RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 TTF2Q9UNY4 1162 aaKnown RBP8.09□□□□□ -1.11
SPIDR-228ENST00000588781 MYH2Q9UKX2 1941 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 ESYT2A0FGR8 921 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 PSMA7O14818 248 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 FOXN1O15353 648 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 SLC26A4O43511 780 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 URI1O94763 535 aaPredicted RBP8.08□□□□□ -1.12
SPIDR-228ENST00000588781 ZBTB7AO95365 584 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 RPN1P04843 607 aaKnown RBP8.08□□□□□ -1.12
SPIDR-228ENST00000588781 PARP1P09874 1014 aaKnown RBP8.08□□□□□ -1.12
SPIDR-228ENST00000588781 EEF1GP26641 437 aaKnown RBP8.08□□□□□ -1.12
SPIDR-228ENST00000588781 MCM7P33993 719 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 GRIN1Q05586 938 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 FMR1Q06787 632 aaKnown RBP eCLIP8.08□□□□□ -1.12
SPIDR-228ENST00000588781 E2F4Q16254 413 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 CCDC93Q567U6 631 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 KLHL10Q6JEL2 608 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 PPP1R18Q6NYC8 613 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 REXO1L1PQ8IX06 675 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 CEP112Q8N8E3 955 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 NEDD1Q8NHV4 660 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 ARHGEF1Q92888 912 aaKnown RBP8.08□□□□□ -1.12
SPIDR-228ENST00000588781 FAM163AQ96GL9 167 aaPredicted RBP8.08□□□□□ -1.12
SPIDR-228ENST00000588781 EPSTI1Q96J88 318 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 NUP58Q9BVL2 599 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 GLT8D2Q9H1C3 349 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 THAP9Q9H5L6 903 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 DISC1Q9NRI5 854 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 BARHL2Q9NY43 387 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 ADD3Q9UEY8 706 aaKnown RBP8.08□□□□□ -1.12
SPIDR-228ENST00000588781 SRP68Q9UHB9 627 aaKnown RBP8.08□□□□□ -1.12
SPIDR-228ENST00000588781 DDX41Q9UJV9 622 aaKnown RBP8.08□□□□□ -1.12
SPIDR-228ENST00000588781 CTNND2Q9UQB3 1225 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 BTAF1O14981 1849 aa8.08□□□□□ -1.12
SPIDR-228ENST00000588781 BAZ2AQ9UIF9 1905 aaKnown RBP8.07□□□□□ -1.12
SPIDR-228ENST00000588781 MYO3BQ8WXR4 1341 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 IRS2Q9Y4H2 1338 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 NAV1Q8NEY1 1877 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 GPR75-ASB3A0A0A6YYF3 556 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 PALM3A6NDB9 673 aaPredicted RBP8.07□□□□□ -1.12
SPIDR-228ENST00000588781 LRRC10BA6NIK2 292 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 PPP1R3GB7ZBB8 358 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 TMEM232C9JQI7 657 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 UBE2Q2LH0YL09 131 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 N4BP3O15049 544 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 MFAP3LO75121 409 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 USP17L8P0C7I0 530 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 PRKCSHP14314 528 aaPredicted RBP8.07□□□□□ -1.12
SPIDR-228ENST00000588781 IL1R1P14778 569 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 TM4SF1P30408 202 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 NAPAP54920 295 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 GNG11P61952 73 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 NONOQ15233 471 aaKnown RBP eCLIP8.07□□□□□ -1.12
SPIDR-228ENST00000588781 NPY5RQ15761 445 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 TMEM266Q2M3C6 531 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 ASPRV1Q53RT3 343 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 RCSD1Q6JBY9 416 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 PDXDC2PQ6P474 469 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 TMCO3Q6UWJ1 677 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 CYP26C1Q6V0L0 522 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 C16orf86Q6ZW13 317 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 HEATR3Q7Z4Q2 680 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 TEX11Q8IYF3 940 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 TRMT44Q8IYL2 757 aaKnown RBP8.07□□□□□ -1.12
SPIDR-228ENST00000588781 TXLNBQ8N3L3 684 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 GPR161Q8N6U8 529 aaKnown RBP8.07□□□□□ -1.12
SPIDR-228ENST00000588781 TC2NQ8N9U0 490 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 RETREG2Q8NC44 543 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 ZNF384Q8TF68 577 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 NELFBQ8WX92 580 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 TSC1Q92574 1164 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 GOLGA1Q92805 767 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 CALML4Q96GE6 196 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 DHTKD1Q96HY7 919 aaPredicted RBP8.07□□□□□ -1.12
SPIDR-228ENST00000588781 EYA3Q99504 573 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 TMX4Q9H1E5 349 aaPredicted RBP8.07□□□□□ -1.12
SPIDR-228ENST00000588781 SAMSN1Q9NSI8 373 aaKnown RBP8.07□□□□□ -1.12
SPIDR-228ENST00000588781 ZNHIT6Q9NWK9 470 aaKnown RBP8.07□□□□□ -1.12
SPIDR-228ENST00000588781 SWAP70Q9UH65 585 aa8.07□□□□□ -1.12
SPIDR-228ENST00000588781 MKRN1Q9UHC7 482 aaKnown RBP8.07□□□□□ -1.12
SPIDR-228ENST00000588781 ATF5Q9Y2D1 282 aaPredicted RBP8.07□□□□□ -1.12
SPIDR-228ENST00000588781 C10orf71Q711Q0 1435 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 A0A1W2PQC6 194 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 FAM205CA6NFA0 338 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 KCNJ18B7U540 433 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 KLRF2D3W0D1 207 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 STXBP3O00186 592 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 UFL1O94874 794 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 IPO7O95373 1038 aaKnown RBP8.06□□□□□ -1.12
SPIDR-228ENST00000588781 OR52Z1P0C646 297 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 CYP2D6P10635 497 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 FECHP22830 423 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 PBX1P40424 430 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 BTDP43251 543 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 COPB1P53618 953 aaKnown RBP8.06□□□□□ -1.12
SPIDR-228ENST00000588781 KCNJ12Q14500 433 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 ELF2Q15723 593 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 ZNF827Q17R98 1081 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 ARHGAP29Q52LW3 1261 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 SLC27A3Q5K4L6 730 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms