216ENST00000591275 CDK7P50613 346 aa19.07■□□□□ 0.64
DDX39A-216ENST00000591275 KLRC3Q07444 240 aa19.07■□□□□ 0.64
DDX39A-216ENST00000591275 CCDC144BQ3MJ40 725 aa19.07■□□□□ 0.64
DDX39A-216ENST00000591275 RPAP2Q8IXW5 612 aaPredicted RBP19.07■□□□□ 0.64
DDX39A-216ENST00000591275 PRPF38AQ8NAV1 312 aaKnown RBP19.07■□□□□ 0.64
DDX39A-216ENST00000591275 PCSK9Q8NBP7 692 aaKnown RBP19.07■□□□□ 0.64
DDX39A-216ENST00000591275 KIFC2Q96AC6 838 aa19.07■□□□□ 0.64
DDX39A-216ENST00000591275 ARPP21Q9UBL0 812 aaPredicted RBP19.07■□□□□ 0.64
DDX39A-216ENST00000591275 CTDP1Q9Y5B0 961 aaPredicted RBP19.07■□□□□ 0.64
DDX39A-216ENST00000591275 ZBED4O75132 1171 aa19.06■□□□□ 0.64
DDX39A-216ENST00000591275 RAB11FIP3O75154 756 aa19.06■□□□□ 0.64
DDX39A-216ENST00000591275 GNASQ5JWF2 1037 aa19.06■□□□□ 0.64
DDX39A-216ENST00000591275 CCDC174Q6PII3 467 aa19.06■□□□□ 0.64
DDX39A-216ENST00000591275 ZNF365Q70YC5 407 aa19.06■□□□□ 0.64
DDX39A-216ENST00000591275 ANKRD35Q8N283 1001 aa19.06■□□□□ 0.64
DDX39A-216ENST00000591275 TMEM199Q8N511 208 aa19.06■□□□□ 0.64
DDX39A-216ENST00000591275 FGD4Q96M96 766 aa19.06■□□□□ 0.64
DDX39A-216ENST00000591275 MKNK2Q9HBH9 465 aa19.06■□□□□ 0.64
DDX39A-216ENST00000591275 SPC25Q9HBM1 224 aa19.06■□□□□ 0.64
DDX39A-216ENST00000591275 NYAP2Q9P242 653 aa19.06■□□□□ 0.64
DDX39A-216ENST00000591275 A0A0U1RQG5 324 aaPredicted RBP19.05■□□□□ 0.64
DDX39A-216ENST00000591275 ARVCFO00192 962 aa19.05■□□□□ 0.64
DDX39A-216ENST00000591275 RASIP1Q5U651 963 aa19.05■□□□□ 0.64
DDX39A-216ENST00000591275 ARMCX2Q7L311 632 aa19.05■□□□□ 0.64
DDX39A-216ENST00000591275 ZNF467Q7Z7K2 595 aaPredicted RBP19.05■□□□□ 0.64
DDX39A-216ENST00000591275 UPF3AQ9H1J1 476 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms