RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 CCDC17Q96LX7 622 aa16.79■□□□□ 0.28
CCDC43-203ENST00000588210 CABP5Q9NP86 173 aa16.79■□□□□ 0.28
CCDC43-203ENST00000588210 POLR3EQ9NVU0 708 aa16.79■□□□□ 0.28
CCDC43-203ENST00000588210 ZBTB21Q9ULJ3 1066 aa16.79■□□□□ 0.28
CCDC43-203ENST00000588210 ATAD5Q96QE3 1844 aa16.78■□□□□ 0.28
CCDC43-203ENST00000588210 PCNTO95613 3336 aa16.78■□□□□ 0.28
CCDC43-203ENST00000588210 GOLGA8BA8MQT2 603 aa16.78■□□□□ 0.28
CCDC43-203ENST00000588210 USP17L5A8MUK1 530 aa16.78■□□□□ 0.28
CCDC43-203ENST00000588210 TM4SF4P48230 202 aa16.78■□□□□ 0.28
CCDC43-203ENST00000588210 BRAPQ7Z569 592 aa16.78■□□□□ 0.28
CCDC43-203ENST00000588210 LINC00301Q8NCQ3 95 aa16.78■□□□□ 0.28
CCDC43-203ENST00000588210 NCOA7Q8NI08 942 aa16.78■□□□□ 0.28
CCDC43-203ENST00000588210 KCNG4Q8TDN1 519 aa16.78■□□□□ 0.28
CCDC43-203ENST00000588210 C8orf76Q96K31 380 aa16.78■□□□□ 0.28
CCDC43-203ENST00000588210 GPHNQ9NQX3 736 aaPredicted RBP16.78■□□□□ 0.28
CCDC43-203ENST00000588210 ANAPC4Q9UJX5 808 aa16.78■□□□□ 0.28
CCDC43-203ENST00000588210 HPS5Q9UPZ3 1129 aa16.78■□□□□ 0.28
CCDC43-203ENST00000588210 KCNH4Q9UQ05 1017 aa16.78■□□□□ 0.28
CCDC43-203ENST00000588210 AFG3L2Q9Y4W6 797 aa16.78■□□□□ 0.28
CCDC43-203ENST00000588210 KLF18A0A0U1RQI7 1052 aa16.77■□□□□ 0.28
CCDC43-203ENST00000588210 SMTNL1A8MU46 457 aa16.77■□□□□ 0.28
CCDC43-203ENST00000588210 BECN2A8MW95 431 aa16.77■□□□□ 0.28
CCDC43-203ENST00000588210 CXCL11O14625 94 aa16.77■□□□□ 0.28
CCDC43-203ENST00000588210 GH2P01242 217 aa16.77■□□□□ 0.28
CCDC43-203ENST00000588210 ANTXR2P58335 489 aa16.77■□□□□ 0.28
CCDC43-203ENST00000588210 HAND2P61296 217 aa16.77■□□□□ 0.28
CCDC43-203ENST00000588210 JAG1P78504 1218 aa16.77■□□□□ 0.28
CCDC43-203ENST00000588210 PDE4BQ07343 736 aa16.77■□□□□ 0.28
CCDC43-203ENST00000588210 SNAPC2Q13487 334 aa16.77■□□□□ 0.28
CCDC43-203ENST00000588210 ANKRD7Q92527 254 aa16.77■□□□□ 0.28
CCDC43-203ENST00000588210 MS4A4AQ96JQ5 239 aa16.77■□□□□ 0.28
CCDC43-203ENST00000588210 NAT10Q9H0A0 1025 aaKnown RBP16.77■□□□□ 0.28
CCDC43-203ENST00000588210 MKNK2Q9HBH9 465 aa16.77■□□□□ 0.28
CCDC43-203ENST00000588210 AS3MTQ9HBK9 375 aa16.77■□□□□ 0.28
CCDC43-203ENST00000588210 TESPA1A2RU30 521 aaPredicted RBP16.77■□□□□ 0.27
CCDC43-203ENST00000588210 LRRC8AQ8IWT6 810 aa16.77■□□□□ 0.27
CCDC43-203ENST00000588210 FBXO18Q8NFZ0 1043 aa16.77■□□□□ 0.27
CCDC43-203ENST00000588210 ZMYND15Q9H091 742 aa16.77■□□□□ 0.27
CCDC43-203ENST00000588210 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.77■□□□□ 0.27
CCDC43-203ENST00000588210 MYH8P13535 1937 aa16.76■□□□□ 0.27
CCDC43-203ENST00000588210 PPFIA3O75145 1194 aa16.76■□□□□ 0.27
CCDC43-203ENST00000588210 STK38Q15208 465 aa16.76■□□□□ 0.27
CCDC43-203ENST00000588210 RALYLQ86SE5 291 aaKnown RBP16.76■□□□□ 0.27
CCDC43-203ENST00000588210 C16orf45Q96MC5 204 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-203ENST00000588210 ORC3Q9UBD5 711 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-203ENST00000588210 NEDD4P46934 1319 aa16.76■□□□□ 0.27
CCDC43-203ENST00000588210 CETPP11597 493 aa16.76■□□□□ 0.27
CCDC43-203ENST00000588210 SYCP1Q15431 976 aa16.76■□□□□ 0.27
CCDC43-203ENST00000588210 SHROOM1Q2M3G4 852 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-203ENST00000588210 MYSM1Q5VVJ2 828 aa16.76■□□□□ 0.27
CCDC43-203ENST00000588210 TMEM179Q6ZVK1 233 aa16.76■□□□□ 0.27
CCDC43-203ENST00000588210 ZNF444Q8N0Y2 327 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-203ENST00000588210 STK11IPQ8N1F8 1099 aa16.76■□□□□ 0.27
CCDC43-203ENST00000588210 ZNF280CQ8ND82 737 aa16.76■□□□□ 0.27
CCDC43-203ENST00000588210 BPIFA3Q9BQP9 254 aa16.76■□□□□ 0.27
CCDC43-203ENST00000588210 WDR18Q9BV38 432 aa16.76■□□□□ 0.27
CCDC43-203ENST00000588210 WBP1LQ9NX94 342 aa16.76■□□□□ 0.27
CCDC43-203ENST00000588210 PHIPQ8WWQ0 1821 aa16.75■□□□□ 0.27
CCDC43-203ENST00000588210 MPHOSPH10O00566 681 aaKnown RBP16.75■□□□□ 0.27
CCDC43-203ENST00000588210 ZNF213O14771 459 aa16.75■□□□□ 0.27
CCDC43-203ENST00000588210 TNNT1P13805 278 aa16.75■□□□□ 0.27
CCDC43-203ENST00000588210 CCDC84Q86UT8 332 aaPredicted RBP16.75■□□□□ 0.27
CCDC43-203ENST00000588210 BEGAINQ9BUH8 593 aa16.75■□□□□ 0.27
CCDC43-203ENST00000588210 PAXBP1Q9Y5B6 917 aa16.75■□□□□ 0.27
CCDC43-203ENST00000588210 CLIC4Q9Y696 253 aa16.75■□□□□ 0.27
CCDC43-203ENST00000588210 CCL15-CCL14A0A0B4J2E2 113 aa16.74■□□□□ 0.27
CCDC43-203ENST00000588210 AKR1B1P15121 316 aa16.74■□□□□ 0.27
CCDC43-203ENST00000588210 RASA1P20936 1047 aa16.74■□□□□ 0.27
CCDC43-203ENST00000588210 NDUFA8P51970 172 aa16.74■□□□□ 0.27
CCDC43-203ENST00000588210 CTDSPL2Q05D32 466 aa16.74■□□□□ 0.27
CCDC43-203ENST00000588210 SPP2Q13103 211 aa16.74■□□□□ 0.27
CCDC43-203ENST00000588210 CCL15Q16663 113 aa16.74■□□□□ 0.27
CCDC43-203ENST00000588210 AOPEPQ8N6M6 819 aa16.74■□□□□ 0.27
CCDC43-203ENST00000588210 A0A1B0GVL5 298 aa16.74■□□□□ 0.27
CCDC43-203ENST00000588210 TRIM75PA6NK02 468 aa16.74■□□□□ 0.27
CCDC43-203ENST00000588210 SPTLC2O15270 562 aa16.74■□□□□ 0.27
CCDC43-203ENST00000588210 FGRP09769 529 aa16.74■□□□□ 0.27
CCDC43-203ENST00000588210 PCP11498 1178 aaKnown RBP16.74■□□□□ 0.27
CCDC43-203ENST00000588210 GUCY1A2P33402 732 aa16.74■□□□□ 0.27
CCDC43-203ENST00000588210 SF3A1Q15459 793 aaKnown RBP16.74■□□□□ 0.27
CCDC43-203ENST00000588210 OTUD7BQ6GQQ9 843 aa16.74■□□□□ 0.27
CCDC43-203ENST00000588210 SMAP1Q8IYB5 467 aaPredicted RBP16.74■□□□□ 0.27
CCDC43-203ENST00000588210 A0A0G2JLL6 359 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-203ENST00000588210 CPLX1O14810 134 aa16.73■□□□□ 0.27
CCDC43-203ENST00000588210 SEPT2Q15019 361 aa16.73■□□□□ 0.27
CCDC43-203ENST00000588210 TPD52L1Q16890 204 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-203ENST00000588210 PRRT2Q7Z6L0 340 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-203ENST00000588210 IFNL1Q8IU54 200 aa16.73■□□□□ 0.27
CCDC43-203ENST00000588210 BRI3BPQ8WY22 251 aa16.73■□□□□ 0.27
CCDC43-203ENST00000588210 SDF4Q9BRK5 362 aa16.73■□□□□ 0.27
CCDC43-203ENST00000588210 KIAA1468Q9P260 1216 aa16.73■□□□□ 0.27
CCDC43-203ENST00000588210 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.73■□□□□ 0.27
CCDC43-203ENST00000588210 A0A087WWV3 80 aa16.73■□□□□ 0.27
CCDC43-203ENST00000588210 CA12O43570 354 aa16.73■□□□□ 0.27
CCDC43-203ENST00000588210 PRDM1O75626 825 aa16.73■□□□□ 0.27
CCDC43-203ENST00000588210 ALDH1A1P00352 501 aa16.73■□□□□ 0.27
CCDC43-203ENST00000588210 CCZ1BP86790 482 aa16.73■□□□□ 0.27
CCDC43-203ENST00000588210 CCZ1P86791 482 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-203ENST00000588210 FASTKD5Q7L8L6 764 aaKnown RBP16.73■□□□□ 0.27
CCDC43-203ENST00000588210 PDCL2Q8N4E4 241 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms