RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 LIMCH1Q9UPQ0 1083 aa19.87■□□□□ 0.77
RPRD1A-209ENST00000590898 HPS5Q9UPZ3 1129 aa19.87■□□□□ 0.77
RPRD1A-209ENST00000590898 KLRF2D3W0D1 207 aa19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 STAG2Q8N3U4 1231 aa19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 SNX21Q969T3 373 aa19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 GPCPD1Q9NPB8 672 aa19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 FBXO28Q9NVF7 368 aa19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 FRMPD2Q68DX3 1309 aaPredicted RBP19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 GOLGA8BA8MQT2 603 aa19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 GOLGA8HP0CJ92 632 aa19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 GCLCP48506 637 aaPredicted RBP19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 METAP2P50579 478 aaKnown RBP eCLIP19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 HERVK_113P62684 666 aa19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 TAF1CQ15572 869 aaPredicted RBP19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 TTBK2Q6IQ55 1244 aa19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 HSCBQ8IWL3 235 aa19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 CHMP4CQ96CF2 233 aa19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 ZSCAN31Q96LW9 406 aaPredicted RBP19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 ZFYVE28Q9HCC9 887 aa19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 ISY1Q9ULR0 285 aaKnown RBP19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 NAP1L2Q9ULW6 460 aaPredicted RBP19.86■□□□□ 0.77
RPRD1A-209ENST00000590898 MYH6P13533 1939 aa19.85■□□□□ 0.77
RPRD1A-209ENST00000590898 RXRAP19793 462 aa19.85■□□□□ 0.77
RPRD1A-209ENST00000590898 RTN1Q16799 776 aa19.85■□□□□ 0.77
RPRD1A-209ENST00000590898 MB21D1Q8N884 522 aa19.85■□□□□ 0.77
RPRD1A-209ENST00000590898 LARP6Q9BRS8 491 aaKnown RBP19.85■□□□□ 0.77
RPRD1A-209ENST00000590898 SPDYE16A6NNV3 312 aaPredicted RBP19.84■□□□□ 0.77
RPRD1A-209ENST00000590898 GOLGA8AA7E2F4 631 aa19.84■□□□□ 0.77
RPRD1A-209ENST00000590898 IKQ13123 557 aaPredicted RBP19.84■□□□□ 0.77
RPRD1A-209ENST00000590898 SMCR8Q8TEV9 937 aaPredicted RBP19.84■□□□□ 0.77
RPRD1A-209ENST00000590898 FAM217BQ9NTX9 383 aaPredicted RBP19.84■□□□□ 0.77
RPRD1A-209ENST00000590898 RNF186Q9NXI6 227 aa19.84■□□□□ 0.77
RPRD1A-209ENST00000590898 SAGE1Q9NXZ1 904 aa19.84■□□□□ 0.77
RPRD1A-209ENST00000590898 TLR2O60603 784 aa19.84■□□□□ 0.77
RPRD1A-209ENST00000590898 PFKFB2O60825 505 aa19.84■□□□□ 0.77
RPRD1A-209ENST00000590898 CYP2C8P10632 490 aa19.84■□□□□ 0.77
RPRD1A-209ENST00000590898 SYDE2Q5VT97 1194 aa19.84■□□□□ 0.77
RPRD1A-209ENST00000590898 JMYQ8N9B5 988 aa19.84■□□□□ 0.77
RPRD1A-209ENST00000590898 SLKQ9H2G2 1235 aaPredicted RBP19.84■□□□□ 0.77
RPRD1A-209ENST00000590898 RIOX1Q9H6W3 641 aa19.84■□□□□ 0.77
RPRD1A-209ENST00000590898 PRR12Q9ULL5 1215 aa19.84■□□□□ 0.77
RPRD1A-209ENST00000590898 COL11A1P12107 1806 aaPredicted RBP19.83■□□□□ 0.77
RPRD1A-209ENST00000590898 VWA5AO00534 786 aa19.83■□□□□ 0.77
RPRD1A-209ENST00000590898 ME3Q16798 604 aa19.83■□□□□ 0.77
RPRD1A-209ENST00000590898 CCDC144CPQ8IYA2 1237 aa19.83■□□□□ 0.77
RPRD1A-209ENST00000590898 KIFC2Q96AC6 838 aa19.83■□□□□ 0.77
RPRD1A-209ENST00000590898 SPZ1Q9BXG8 430 aa19.83■□□□□ 0.77
RPRD1A-209ENST00000590898 UBA5Q9GZZ9 404 aa19.83■□□□□ 0.77
RPRD1A-209ENST00000590898 SH2B1Q9NRF2 756 aaPredicted RBP19.83■□□□□ 0.77
RPRD1A-209ENST00000590898 RABGAP1Q9Y3P9 1069 aa19.83■□□□□ 0.77
RPRD1A-209ENST00000590898 DHX16O60231 1041 aaKnown RBP19.82■□□□□ 0.76
RPRD1A-209ENST00000590898 CDC27P30260 824 aa19.82■□□□□ 0.76
RPRD1A-209ENST00000590898 SLC16A2P36021 539 aa19.82■□□□□ 0.76
RPRD1A-209ENST00000590898 TMTC3Q6ZXV5 915 aa19.82■□□□□ 0.76
RPRD1A-209ENST00000590898 RAB11FIP4Q86YS3 637 aa19.82■□□□□ 0.76
RPRD1A-209ENST00000590898 BEGAINQ9BUH8 593 aa19.82■□□□□ 0.76
RPRD1A-209ENST00000590898 SLC38A10Q9HBR0 1119 aa19.82■□□□□ 0.76
RPRD1A-209ENST00000590898 WBP1LQ9NX94 342 aa19.82■□□□□ 0.76
RPRD1A-209ENST00000590898 ADD1P35611 737 aaKnown RBP19.82■□□□□ 0.76
RPRD1A-209ENST00000590898 CRHR2Q13324 411 aa19.82■□□□□ 0.76
RPRD1A-209ENST00000590898 ADGRF4Q8IZF3 695 aa19.82■□□□□ 0.76
RPRD1A-209ENST00000590898 ATG4CQ96DT6 458 aa19.82■□□□□ 0.76
RPRD1A-209ENST00000590898 ADGRA2Q96PE1 1338 aa19.82■□□□□ 0.76
RPRD1A-209ENST00000590898 ZBED4O75132 1171 aa19.81■□□□□ 0.76
RPRD1A-209ENST00000590898 TRPA1O75762 1119 aa19.81■□□□□ 0.76
RPRD1A-209ENST00000590898 CCT2P78371 535 aaKnown RBP19.81■□□□□ 0.76
RPRD1A-209ENST00000590898 SRBD1Q8N5C6 995 aaKnown RBP19.81■□□□□ 0.76
RPRD1A-209ENST00000590898 MTMR8Q96EF0 704 aa19.81■□□□□ 0.76
RPRD1A-209ENST00000590898 RANBP17Q9H2T7 1088 aaKnown RBP19.81■□□□□ 0.76
RPRD1A-209ENST00000590898 RBPJLQ9UBG7 517 aa19.81■□□□□ 0.76
RPRD1A-209ENST00000590898 PNMA2Q9UL42 364 aa19.81■□□□□ 0.76
RPRD1A-209ENST00000590898 ATP2A1O14983 1001 aa19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 CYTH3O43739 400 aa19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 OAZ1P54368 228 aa19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 NTRK3Q16288 839 aa19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 POTEEQ6S8J3 1075 aa19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 C17orf99Q6UX52 265 aa19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 NBPF11Q86T75 865 aa19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 JMJD4Q9H9V9 463 aa19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 MORF4L1Q9UBU8 362 aa19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 A0A0G2JMZ2 1700 aa19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 PLEKHA8P1O95397 391 aa19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 FUT2Q10981 343 aa19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 SCRN1Q12765 414 aa19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 STK3Q13188 491 aa19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 NOM1Q5C9Z4 860 aaKnown RBP19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 CPLX2Q6PUV4 134 aaKnown RBP19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 NOL8Q76FK4 1167 aaKnown RBP19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 REPS2Q8NFH8 660 aa19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 GTF3C6Q969F1 213 aa19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 CPVLQ9H3G5 476 aa19.8■□□□□ 0.76
RPRD1A-209ENST00000590898 SMCHD1A6NHR9 2005 aa19.79■□□□□ 0.76
RPRD1A-209ENST00000590898 K7ELQ4 463 aaPredicted RBP19.79■□□□□ 0.76
RPRD1A-209ENST00000590898 BCRP11274 1271 aa19.79■□□□□ 0.76
RPRD1A-209ENST00000590898 IFNAR1P17181 557 aa19.79■□□□□ 0.76
RPRD1A-209ENST00000590898 FAM110CQ1W6H9 321 aa19.79■□□□□ 0.76
RPRD1A-209ENST00000590898 SLC35G1Q2M3R5 365 aa19.79■□□□□ 0.76
RPRD1A-209ENST00000590898 SAMD1Q6SPF0 538 aaPredicted RBP19.79■□□□□ 0.76
RPRD1A-209ENST00000590898 CTDP1Q9Y5B0 961 aaPredicted RBP19.79■□□□□ 0.76
RPRD1A-209ENST00000590898 CPLX1O14810 134 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms