RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 PARP14Q460N5 1801 aa24.79■■□□□ 1.56
R3HDM4-204ENST00000589428 TMEM232C9JQI7 657 aa24.79■■□□□ 1.56
R3HDM4-204ENST00000589428 PDHBP11177 359 aa24.79■■□□□ 1.56
R3HDM4-204ENST00000589428 STAT2P52630 851 aa24.79■■□□□ 1.56
R3HDM4-204ENST00000589428 LACTBP83111 547 aaPredicted RBP24.79■■□□□ 1.56
R3HDM4-204ENST00000589428 KCTD1Q719H9 257 aa24.79■■□□□ 1.56
R3HDM4-204ENST00000589428 MB21D1Q8N884 522 aa24.79■■□□□ 1.56
R3HDM4-204ENST00000589428 CD99L2Q8TCZ2 262 aa24.79■■□□□ 1.56
R3HDM4-204ENST00000589428 ATG4CQ96DT6 458 aa24.79■■□□□ 1.56
R3HDM4-204ENST00000589428 GPRC5AQ8NFJ5 357 aa24.78■■□□□ 1.56
R3HDM4-204ENST00000589428 ZSCAN31Q96LW9 406 aaPredicted RBP24.78■■□□□ 1.56
R3HDM4-204ENST00000589428 SH2B1Q9NRF2 756 aaPredicted RBP24.78■■□□□ 1.56
R3HDM4-204ENST00000589428 RLFQ13129 1914 aa24.78■■□□□ 1.56
R3HDM4-204ENST00000589428 A0A0G2JMZ2 1700 aa24.78■■□□□ 1.56
R3HDM4-204ENST00000589428 KLF18A0A0U1RQI7 1052 aa24.78■■□□□ 1.56
R3HDM4-204ENST00000589428 ERVK-9P63128 1117 aa24.78■■□□□ 1.56
R3HDM4-204ENST00000589428 ERVK-24P63145 666 aa24.78■■□□□ 1.56
R3HDM4-204ENST00000589428 ARHGEF6Q15052 776 aa24.78■■□□□ 1.56
R3HDM4-204ENST00000589428 FAM160B2Q86V87 743 aa24.78■■□□□ 1.56
R3HDM4-204ENST00000589428 PRPF38AQ8NAV1 312 aaKnown RBP24.78■■□□□ 1.56
R3HDM4-204ENST00000589428 CHURC1Q8WUH1 139 aa24.78■■□□□ 1.56
R3HDM4-204ENST00000589428 TXNRD2Q9NNW7 524 aa24.78■■□□□ 1.56
R3HDM4-204ENST00000589428 RBPJLQ9UBG7 517 aa24.78■■□□□ 1.56
R3HDM4-204ENST00000589428 KIFC2Q96AC6 838 aa24.77■■□□□ 1.56
R3HDM4-204ENST00000589428 DAXXQ9UER7 740 aaPredicted RBP24.77■■□□□ 1.56
R3HDM4-204ENST00000589428 SNHG28P0DPA3 235 aa24.76■■□□□ 1.55
R3HDM4-204ENST00000589428 ST3GAL1Q11201 340 aa24.76■■□□□ 1.55
R3HDM4-204ENST00000589428 APOA5Q6Q788 366 aa24.76■■□□□ 1.55
R3HDM4-204ENST00000589428 NFXL1Q6ZNB6 911 aa24.76■■□□□ 1.55
R3HDM4-204ENST00000589428 ZNF274Q96GC6 653 aaPredicted RBP24.76■■□□□ 1.55
R3HDM4-204ENST00000589428 CTDP1Q9Y5B0 961 aaPredicted RBP24.76■■□□□ 1.55
R3HDM4-204ENST00000589428 FRMPD2Q68DX3 1309 aaPredicted RBP24.76■■□□□ 1.55
R3HDM4-204ENST00000589428 GOLGA8BA8MQT2 603 aa24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 ECM2O94769 699 aaPredicted RBP24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 PDIA3P30101 505 aaKnown RBP24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 CCNA1P78396 465 aa24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 ZNF543Q08ER8 600 aa24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 STK3Q13188 491 aa24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 CUL4AQ13619 759 aa24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 GPATCH4Q5T3I0 446 aaKnown RBP24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 CCAR1Q8IX12 1150 aaKnown RBP24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 TMTC2Q8N394 836 aa24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 NECAB1Q8N987 351 aa24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 NAP1L2Q9ULW6 460 aaPredicted RBP24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 HPS5Q9UPZ3 1129 aa24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 CCDC69A6NI79 296 aa24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 PEX10O60683 326 aa24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 PLA2G6O60733 806 aa24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 CNMDO75829 334 aa24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 FCGRTP55899 365 aa24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 POTEEQ6S8J3 1075 aa24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 CATIPQ7Z7H3 387 aa24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 GPCPD1Q9NPB8 672 aa24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 BTBD7Q9P203 1132 aa24.75■■□□□ 1.55
R3HDM4-204ENST00000589428 VWA5AO00534 786 aa24.74■■□□□ 1.55
R3HDM4-204ENST00000589428 PSMC4P43686 418 aa24.74■■□□□ 1.55
R3HDM4-204ENST00000589428 ASPRV1Q53RT3 343 aa24.74■■□□□ 1.55
R3HDM4-204ENST00000589428 CTU1Q7Z7A3 348 aaKnown RBP24.74■■□□□ 1.55
R3HDM4-204ENST00000589428 RAB11FIP4Q86YS3 637 aa24.74■■□□□ 1.55
R3HDM4-204ENST00000589428 GTF3C6Q969F1 213 aa24.74■■□□□ 1.55
R3HDM4-204ENST00000589428 ARHGAP39Q9C0H5 1083 aa24.74■■□□□ 1.55
R3HDM4-204ENST00000589428 EFCC1Q9HA90 598 aa24.74■■□□□ 1.55
R3HDM4-204ENST00000589428 ADAMTS5Q9UNA0 930 aa24.74■■□□□ 1.55
R3HDM4-204ENST00000589428 SLC12A7Q9Y666 1083 aa24.74■■□□□ 1.55
R3HDM4-204ENST00000589428 PFKFB2O60825 505 aa24.73■■□□□ 1.55
R3HDM4-204ENST00000589428 ZBED4O75132 1171 aa24.73■■□□□ 1.55
R3HDM4-204ENST00000589428 FMNL1O95466 1100 aaPredicted RBP24.73■■□□□ 1.55
R3HDM4-204ENST00000589428 PARP1P09874 1014 aaKnown RBP24.73■■□□□ 1.55
R3HDM4-204ENST00000589428 PLS1Q14651 629 aa24.73■■□□□ 1.55
R3HDM4-204ENST00000589428 SPRYD3Q8NCJ5 442 aa24.73■■□□□ 1.55
R3HDM4-204ENST00000589428 MYL10Q9BUA6 226 aa24.73■■□□□ 1.55
R3HDM4-204ENST00000589428 TRIM17Q9Y577 477 aa24.73■■□□□ 1.55
R3HDM4-204ENST00000589428 FDX1P10109 184 aa24.72■■□□□ 1.55
R3HDM4-204ENST00000589428 CCDC83Q8IWF9 413 aa24.72■■□□□ 1.55
R3HDM4-204ENST00000589428 ZNF654Q8IZM8 581 aa24.72■■□□□ 1.55
R3HDM4-204ENST00000589428 SPATC1LQ9H0A9 340 aa24.72■■□□□ 1.55
R3HDM4-204ENST00000589428 SLKQ9H2G2 1235 aaPredicted RBP24.72■■□□□ 1.55
R3HDM4-204ENST00000589428 CWC22Q9HCG8 908 aaKnown RBP24.72■■□□□ 1.55
R3HDM4-204ENST00000589428 ZSWIM8A7E2V4 1837 aa24.72■■□□□ 1.55
R3HDM4-204ENST00000589428 TNPO2O14787 897 aaKnown RBP24.72■■□□□ 1.55
R3HDM4-204ENST00000589428 GNRH1P01148 92 aa24.72■■□□□ 1.55
R3HDM4-204ENST00000589428 SCRN1Q12765 414 aa24.72■■□□□ 1.55
R3HDM4-204ENST00000589428 Q3C1V9 767 aa24.72■■□□□ 1.55
R3HDM4-204ENST00000589428 TTBK2Q6IQ55 1244 aa24.72■■□□□ 1.55
R3HDM4-204ENST00000589428 MICU3Q86XE3 530 aa24.72■■□□□ 1.55
R3HDM4-204ENST00000589428 TRIM47Q96LD4 638 aa24.72■■□□□ 1.55
R3HDM4-204ENST00000589428 FOXD4L1Q9NU39 408 aa24.72■■□□□ 1.55
R3HDM4-204ENST00000589428 ZBTB43O43298 467 aa24.71■■□□□ 1.55
R3HDM4-204ENST00000589428 DDAH1O94760 285 aa24.71■■□□□ 1.55
R3HDM4-204ENST00000589428 HSP90AA1P07900 732 aaKnown RBP24.71■■□□□ 1.55
R3HDM4-204ENST00000589428 GOLGA8HP0CJ92 632 aa24.71■■□□□ 1.55
R3HDM4-204ENST00000589428 RXRAP19793 462 aa24.71■■□□□ 1.55
R3HDM4-204ENST00000589428 MAPK4P31152 587 aa24.71■■□□□ 1.55
R3HDM4-204ENST00000589428 TMEM132BQ14DG7 1078 aa24.71■■□□□ 1.55
R3HDM4-204ENST00000589428 SYDE2Q5VT97 1194 aa24.71■■□□□ 1.55
R3HDM4-204ENST00000589428 BTNL9Q6UXG8 535 aa24.71■■□□□ 1.55
R3HDM4-204ENST00000589428 OTOP1Q7RTM1 612 aa24.71■■□□□ 1.55
R3HDM4-204ENST00000589428 NCOA5Q9HCD5 579 aaKnown RBP24.71■■□□□ 1.55
R3HDM4-204ENST00000589428 PRR12Q9ULL5 1215 aa24.71■■□□□ 1.55
R3HDM4-204ENST00000589428 COL11A1P12107 1806 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms