RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 SYAP1Q96A49 352 aaPredicted RBP19.56■□□□□ 0.72
GCDH-212ENST00000590530 GMCL1Q96IK5 515 aa19.56■□□□□ 0.72
GCDH-212ENST00000590530 LZTS2Q9BRK4 669 aa19.56■□□□□ 0.72
GCDH-212ENST00000590530 SPP2Q13103 211 aa19.55■□□□□ 0.72
GCDH-212ENST00000590530 VGLL4Q14135 290 aa19.55■□□□□ 0.72
GCDH-212ENST00000590530 WWC2Q6AWC2 1192 aa19.55■□□□□ 0.72
GCDH-212ENST00000590530 VCPKMTQ9H867 229 aa19.55■□□□□ 0.72
GCDH-212ENST00000590530 TFIP11Q9UBB9 837 aaKnown RBP19.55■□□□□ 0.72
GCDH-212ENST00000590530 ATAD5Q96QE3 1844 aa19.55■□□□□ 0.72
GCDH-212ENST00000590530 TMEM232C9JQI7 657 aa19.54■□□□□ 0.72
GCDH-212ENST00000590530 PPP1R11O60927 126 aaPredicted RBP19.54■□□□□ 0.72
GCDH-212ENST00000590530 BMP3P12645 472 aa19.54■□□□□ 0.72
GCDH-212ENST00000590530 MTMR2Q13614 643 aa19.54■□□□□ 0.72
GCDH-212ENST00000590530 NPY5RQ15761 445 aa19.54■□□□□ 0.72
GCDH-212ENST00000590530 GPATCH4Q5T3I0 446 aaKnown RBP19.54■□□□□ 0.72
GCDH-212ENST00000590530 CLMNQ96JQ2 1002 aa19.54■□□□□ 0.72
GCDH-212ENST00000590530 FTOQ9C0B1 505 aaKnown RBP eCLIP19.54■□□□□ 0.72
GCDH-212ENST00000590530 RBM27Q9P2N5 1060 aaKnown RBP19.54■□□□□ 0.72
GCDH-212ENST00000590530 SNCAIPQ9Y6H5 919 aa19.54■□□□□ 0.72
GCDH-212ENST00000590530 ZHX2Q9Y6X8 837 aa19.54■□□□□ 0.72
GCDH-212ENST00000590530 BTBD18B2RXH4 712 aa19.54■□□□□ 0.72
GCDH-212ENST00000590530 MMP1P03956 469 aa19.54■□□□□ 0.72
GCDH-212ENST00000590530 TAL1P17542 331 aaPredicted RBP19.54■□□□□ 0.72
GCDH-212ENST00000590530 ZNF445P59923 1031 aa19.54■□□□□ 0.72
GCDH-212ENST00000590530 ZSCAN23Q3MJ62 389 aa19.54■□□□□ 0.72
GCDH-212ENST00000590530 FEZ1Q99689 392 aa19.54■□□□□ 0.72
GCDH-212ENST00000590530 PICK1Q9NRD5 415 aa19.54■□□□□ 0.72
GCDH-212ENST00000590530 TMEM63CQ9P1W3 806 aa19.54■□□□□ 0.72
GCDH-212ENST00000590530 FSD2A1L4K1 749 aa19.53■□□□□ 0.72
GCDH-212ENST00000590530 DCAF8L1A6NGE4 600 aa19.53■□□□□ 0.72
GCDH-212ENST00000590530 TRIM75PA6NK02 468 aa19.53■□□□□ 0.72
GCDH-212ENST00000590530 U2AF2P26368 475 aaKnown RBP eCLIP19.53■□□□□ 0.723e-8■□□□□ 10.2
GCDH-212ENST00000590530 MAP3K9P80192 1104 aa19.53■□□□□ 0.72
GCDH-212ENST00000590530 NR5A1Q13285 461 aa19.53■□□□□ 0.72
GCDH-212ENST00000590530 NOM1Q5C9Z4 860 aaKnown RBP19.53■□□□□ 0.72
GCDH-212ENST00000590530 MYSM1Q5VVJ2 828 aa19.53■□□□□ 0.72
GCDH-212ENST00000590530 HEATR3Q7Z4Q2 680 aa19.53■□□□□ 0.72
GCDH-212ENST00000590530 USP28Q96RU2 1077 aa19.53■□□□□ 0.72
GCDH-212ENST00000590530 PHF20Q9BVI0 1012 aa19.53■□□□□ 0.72
GCDH-212ENST00000590530 GOPCQ9HD26 462 aa19.53■□□□□ 0.72
GCDH-212ENST00000590530 EMILIN3Q9NT22 766 aa19.53■□□□□ 0.72
GCDH-212ENST00000590530 RCOR1Q9UKL0 485 aa19.53■□□□□ 0.72
GCDH-212ENST00000590530 SMARCA1P28370 1054 aa19.52■□□□□ 0.72
GCDH-212ENST00000590530 NOL9Q5SY16 702 aaKnown RBP19.52■□□□□ 0.72
GCDH-212ENST00000590530 RRP36Q96EU6 259 aaKnown RBP19.52■□□□□ 0.72
GCDH-212ENST00000590530 ZNF408Q9H9D4 720 aa19.52■□□□□ 0.72
GCDH-212ENST00000590530 FBXO28Q9NVF7 368 aa19.52■□□□□ 0.72
GCDH-212ENST00000590530 RTEL1Q9NZ71 1219 aa19.52■□□□□ 0.72
GCDH-212ENST00000590530 SYNPO2Q9UMS6 1093 aa19.52■□□□□ 0.72
GCDH-212ENST00000590530 STXBP3O00186 592 aa19.52■□□□□ 0.71
GCDH-212ENST00000590530 PPP1R12BO60237 982 aaPredicted RBP19.52■□□□□ 0.71
GCDH-212ENST00000590530 XBP1P17861 261 aa19.52■□□□□ 0.71
GCDH-212ENST00000590530 EARS2Q5JPH6 523 aaKnown RBP19.52■□□□□ 0.71
GCDH-212ENST00000590530 DIS3L2Q8IYB7 885 aaKnown RBP19.52■□□□□ 0.71
GCDH-212ENST00000590530 COA7Q96BR5 231 aa19.52■□□□□ 0.71
GCDH-212ENST00000590530 KIAA1683Q9H0B3 1180 aa19.52■□□□□ 0.71
GCDH-212ENST00000590530 POLR3EQ9NVU0 708 aa19.52■□□□□ 0.71
GCDH-212ENST00000590530 DOCK1Q14185 1865 aa19.51■□□□□ 0.71
GCDH-212ENST00000590530 FAM205CA6NFA0 338 aa19.51■□□□□ 0.71
GCDH-212ENST00000590530 TTLL12Q14166 644 aaPredicted RBP19.51■□□□□ 0.71
GCDH-212ENST00000590530 SAFBQ15424 915 aaKnown RBP eCLIP19.51■□□□□ 0.71
GCDH-212ENST00000590530 SAMD1Q6SPF0 538 aaPredicted RBP19.51■□□□□ 0.71
GCDH-212ENST00000590530 MTMR8Q96EF0 704 aa19.51■□□□□ 0.71
GCDH-212ENST00000590530 GINM1Q9NU53 330 aa19.51■□□□□ 0.71
GCDH-212ENST00000590530 IKQ13123 557 aaPredicted RBP19.5■□□□□ 0.71
GCDH-212ENST00000590530 ZNF280CQ8ND82 737 aa19.5■□□□□ 0.71
GCDH-212ENST00000590530 WDR18Q9BV38 432 aa19.5■□□□□ 0.71
GCDH-212ENST00000590530 FOXP1Q9H334 677 aaPredicted RBP19.5■□□□□ 0.71
GCDH-212ENST00000590530 ELP3Q9H9T3 547 aa19.5■□□□□ 0.71
GCDH-212ENST00000590530 BARHL2Q9NY43 387 aa19.5■□□□□ 0.71
GCDH-212ENST00000590530 YEATS4O95619 227 aa19.5■□□□□ 0.71
GCDH-212ENST00000590530 NASPP49321 788 aaPredicted RBP19.5■□□□□ 0.71
GCDH-212ENST00000590530 CEBPZQ03701 1054 aaKnown RBP19.5■□□□□ 0.71
GCDH-212ENST00000590530 SH2D4AQ9H788 454 aa19.5■□□□□ 0.71
GCDH-212ENST00000590530 PRR12Q9ULL5 1215 aa19.5■□□□□ 0.71
GCDH-212ENST00000590530 AFG3L2Q9Y4W6 797 aa19.5■□□□□ 0.71
GCDH-212ENST00000590530 PAPPA2Q9BXP8 1791 aa19.49■□□□□ 0.71
GCDH-212ENST00000590530 GOLGA6L3A6NEY3 463 aa19.49■□□□□ 0.71
GCDH-212ENST00000590530 HMGCS2P54868 508 aa19.49■□□□□ 0.71
GCDH-212ENST00000590530 BACE1P56817 501 aa19.49■□□□□ 0.71
GCDH-212ENST00000590530 NLRP5P59047 1200 aa19.49■□□□□ 0.71
GCDH-212ENST00000590530 GNL2Q13823 731 aaKnown RBP19.49■□□□□ 0.71
GCDH-212ENST00000590530 QRICH1Q2TAL8 776 aa19.49■□□□□ 0.71
GCDH-212ENST00000590530 CCDC183Q5T5S1 534 aa19.49■□□□□ 0.71
GCDH-212ENST00000590530 SYDE2Q5VT97 1194 aa19.49■□□□□ 0.71
GCDH-212ENST00000590530 BTNL9Q6UXG8 535 aa19.49■□□□□ 0.71
GCDH-212ENST00000590530 LDHDQ86WU2 507 aa19.49■□□□□ 0.71
GCDH-212ENST00000590530 RASGRP4Q8TDF6 673 aa19.49■□□□□ 0.71
GCDH-212ENST00000590530 SEC63Q9UGP8 760 aaKnown RBP19.49■□□□□ 0.71
GCDH-212ENST00000590530 GOLGA6L4A6NEF3 574 aa19.48■□□□□ 0.71
GCDH-212ENST00000590530 NF2P35240 595 aa19.48■□□□□ 0.71
GCDH-212ENST00000590530 IREB2P48200 963 aaKnown RBP19.48■□□□□ 0.71
GCDH-212ENST00000590530 CDC37Q16543 378 aaPredicted RBP19.48■□□□□ 0.71
GCDH-212ENST00000590530 PGBD1Q96JS3 809 aa19.48■□□□□ 0.71
GCDH-212ENST00000590530 OTOFQ9HC10 1997 aa19.48■□□□□ 0.71
GCDH-212ENST00000590530 PNMA6FA0A0J9YX94 578 aa19.48■□□□□ 0.71
GCDH-212ENST00000590530 ZBTB5O15062 677 aa19.48■□□□□ 0.71
GCDH-212ENST00000590530 VCAM1P19320 739 aa19.48■□□□□ 0.71
GCDH-212ENST00000590530 TPRNQ4KMQ1 711 aa19.48■□□□□ 0.71
GCDH-212ENST00000590530 L1TD1Q5T7N2 865 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms