RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 USP17L10C9JJH3 530 aa20.08■□□□□ 0.81
CXXC1-212ENST00000589940 hCG_1984214I3L0E3 225 aa20.08■□□□□ 0.81
CXXC1-212ENST00000589940 STXBP3O00186 592 aa20.08■□□□□ 0.81
CXXC1-212ENST00000589940 IREB2P48200 963 aaKnown RBP20.08■□□□□ 0.81
CXXC1-212ENST00000589940 FAM83BQ5T0W9 1011 aa20.08■□□□□ 0.81
CXXC1-212ENST00000589940 ZNF713Q8N859 430 aaPredicted RBP20.08■□□□□ 0.81
CXXC1-212ENST00000589940 LPAR1Q92633 364 aa20.08■□□□□ 0.81
CXXC1-212ENST00000589940 BRMS1Q9HCU9 246 aa20.08■□□□□ 0.81
CXXC1-212ENST00000589940 CALML3P27482 149 aa20.08■□□□□ 0.8
CXXC1-212ENST00000589940 KRT2P35908 639 aa20.08■□□□□ 0.8
CXXC1-212ENST00000589940 NLRP5P59047 1200 aa20.08■□□□□ 0.8
CXXC1-212ENST00000589940 IKQ13123 557 aaPredicted RBP20.08■□□□□ 0.8
CXXC1-212ENST00000589940 NPY5RQ15761 445 aa20.08■□□□□ 0.8
CXXC1-212ENST00000589940 ATL3Q6DD88 541 aa20.08■□□□□ 0.8
CXXC1-212ENST00000589940 TYW1BQ6NUM6 668 aa20.08■□□□□ 0.8
CXXC1-212ENST00000589940 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.08■□□□□ 0.8
CXXC1-212ENST00000589940 NOSTRINQ8IVI9 506 aa20.08■□□□□ 0.8
CXXC1-212ENST00000589940 ZNF280CQ8ND82 737 aa20.08■□□□□ 0.8
CXXC1-212ENST00000589940 CCDC12Q8WUD4 166 aaPredicted RBP20.08■□□□□ 0.8
CXXC1-212ENST00000589940 ZBTB5O15062 677 aa20.07■□□□□ 0.8
CXXC1-212ENST00000589940 STAT2P52630 851 aa20.07■□□□□ 0.8
CXXC1-212ENST00000589940 USP14P54578 494 aa20.07■□□□□ 0.8
CXXC1-212ENST00000589940 SPP2Q13103 211 aa20.07■□□□□ 0.8
CXXC1-212ENST00000589940 VGLL4Q14135 290 aa20.07■□□□□ 0.8
CXXC1-212ENST00000589940 SYDE2Q5VT97 1194 aa20.07■□□□□ 0.8
CXXC1-212ENST00000589940 MYSM1Q5VVJ2 828 aa20.07■□□□□ 0.8
CXXC1-212ENST00000589940 TMEM87AQ8NBN3 555 aa20.07■□□□□ 0.8
CXXC1-212ENST00000589940 ZNF396Q96N95 335 aaPredicted RBP20.07■□□□□ 0.8
CXXC1-212ENST00000589940 GDPD2Q9HCC8 539 aa20.07■□□□□ 0.8
CXXC1-212ENST00000589940 ZHX2Q9Y6X8 837 aa20.07■□□□□ 0.8
CXXC1-212ENST00000589940 FIBPO43427 364 aa20.07■□□□□ 0.8
CXXC1-212ENST00000589940 MTMR2Q13614 643 aa20.07■□□□□ 0.8
CXXC1-212ENST00000589940 OXER1Q8TDS5 423 aa20.07■□□□□ 0.8
CXXC1-212ENST00000589940 CFAP45Q9UL16 551 aa20.07■□□□□ 0.8
CXXC1-212ENST00000589940 CSADQ9Y600 493 aa20.07■□□□□ 0.8
CXXC1-212ENST00000589940 SNCAIPQ9Y6H5 919 aa20.07■□□□□ 0.8
CXXC1-212ENST00000589940 TCHHQ07283 1943 aa20.06■□□□□ 0.8
CXXC1-212ENST00000589940 PAPPA2Q9BXP8 1791 aa20.06■□□□□ 0.8
CXXC1-212ENST00000589940 PLA2G6O60733 806 aa20.06■□□□□ 0.8
CXXC1-212ENST00000589940 PRPF40AO75400 957 aaKnown RBP20.06■□□□□ 0.8
CXXC1-212ENST00000589940 BACE1P56817 501 aa20.06■□□□□ 0.8
CXXC1-212ENST00000589940 NR5A1Q13285 461 aa20.06■□□□□ 0.8
CXXC1-212ENST00000589940 CSPP1Q1MSJ5 1256 aa20.06■□□□□ 0.8
CXXC1-212ENST00000589940 MAP1SQ66K74 1059 aaPredicted RBP20.06■□□□□ 0.8
CXXC1-212ENST00000589940 SCAND2PQ9GZW5 306 aaPredicted RBP20.06■□□□□ 0.8
CXXC1-212ENST00000589940 LMBRD1Q9NUN5 540 aa20.06■□□□□ 0.8
CXXC1-212ENST00000589940 TFIP11Q9UBB9 837 aaKnown RBP20.06■□□□□ 0.8
CXXC1-212ENST00000589940 WDR46O15213 610 aaKnown RBP20.06■□□□□ 0.8
CXXC1-212ENST00000589940 NAPAP54920 295 aa20.06■□□□□ 0.8
CXXC1-212ENST00000589940 GALNT17Q6IS24 598 aa20.06■□□□□ 0.8
CXXC1-212ENST00000589940 CHURC1Q8WUH1 139 aa20.06■□□□□ 0.8
CXXC1-212ENST00000589940 MAP3K11Q16584 847 aa20.05■□□□□ 0.8
CXXC1-212ENST00000589940 LDHDQ86WU2 507 aa20.05■□□□□ 0.8
CXXC1-212ENST00000589940 PCDHA4Q9UN74 947 aa20.05■□□□□ 0.8
CXXC1-212ENST00000589940 MYH15Q9Y2K3 1946 aa20.05■□□□□ 0.8
CXXC1-212ENST00000589940 CDC37Q16543 378 aaPredicted RBP20.04■□□□□ 0.8
CXXC1-212ENST00000589940 QRICH1Q2TAL8 776 aa20.04■□□□□ 0.8
CXXC1-212ENST00000589940 FAM160B2Q86V87 743 aa20.04■□□□□ 0.8
CXXC1-212ENST00000589940 DAGLBQ8NCG7 672 aa20.04■□□□□ 0.8
CXXC1-212ENST00000589940 ZMYND12Q9H0C1 365 aa20.04■□□□□ 0.8
CXXC1-212ENST00000589940 EMILIN3Q9NT22 766 aa20.04■□□□□ 0.8
CXXC1-212ENST00000589940 FEM1BQ9UK73 627 aa20.04■□□□□ 0.8
CXXC1-212ENST00000589940 PRR12Q9ULL5 1215 aa20.04■□□□□ 0.8
CXXC1-212ENST00000589940 TRIM75PA6NK02 468 aa20.04■□□□□ 0.8
CXXC1-212ENST00000589940 PPP1R11O60927 126 aaPredicted RBP20.04■□□□□ 0.8
CXXC1-212ENST00000589940 TTLL12Q14166 644 aaPredicted RBP20.04■□□□□ 0.8
CXXC1-212ENST00000589940 PPP1R18Q6NYC8 613 aa20.04■□□□□ 0.8
CXXC1-212ENST00000589940 ANKRD13AQ8IZ07 590 aa20.04■□□□□ 0.8
CXXC1-212ENST00000589940 USP28Q96RU2 1077 aa20.04■□□□□ 0.8
CXXC1-212ENST00000589940 NMRK2Q9NPI5 230 aa20.04■□□□□ 0.8
CXXC1-212ENST00000589940 AFG3L2Q9Y4W6 797 aa20.04■□□□□ 0.8
CXXC1-212ENST00000589940 OTOFQ9HC10 1997 aa20.04■□□□□ 0.8
CXXC1-212ENST00000589940 C19orf81C9J6K1 198 aa20.03■□□□□ 0.8
CXXC1-212ENST00000589940 BLIDQ8IZY5 108 aa20.03■□□□□ 0.8
CXXC1-212ENST00000589940 TNFRSF25Q93038 417 aa20.03■□□□□ 0.8
CXXC1-212ENST00000589940 PHIPQ8WWQ0 1821 aa20.03■□□□□ 0.8
CXXC1-212ENST00000589940 ESYT2A0FGR8 921 aa20.03■□□□□ 0.8
CXXC1-212ENST00000589940 VCAM1P19320 739 aa20.03■□□□□ 0.8
CXXC1-212ENST00000589940 ARMC9Q7Z3E5 817 aa20.03■□□□□ 0.8
CXXC1-212ENST00000589940 COA7Q96BR5 231 aa20.03■□□□□ 0.8
CXXC1-212ENST00000589940 SPATA32Q96LK8 384 aa20.03■□□□□ 0.8
CXXC1-212ENST00000589940 C6orf50Q9HD87 102 aa20.03■□□□□ 0.8
CXXC1-212ENST00000589940 ELP1O95163 1332 aa20.03■□□□□ 0.8
CXXC1-212ENST00000589940 GNA11P29992 359 aa20.02■□□□□ 0.8
CXXC1-212ENST00000589940 DGKZQ13574 1117 aa20.02■□□□□ 0.8
CXXC1-212ENST00000589940 MOB2Q70IA6 237 aa20.02■□□□□ 0.8
CXXC1-212ENST00000589940 LEO1Q8WVC0 666 aaPredicted RBP20.02■□□□□ 0.8
CXXC1-212ENST00000589940 C12orf42Q96LP6 360 aa20.02■□□□□ 0.8
CXXC1-212ENST00000589940 FTOQ9C0B1 505 aaKnown RBP eCLIP20.02■□□□□ 0.8
CXXC1-212ENST00000589940 SMCO2A6NFE2 343 aa20.02■□□□□ 0.79
CXXC1-212ENST00000589940 TRAF5O00463 557 aa20.02■□□□□ 0.79
CXXC1-212ENST00000589940 ZNF526Q8TF50 670 aaPredicted RBP20.02■□□□□ 0.79
CXXC1-212ENST00000589940 KIFC2Q96AC6 838 aa20.02■□□□□ 0.79
CXXC1-212ENST00000589940 POLR3EQ9NVU0 708 aa20.02■□□□□ 0.79
CXXC1-212ENST00000589940 RTEL1Q9NZ71 1219 aa20.02■□□□□ 0.79
CXXC1-212ENST00000589940 HMGCS2P54868 508 aa20.01■□□□□ 0.79
CXXC1-212ENST00000589940 CEBPZQ03701 1054 aaKnown RBP20.01■□□□□ 0.79
CXXC1-212ENST00000589940 RILPL1Q5EBL4 403 aa20.01■□□□□ 0.79
CXXC1-212ENST00000589940 RBM46Q8TBY0 533 aaKnown RBP20.01■□□□□ 0.79
CXXC1-212ENST00000589940 M0R2N6 131 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms