RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 FAM160B2Q86V87 743 aa16.5■□□□□ 0.23
SCAMP4-212ENST00000590266 CHURC1Q8WUH1 139 aa16.5■□□□□ 0.23
SCAMP4-212ENST00000590266 DCAF4Q8WV16 495 aa16.5■□□□□ 0.23
SCAMP4-212ENST00000590266 TRIB2Q92519 343 aa16.5■□□□□ 0.23
SCAMP4-212ENST00000590266 APBA2Q99767 749 aa16.5■□□□□ 0.23
SCAMP4-212ENST00000590266 LSG1Q9H089 658 aaKnown RBP16.5■□□□□ 0.23
SCAMP4-212ENST00000590266 RNF208Q9H0X6 261 aa16.5■□□□□ 0.23
SCAMP4-212ENST00000590266 UNC93B1Q9H1C4 597 aa16.5■□□□□ 0.23
SCAMP4-212ENST00000590266 MROH8Q9H579 483 aa16.5■□□□□ 0.23
SCAMP4-212ENST00000590266 KAT14Q9H8E8 782 aa16.5■□□□□ 0.23
SCAMP4-212ENST00000590266 ADAMTS5Q9UNA0 930 aa16.5■□□□□ 0.23
SCAMP4-212ENST00000590266 E7EWF7 191 aa16.49■□□□□ 0.23
SCAMP4-212ENST00000590266 SLC25A27O95847 323 aa16.49■□□□□ 0.23
SCAMP4-212ENST00000590266 EN2P19622 333 aaPredicted RBP16.49■□□□□ 0.23
SCAMP4-212ENST00000590266 ADORA2AP29274 412 aa16.49■□□□□ 0.23
SCAMP4-212ENST00000590266 SLC16A2P36021 539 aa16.49■□□□□ 0.23
SCAMP4-212ENST00000590266 NOVP48745 357 aa16.49■□□□□ 0.23
SCAMP4-212ENST00000590266 CCDC178Q5BJE1 867 aa16.49■□□□□ 0.23
SCAMP4-212ENST00000590266 CYB5R4Q7L1T6 521 aa16.49■□□□□ 0.23
SCAMP4-212ENST00000590266 RIOX2Q8IUF8 465 aa16.49■□□□□ 0.23
SCAMP4-212ENST00000590266 SHCBP1Q8NEM2 672 aa16.49■□□□□ 0.23
SCAMP4-212ENST00000590266 REPS2Q8NFH8 660 aa16.49■□□□□ 0.23
SCAMP4-212ENST00000590266 TTC14Q96N46 770 aa16.49■□□□□ 0.23
SCAMP4-212ENST00000590266 HOMER2Q9NSB8 354 aa16.49■□□□□ 0.23
SCAMP4-212ENST00000590266 ZNF214Q9UL59 606 aaPredicted RBP16.49■□□□□ 0.23
SCAMP4-212ENST00000590266 FCER1AP12319 257 aa16.48■□□□□ 0.23
SCAMP4-212ENST00000590266 GRB14Q14449 540 aa16.48■□□□□ 0.23
SCAMP4-212ENST00000590266 TTBK2Q6IQ55 1244 aa16.48■□□□□ 0.23
SCAMP4-212ENST00000590266 CCDC174Q6PII3 467 aa16.48■□□□□ 0.23
SCAMP4-212ENST00000590266 CHST3Q7LGC8 479 aa16.48■□□□□ 0.23
SCAMP4-212ENST00000590266 DGKHQ86XP1 1220 aa16.48■□□□□ 0.23
SCAMP4-212ENST00000590266 ENAHQ8N8S7 591 aaPredicted RBP16.48■□□□□ 0.23
SCAMP4-212ENST00000590266 PNMA1Q8ND90 353 aa16.48■□□□□ 0.23
SCAMP4-212ENST00000590266 USP6NLQ92738 828 aa16.48■□□□□ 0.23
SCAMP4-212ENST00000590266 MMP19Q99542 508 aa16.48■□□□□ 0.23
SCAMP4-212ENST00000590266 TEX13BQ9BXU2 312 aa16.48■□□□□ 0.23
SCAMP4-212ENST00000590266 SLC38A10Q9HBR0 1119 aa16.48■□□□□ 0.23
SCAMP4-212ENST00000590266 PDE4DIPQ5VU43 2346 aa16.47■□□□□ 0.23
SCAMP4-212ENST00000590266 SLC34A2O95436 690 aa16.47■□□□□ 0.23
SCAMP4-212ENST00000590266 GOLGA8HP0CJ92 632 aa16.47■□□□□ 0.23
SCAMP4-212ENST00000590266 PDHBP11177 359 aa16.47■□□□□ 0.23
SCAMP4-212ENST00000590266 NT5C2P49902 561 aa16.47■□□□□ 0.23
SCAMP4-212ENST00000590266 KCTD2Q14681 263 aa16.47■□□□□ 0.23
SCAMP4-212ENST00000590266 IFIT1BQ5T764 474 aaKnown RBP16.47■□□□□ 0.23
SCAMP4-212ENST00000590266 STOX1Q6ZVD7 989 aa16.47■□□□□ 0.23
SCAMP4-212ENST00000590266 NCOA7Q8NI08 942 aa16.47■□□□□ 0.23
SCAMP4-212ENST00000590266 NPLOC4Q8TAT6 608 aa16.47■□□□□ 0.23
SCAMP4-212ENST00000590266 PRR12Q9ULL5 1215 aa16.47■□□□□ 0.23
SCAMP4-212ENST00000590266 RIPK3Q9Y572 518 aa16.47■□□□□ 0.23
SCAMP4-212ENST00000590266 IFIT3O14879 490 aaKnown RBP16.46■□□□□ 0.23
SCAMP4-212ENST00000590266 SLC27A2O14975 620 aa16.46■□□□□ 0.23
SCAMP4-212ENST00000590266 STRNO43815 780 aa16.46■□□□□ 0.23
SCAMP4-212ENST00000590266 PGK2P07205 417 aa16.46■□□□□ 0.23
SCAMP4-212ENST00000590266 XRCC5P13010 732 aaKnown RBP16.46■□□□□ 0.23
SCAMP4-212ENST00000590266 PRKAR2AP13861 404 aaKnown RBP16.46■□□□□ 0.23
SCAMP4-212ENST00000590266 COPB2P35606 906 aa16.46■□□□□ 0.23
SCAMP4-212ENST00000590266 TRMT44Q8IYL2 757 aaKnown RBP16.46■□□□□ 0.23
SCAMP4-212ENST00000590266 FLRT1Q9NZU1 646 aa16.46■□□□□ 0.23
SCAMP4-212ENST00000590266 A0A0G2JMZ2 1700 aa16.45■□□□□ 0.22
SCAMP4-212ENST00000590266 TNRC18O15417 2968 aaPredicted RBP16.45■□□□□ 0.22
SCAMP4-212ENST00000590266 ERICH2A1L162 156 aa16.45■□□□□ 0.22
SCAMP4-212ENST00000590266 COBLO75128 1261 aa16.45■□□□□ 0.22
SCAMP4-212ENST00000590266 TAL1P17542 331 aaPredicted RBP16.45■□□□□ 0.22
SCAMP4-212ENST00000590266 ZNF543Q08ER8 600 aa16.45■□□□□ 0.22
SCAMP4-212ENST00000590266 SYDE2Q5VT97 1194 aa16.45■□□□□ 0.22
SCAMP4-212ENST00000590266 MFSD14CQ5VZR4 134 aa16.45■□□□□ 0.22
SCAMP4-212ENST00000590266 CREB3L3Q68CJ9 461 aa16.45■□□□□ 0.22
SCAMP4-212ENST00000590266 AGBL1Q96MI9 1066 aa16.45■□□□□ 0.22
SCAMP4-212ENST00000590266 DEFB118Q96PH6 123 aa16.45■□□□□ 0.22
SCAMP4-212ENST00000590266 HMX1Q9NP08 348 aaPredicted RBP16.45■□□□□ 0.22
SCAMP4-212ENST00000590266 SLC5A4Q9NY91 659 aa16.45■□□□□ 0.22
SCAMP4-212ENST00000590266 MGAMO43451 1857 aa16.44■□□□□ 0.22
SCAMP4-212ENST00000590266 FDX1P10109 184 aa16.44■□□□□ 0.22
SCAMP4-212ENST00000590266 ALAS1P13196 640 aa16.44■□□□□ 0.22
SCAMP4-212ENST00000590266 CYP2C19P33261 490 aa16.44■□□□□ 0.22
SCAMP4-212ENST00000590266 CACNB2Q08289 660 aaPredicted RBP16.44■□□□□ 0.22
SCAMP4-212ENST00000590266 SART3Q15020 963 aaKnown RBP16.44■□□□□ 0.22
SCAMP4-212ENST00000590266 DDX11Q96FC9 970 aa16.44■□□□□ 0.22
SCAMP4-212ENST00000590266 UBA5Q9GZZ9 404 aa16.44■□□□□ 0.22
SCAMP4-212ENST00000590266 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.44■□□□□ 0.225e-6■■■□□ 16.8
SCAMP4-212ENST00000590266 CPVLQ9H3G5 476 aa16.44■□□□□ 0.22
SCAMP4-212ENST00000590266 LAMA4Q16363 1823 aa16.44■□□□□ 0.22
SCAMP4-212ENST00000590266 RPTORQ8N122 1335 aa16.44■□□□□ 0.22
SCAMP4-212ENST00000590266 ATP2A1O14983 1001 aa16.43■□□□□ 0.22
SCAMP4-212ENST00000590266 DHX16O60231 1041 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-212ENST00000590266 PLA2G6O60733 806 aa16.43■□□□□ 0.22
SCAMP4-212ENST00000590266 TFRCP02786 760 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-212ENST00000590266 GJB1P08034 283 aa16.43■□□□□ 0.22
SCAMP4-212ENST00000590266 CNGA1P29973 690 aa16.43■□□□□ 0.22
SCAMP4-212ENST00000590266 OAZ1P54368 228 aa16.43■□□□□ 0.22
SCAMP4-212ENST00000590266 WTAPQ15007 396 aa16.43■□□□□ 0.22
SCAMP4-212ENST00000590266 TMEM67Q5HYA8 995 aa16.43■□□□□ 0.22
SCAMP4-212ENST00000590266 GPATCH4Q5T3I0 446 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-212ENST00000590266 RNF20Q5VTR2 975 aa16.43■□□□□ 0.22
SCAMP4-212ENST00000590266 ABRAQ8N0Z2 381 aa16.43■□□□□ 0.22
SCAMP4-212ENST00000590266 ANKRD35Q8N283 1001 aa16.43■□□□□ 0.22
SCAMP4-212ENST00000590266 U2AF1L4Q8WU68 220 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-212ENST00000590266 CCPG1Q9ULG6 757 aa16.43■□□□□ 0.22
SCAMP4-212ENST00000590266 CENPFP49454 3210 aa16.42■□□□□ 0.22
SCAMP4-212ENST00000590266 HOXC6P09630 235 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms