RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 SUGT1Q9Y2Z0 365 aa12.08□□□□□ -0.48
ZNF540-208ENST00000589857 A0A1B0GUL6 1792 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 G3V3G9 751 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 BIN1O00499 593 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 UFL1O94874 794 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 TSPY3P0CV98 308 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 TSPY8P0CW00 308 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 SKILP12757 684 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 ERCC5P28715 1186 aaPredicted RBP12.07□□□□□ -0.48
ZNF540-208ENST00000589857 TOB1P50616 345 aaPredicted RBP12.07□□□□□ -0.48
ZNF540-208ENST00000589857 ZNF157P51786 506 aaPredicted RBP12.07□□□□□ -0.48
ZNF540-208ENST00000589857 FANCCQ00597 558 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 GRM4Q14833 912 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 PKN1Q16512 942 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 DCAF8Q5TAQ9 597 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 ARL6IP4Q66PJ3 421 aaKnown RBP12.07□□□□□ -0.48
ZNF540-208ENST00000589857 KRT26Q7Z3Y9 468 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 SULF1Q8IWU6 871 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 MICALL2Q8IY33 904 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 CCDC82Q8N4S0 544 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 ZNF384Q8TF68 577 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 CACTINQ8WUQ7 758 aaKnown RBP12.07□□□□□ -0.48
ZNF540-208ENST00000589857 CLIC6Q96NY7 704 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 PDCL3Q9H2J4 239 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 GBA2Q9HCG7 927 aaPredicted RBP12.07□□□□□ -0.48
ZNF540-208ENST00000589857 IFNKQ9P0W0 207 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 VPS54Q9P1Q0 977 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 PCDHB6Q9Y5E3 794 aa12.07□□□□□ -0.48
ZNF540-208ENST00000589857 CYP2D7A0A087X1C5 515 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 hCG_1984214I3L0E3 225 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 LAD1O00515 517 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 POLR2DO15514 142 aaKnown RBP12.06□□□□□ -0.48
ZNF540-208ENST00000589857 PRDM1O75626 825 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 PLEKHA8P1O95397 391 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 SLFN14P0C7P3 912 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 IL1R1P14778 569 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 KLRK1P26718 216 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 SMARCA1P28370 1054 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 TFAP4Q01664 338 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 NR5A1Q13285 461 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 ORC2Q13416 577 aaPredicted RBP12.06□□□□□ -0.48
ZNF540-208ENST00000589857 PNOCQ13519 176 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 SYCP1Q15431 976 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 LONRF3Q496Y0 759 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 GLIPR1L2Q4G1C9 344 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 TMC6Q7Z403 805 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 FILIP1Q7Z7B0 1213 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 METTL16Q86W50 562 aaKnown RBP12.06□□□□□ -0.48
ZNF540-208ENST00000589857 FCHSD1Q86WN1 690 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 ZNF713Q8N859 430 aaPredicted RBP12.06□□□□□ -0.48
ZNF540-208ENST00000589857 DAGLBQ8NCG7 672 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 PNMA1Q8ND90 353 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 ENOX1Q8TC92 643 aaKnown RBP12.06□□□□□ -0.48
ZNF540-208ENST00000589857 FAM163AQ96GL9 167 aaPredicted RBP12.06□□□□□ -0.48
ZNF540-208ENST00000589857 XPO4Q9C0E2 1151 aaKnown RBP12.06□□□□□ -0.48
ZNF540-208ENST00000589857 RMND1Q9NWS8 449 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 TAOK2Q9UL54 1235 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 PCDHA5Q9Y5H7 936 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 TRPM7Q96QT4 1865 aa12.06□□□□□ -0.48
ZNF540-208ENST00000589857 NPM3O75607 178 aaKnown RBP12.05□□□□□ -0.48
ZNF540-208ENST00000589857 TNNT1P13805 278 aa12.05□□□□□ -0.48
ZNF540-208ENST00000589857 LONP1P36776 959 aaKnown RBP12.05□□□□□ -0.48
ZNF540-208ENST00000589857 PLCD1P51178 756 aa12.05□□□□□ -0.48
ZNF540-208ENST00000589857 UBASH3AP57075 661 aa12.05□□□□□ -0.48
ZNF540-208ENST00000589857 ATP2C1P98194 919 aaPredicted RBP12.05□□□□□ -0.48
ZNF540-208ENST00000589857 MDM2Q00987 491 aaPredicted RBP12.05□□□□□ -0.48
ZNF540-208ENST00000589857 C1QBPQ07021 282 aaKnown RBP12.05□□□□□ -0.48
ZNF540-208ENST00000589857 MORC3Q14149 939 aa12.05□□□□□ -0.48
ZNF540-208ENST00000589857 NCAPHQ15003 741 aa12.05□□□□□ -0.48
ZNF540-208ENST00000589857 PRPF38BQ5VTL8 546 aaKnown RBP12.05□□□□□ -0.48
ZNF540-208ENST00000589857 CTU1Q7Z7A3 348 aaKnown RBP12.05□□□□□ -0.48
ZNF540-208ENST00000589857 IQUBQ8NA54 791 aa12.05□□□□□ -0.48
ZNF540-208ENST00000589857 TNFRSF25Q93038 417 aa12.05□□□□□ -0.48
ZNF540-208ENST00000589857 FBXW7Q969H0 707 aa12.05□□□□□ -0.48
ZNF540-208ENST00000589857 GSDMAQ96QA5 445 aa12.05□□□□□ -0.48
ZNF540-208ENST00000589857 CTAGE1Q96RT6 745 aa12.05□□□□□ -0.48
ZNF540-208ENST00000589857 CSRNP2Q9H175 543 aa12.05□□□□□ -0.48
ZNF540-208ENST00000589857 SERTAD1Q9UHV2 236 aa12.05□□□□□ -0.48
ZNF540-208ENST00000589857 NRBP1Q9UHY1 535 aa12.05□□□□□ -0.48
ZNF540-208ENST00000589857 MAN1B1Q9UKM7 699 aa12.05□□□□□ -0.48
ZNF540-208ENST00000589857 PCDHA4Q9UN74 947 aa12.05□□□□□ -0.48
ZNF540-208ENST00000589857 GPR75-ASB3A0A0A6YYF3 556 aa12.04□□□□□ -0.48
ZNF540-208ENST00000589857 CCDC194A0A1B0GVG4 234 aa12.04□□□□□ -0.48
ZNF540-208ENST00000589857 GOLGA6L9A6NEM1 432 aa12.04□□□□□ -0.48
ZNF540-208ENST00000589857 ACTN4O43707 911 aaKnown RBP12.04□□□□□ -0.48
ZNF540-208ENST00000589857 MYL1P05976 194 aa12.04□□□□□ -0.48
ZNF540-208ENST00000589857 TOP1P11387 765 aaKnown RBP12.04□□□□□ -0.48
ZNF540-208ENST00000589857 CDK11BP21127 795 aaKnown RBP12.04□□□□□ -0.48
ZNF540-208ENST00000589857 SARSP49591 514 aaKnown RBP12.04□□□□□ -0.48
ZNF540-208ENST00000589857 HIRAP54198 1017 aaPredicted RBP12.04□□□□□ -0.48
ZNF540-208ENST00000589857 FKBP1BP68106 108 aa12.04□□□□□ -0.48
ZNF540-208ENST00000589857 LRMPQ12912 555 aa12.04□□□□□ -0.48
ZNF540-208ENST00000589857 PTPN14Q15678 1187 aa12.04□□□□□ -0.48
ZNF540-208ENST00000589857 CCDC144BQ3MJ40 725 aa12.04□□□□□ -0.48
ZNF540-208ENST00000589857 CFAP100Q494V2 611 aa12.04□□□□□ -0.48
ZNF540-208ENST00000589857 FAM47AQ5JRC9 791 aa12.04□□□□□ -0.48
ZNF540-208ENST00000589857 TEX11Q8IYF3 940 aa12.04□□□□□ -0.48
ZNF540-208ENST00000589857 BLIDQ8IZY5 108 aa12.04□□□□□ -0.48
ZNF540-208ENST00000589857 SRBD1Q8N5C6 995 aaKnown RBP12.04□□□□□ -0.48
ZNF540-208ENST00000589857 ANKRD20A12PQ8NF67 263 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms