RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 SMC3Q9UQE7 1217 aa16.39■□□□□ 0.21
CCDC130-208ENST00000588071 LOC285556D6RIA3 1793 aa16.38■□□□□ 0.21
CCDC130-208ENST00000588071 PLA2G6O60733 806 aa16.38■□□□□ 0.21
CCDC130-208ENST00000588071 PPFIA3O75145 1194 aa16.38■□□□□ 0.21
CCDC130-208ENST00000588071 IFNAR1P17181 557 aa16.38■□□□□ 0.21
CCDC130-208ENST00000588071 OSBPP22059 807 aa16.38■□□□□ 0.21
CCDC130-208ENST00000588071 COG2Q14746 738 aa16.38■□□□□ 0.21
CCDC130-208ENST00000588071 NTRK3Q16288 839 aa16.38■□□□□ 0.21
CCDC130-208ENST00000588071 SYDE2Q5VT97 1194 aa16.38■□□□□ 0.21
CCDC130-208ENST00000588071 CYP4F22Q6NT55 531 aa16.38■□□□□ 0.21
CCDC130-208ENST00000588071 BTNL9Q6UXG8 535 aa16.38■□□□□ 0.21
CCDC130-208ENST00000588071 NBPF11Q86T75 865 aa16.38■□□□□ 0.21
CCDC130-208ENST00000588071 PIBF1Q8WXW3 757 aa16.38■□□□□ 0.21
CCDC130-208ENST00000588071 PHKBQ93100 1093 aa16.38■□□□□ 0.21
CCDC130-208ENST00000588071 KIFC2Q96AC6 838 aa16.38■□□□□ 0.21
CCDC130-208ENST00000588071 INTS4Q96HW7 963 aaKnown RBP16.38■□□□□ 0.21
CCDC130-208ENST00000588071 SLF1Q9BQI6 1058 aa16.38■□□□□ 0.21
CCDC130-208ENST00000588071 SLC26A6Q9BXS9 759 aa16.38■□□□□ 0.21
CCDC130-208ENST00000588071 AGTPBP1Q9UPW5 1226 aa16.38■□□□□ 0.21
CCDC130-208ENST00000588071 V9GY48 417 aaPredicted RBP16.38■□□□□ 0.21
CCDC130-208ENST00000588071 RASSF10A6NK89 507 aa16.37■□□□□ 0.21
CCDC130-208ENST00000588071 FAM155AB1AL88 458 aaPredicted RBP16.37■□□□□ 0.21
CCDC130-208ENST00000588071 CTDNEP1O95476 244 aa16.37■□□□□ 0.21
CCDC130-208ENST00000588071 HOXA7P31268 230 aaPredicted RBP16.37■□□□□ 0.21
CCDC130-208ENST00000588071 ADGRF4Q8IZF3 695 aa16.37■□□□□ 0.21
CCDC130-208ENST00000588071 PRPF38AQ8NAV1 312 aaKnown RBP16.37■□□□□ 0.21
CCDC130-208ENST00000588071 NSUN7Q8NE18 718 aaKnown RBP16.37■□□□□ 0.21
CCDC130-208ENST00000588071 RRP36Q96EU6 259 aaKnown RBP16.37■□□□□ 0.21
CCDC130-208ENST00000588071 DDX11Q96FC9 970 aa16.37■□□□□ 0.21
CCDC130-208ENST00000588071 IPO9Q96P70 1041 aaKnown RBP16.37■□□□□ 0.21
CCDC130-208ENST00000588071 SPZ1Q9BXG8 430 aa16.37■□□□□ 0.21
CCDC130-208ENST00000588071 RIOX1Q9H6W3 641 aa16.37■□□□□ 0.21
CCDC130-208ENST00000588071 FBXO28Q9NVF7 368 aa16.37■□□□□ 0.21
CCDC130-208ENST00000588071 HOXC10Q9NYD6 342 aa16.37■□□□□ 0.21
CCDC130-208ENST00000588071 CTDP1Q9Y5B0 961 aaPredicted RBP16.37■□□□□ 0.21
CCDC130-208ENST00000588071 PTPDC1A2A3K4 754 aa16.36■□□□□ 0.21
CCDC130-208ENST00000588071 PRPF3O43395 683 aaKnown RBP16.36■□□□□ 0.21
CCDC130-208ENST00000588071 CYTH3O43739 400 aa16.36■□□□□ 0.21
CCDC130-208ENST00000588071 JAK2O60674 1132 aa16.36■□□□□ 0.21
CCDC130-208ENST00000588071 DTNBO60941 627 aa16.36■□□□□ 0.21
CCDC130-208ENST00000588071 FMNL1O95466 1100 aaPredicted RBP16.36■□□□□ 0.21
CCDC130-208ENST00000588071 INHBEP58166 350 aa16.36■□□□□ 0.21
CCDC130-208ENST00000588071 IRX3P78415 501 aaPredicted RBP16.36■□□□□ 0.21
CCDC130-208ENST00000588071 HMGN5P82970 282 aaKnown RBP16.36■□□□□ 0.21
CCDC130-208ENST00000588071 MOGSQ13724 837 aa16.36■□□□□ 0.21
CCDC130-208ENST00000588071 FAM184AQ8NB25 1140 aa16.36■□□□□ 0.21
CCDC130-208ENST00000588071 BRI3BPQ8WY22 251 aa16.36■□□□□ 0.21
CCDC130-208ENST00000588071 RNF26Q9BY78 433 aaPredicted RBP16.36■□□□□ 0.21
CCDC130-208ENST00000588071 RBM27Q9P2N5 1060 aaKnown RBP16.36■□□□□ 0.21
CCDC130-208ENST00000588071 ORC3Q9UBD5 711 aaPredicted RBP16.36■□□□□ 0.21
CCDC130-208ENST00000588071 SEC63Q9UGP8 760 aaKnown RBP16.36■□□□□ 0.21
CCDC130-208ENST00000588071 PRR12Q9ULL5 1215 aa16.36■□□□□ 0.21
CCDC130-208ENST00000588071 PARP14Q460N5 1801 aa16.35■□□□□ 0.21
CCDC130-208ENST00000588071 BTBD19C9JJ37 291 aa16.35■□□□□ 0.21
CCDC130-208ENST00000588071 DSG3P32926 999 aa16.35■□□□□ 0.21
CCDC130-208ENST00000588071 FUT2Q10981 343 aa16.35■□□□□ 0.21
CCDC130-208ENST00000588071 SREBF2Q12772 1141 aa16.35■□□□□ 0.21
CCDC130-208ENST00000588071 OTUD7BQ6GQQ9 843 aa16.35■□□□□ 0.21
CCDC130-208ENST00000588071 GPAT2Q6NUI2 795 aa16.35■□□□□ 0.21
CCDC130-208ENST00000588071 ANKRD23Q86SG2 305 aa16.35■□□□□ 0.21
CCDC130-208ENST00000588071 HOMER1Q86YM7 354 aa16.35■□□□□ 0.21
CCDC130-208ENST00000588071 SMARCC2Q8TAQ2 1214 aa16.35■□□□□ 0.21
CCDC130-208ENST00000588071 CAPNS2Q96L46 248 aa16.35■□□□□ 0.21
CCDC130-208ENST00000588071 PIGSQ96S52 555 aa16.35■□□□□ 0.21
CCDC130-208ENST00000588071 JMJD4Q9H9V9 463 aa16.35■□□□□ 0.21
CCDC130-208ENST00000588071 PNMA3Q9UL41 463 aa16.35■□□□□ 0.21
CCDC130-208ENST00000588071 PPP1R9AQ9ULJ8 1098 aa16.35■□□□□ 0.21
CCDC130-208ENST00000588071 CNTNAP5Q8WYK1 1306 aa16.35■□□□□ 0.21
CCDC130-208ENST00000588071 hCG_1642624A0A1W2PR95 340 aa16.34■□□□□ 0.21
CCDC130-208ENST00000588071 TESPA1A2RU30 521 aaPredicted RBP16.34■□□□□ 0.21
CCDC130-208ENST00000588071 PDHXO00330 501 aa16.34■□□□□ 0.21
CCDC130-208ENST00000588071 ZBED4O75132 1171 aa16.34■□□□□ 0.21
CCDC130-208ENST00000588071 DEXIO95424 95 aa16.34■□□□□ 0.21
CCDC130-208ENST00000588071 GJB2P29033 226 aa16.34■□□□□ 0.21
CCDC130-208ENST00000588071 C1QTNF8P60827 252 aa16.34■□□□□ 0.21
CCDC130-208ENST00000588071 SNAP25P60880 206 aa16.34■□□□□ 0.21
CCDC130-208ENST00000588071 KIF23Q02241 960 aaPredicted RBP16.34■□□□□ 0.21
CCDC130-208ENST00000588071 NOGQ13253 232 aa16.34■□□□□ 0.21
CCDC130-208ENST00000588071 WASF1Q92558 559 aa16.34■□□□□ 0.21
CCDC130-208ENST00000588071 P2RX7Q99572 595 aaKnown RBP16.34■□□□□ 0.21
CCDC130-208ENST00000588071 ASCC2Q9H1I8 757 aaPredicted RBP16.34■□□□□ 0.21
CCDC130-208ENST00000588071 SLC45A1Q9Y2W3 748 aa16.34■□□□□ 0.21
CCDC130-208ENST00000588071 KIF3AQ9Y496 699 aa16.34■□□□□ 0.21
CCDC130-208ENST00000588071 COL11A1P12107 1806 aaPredicted RBP16.33■□□□□ 0.21
CCDC130-208ENST00000588071 RLFQ13129 1914 aa16.33■□□□□ 0.21
CCDC130-208ENST00000588071 PNMA6FA0A0J9YX94 578 aa16.33■□□□□ 0.2
CCDC130-208ENST00000588071 FDX1P10109 184 aa16.33■□□□□ 0.2
CCDC130-208ENST00000588071 HTRA3P83110 453 aa16.33■□□□□ 0.2
CCDC130-208ENST00000588071 CDC37Q16543 378 aaPredicted RBP16.33■□□□□ 0.2
CCDC130-208ENST00000588071 SLC35G1Q2M3R5 365 aa16.33■□□□□ 0.2
CCDC130-208ENST00000588071 PTPN18Q99952 460 aa16.33■□□□□ 0.2
CCDC130-208ENST00000588071 WDR33Q9C0J8 1336 aaKnown RBP16.33■□□□□ 0.2
CCDC130-208ENST00000588071 STK36Q9NRP7 1315 aa16.33■□□□□ 0.2
CCDC130-208ENST00000588071 ZBTB5O15062 677 aa16.32■□□□□ 0.2
CCDC130-208ENST00000588071 AOC2O75106 756 aa16.32■□□□□ 0.2
CCDC130-208ENST00000588071 FDPSP14324 419 aaKnown RBP16.32■□□□□ 0.2
CCDC130-208ENST00000588071 CCDC174Q6PII3 467 aa16.32■□□□□ 0.2
CCDC130-208ENST00000588071 MYPNQ86TC9 1320 aa16.32■□□□□ 0.2
CCDC130-208ENST00000588071 IFNL1Q8IU54 200 aa16.32■□□□□ 0.2
CCDC130-208ENST00000588071 REM2Q8IYK8 340 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms