RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 NAIPQ13075 1403 aa4.59□□□□□ -1.68
ZNF540-207ENST00000589285 PLA2R1Q13018 1463 aa4.58□□□□□ -1.68
ZNF540-207ENST00000589285 DEPDC5O75140 1603 aa4.58□□□□□ -1.68
ZNF540-207ENST00000589285 FKTNO75072 461 aa4.58□□□□□ -1.68
ZNF540-207ENST00000589285 AXDND1Q5T1B0 1012 aaPredicted RBP4.58□□□□□ -1.68
ZNF540-207ENST00000589285 HNRNPLLQ8WVV9 542 aaKnown RBP4.58□□□□□ -1.68
ZNF540-207ENST00000589285 UBE2FQ969M7 185 aa4.58□□□□□ -1.68
ZNF540-207ENST00000589285 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.58□□□□□ -1.68
ZNF540-207ENST00000589285 DHX57Q6P158 1386 aaKnown RBP4.58□□□□□ -1.68
ZNF540-207ENST00000589285 ZFYVE16Q7Z3T8 1539 aa4.58□□□□□ -1.68
ZNF540-207ENST00000589285 CDC42BPAQ5VT25 1732 aa4.58□□□□□ -1.68
ZNF540-207ENST00000589285 SHOXO15266 292 aa4.58□□□□□ -1.68
ZNF540-207ENST00000589285 SAFB2Q14151 953 aaKnown RBP eCLIP4.58□□□□□ -1.68
ZNF540-207ENST00000589285 LARP1BQ659C4 914 aaKnown RBP4.58□□□□□ -1.68
ZNF540-207ENST00000589285 ARHGAP27Q6ZUM4 889 aa4.58□□□□□ -1.68
ZNF540-207ENST00000589285 ADGBQ8N7X0 1667 aa4.58□□□□□ -1.68
ZNF540-207ENST00000589285 TMEM40Q8WWA1 233 aa4.58□□□□□ -1.68
ZNF540-207ENST00000589285 GMIPQ9P107 970 aa4.58□□□□□ -1.68
ZNF540-207ENST00000589285 EIF2AK4Q9P2K8 1649 aaKnown RBP4.58□□□□□ -1.68
ZNF540-207ENST00000589285 MAST1Q9Y2H9 1570 aa4.58□□□□□ -1.68
ZNF540-207ENST00000589285 SAMD9LQ8IVG5 1584 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 INO80Q9ULG1 1556 aaPredicted RBP4.57□□□□□ -1.68
ZNF540-207ENST00000589285 NCOA1Q15788 1441 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 FAM155AB1AL88 458 aaPredicted RBP4.57□□□□□ -1.68
ZNF540-207ENST00000589285 NME1P15531 152 aaKnown RBP4.57□□□□□ -1.68
ZNF540-207ENST00000589285 TP53INP2Q8IXH6 220 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 LRRC3Q9BY71 257 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 MKRN2Q9H000 416 aaKnown RBP4.57□□□□□ -1.68
ZNF540-207ENST00000589285 EBF1Q9UH73 591 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 CDC42BPBQ9Y5S2 1711 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 CNTLNQ9NXG0 1405 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 SYNGAP1Q96PV0 1343 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 SMAD7O15105 426 aaKnown RBP4.57□□□□□ -1.68
ZNF540-207ENST00000589285 EFEMP2O95967 443 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 TRHRP34981 398 aaPredicted RBP4.57□□□□□ -1.68
ZNF540-207ENST00000589285 ZNF165P49910 485 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 C6orf15Q6UXA7 325 aaPredicted RBP4.57□□□□□ -1.68
ZNF540-207ENST00000589285 UNC5AQ6ZN44 842 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 ABI1Q8IZP0 508 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 MFSD4AQ8N468 514 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 DTWD2Q8NBA8 298 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 KREMEN1Q96MU8 473 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 SRRTQ9BXP5 876 aaKnown RBP4.57□□□□□ -1.68
ZNF540-207ENST00000589285 OAS3Q9Y6K5 1087 aaKnown RBP4.57□□□□□ -1.68
ZNF540-207ENST00000589285 SYNMO15061 1565 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 TBX1O43435 398 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 SDHBP21912 280 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 GTF2F1P35269 517 aaKnown RBP eCLIP4.57□□□□□ -1.68
ZNF540-207ENST00000589285 ERVFC1P60507 584 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 RALGPS1Q5JS13 557 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 TMEM201Q5SNT2 666 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 SFRP5Q5T4F7 317 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 EHMT1Q9H9B1 1298 aa4.57□□□□□ -1.68
ZNF540-207ENST00000589285 MADDQ8WXG6 1647 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 KDM5DQ9BY66 1539 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 CCDC141Q6ZP82 1450 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 MBD5Q9P267 1494 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 MIA2Q96PC5 1412 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 DNAJC25-GNG10A0A024R161 153 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 FGRP09769 529 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 SLC6A19Q695T7 634 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 CRTC3Q6UUV7 619 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 CCDC84Q86UT8 332 aaPredicted RBP4.56□□□□□ -1.68
ZNF540-207ENST00000589285 APEX2Q9UBZ4 518 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 RNF112Q9ULX5 631 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 MAP3K1Q13233 1512 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 TONSLQ96HA7 1378 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 CBFA2T2O43439 604 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 CYP27C1Q4G0S4 372 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 MRM1Q6IN84 353 aaKnown RBP4.56□□□□□ -1.68
ZNF540-207ENST00000589285 BCL7CQ8WUZ0 217 aaPredicted RBP4.56□□□□□ -1.68
ZNF540-207ENST00000589285 CCDC74BQ96LY2 380 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 C19orf44Q9H6X5 657 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 CNNM2Q9H8M5 875 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 ST14Q9Y5Y6 855 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 STRCQ7RTU9 1775 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 ATP10AO60312 1499 aa4.56□□□□□ -1.68
ZNF540-207ENST00000589285 DIP2CQ9Y2E4 1556 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 ABCC1P33527 1531 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 SSBP05455 408 aaKnown RBP eCLIP4.55□□□□□ -1.68
ZNF540-207ENST00000589285 EPHX1P07099 455 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 SOX9P48436 509 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 YARSP54577 528 aaKnown RBP4.55□□□□□ -1.68
ZNF540-207ENST00000589285 NETO1Q8TDF5 533 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 PPP1R14AQ96A00 147 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 PAK6Q9NQU5 681 aaPredicted RBP4.55□□□□□ -1.68
ZNF540-207ENST00000589285 GFOD1Q9NXC2 390 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 CEP131Q9UPN4 1083 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 RIMS1Q86UR5 1692 aaKnown RBP4.55□□□□□ -1.68
ZNF540-207ENST00000589285 SIGLEC1Q9BZZ2 1709 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 A0A1W2PQH9 124 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 EIF6P56537 245 aaKnown RBP4.55□□□□□ -1.68
ZNF540-207ENST00000589285 PPP2R5DQ14738 602 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 MFSD2AQ8NA29 543 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 TANGO6Q9C0B7 1094 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 PRDM14Q9GZV8 571 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 DUSP15Q9H1R2 295 aaPredicted RBP4.55□□□□□ -1.68
ZNF540-207ENST00000589285 STK26Q9P289 416 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 CAPN6Q9Y6Q1 641 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 RNF17Q9BXT8 1623 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms