RNA–Protein interactions for RNA: ENST00000587480.1

TMC6-208, Transcript of transmembrane channel like 6, human

Gene TMC6, Length 253 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-208	ENST00000587480	ABRA	Q8N0Z2	381 aa		27.62	■■■□□ 2.01
TMC6-208	ENST00000587480	MTA3	Q9BTC8	594 aa		27.62	■■■□□ 2.01
TMC6-208	ENST00000587480	RBBP6	Q7Z6E9	1792 aa	Known RBP	27.62	■■■□□ 2.01
TMC6-208	ENST00000587480	ADCY3	O60266	1144 aa		27.61	■■■□□ 2.01
TMC6-208	ENST00000587480	ERCC3	P19447	782 aa		27.61	■■■□□ 2.01
TMC6-208	ENST00000587480	PTPRE	P23469	700 aa		27.61	■■■□□ 2.01
TMC6-208	ENST00000587480	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	27.61	■■■□□ 2.01
TMC6-208	ENST00000587480	MB21D2	Q8IYB1	491 aa	Predicted RBP	27.61	■■■□□ 2.01
TMC6-208	ENST00000587480	TEX13B	Q9BXU2	312 aa		27.61	■■■□□ 2.01
TMC6-208	ENST00000587480	EPB41L2	O43491	1005 aa	Known RBP	27.6	■■■□□ 2.01
TMC6-208	ENST00000587480	ZBED4	O75132	1171 aa		27.6	■■■□□ 2.01
TMC6-208	ENST00000587480	HOXC6	P09630	235 aa		27.6	■■■□□ 2.01
TMC6-208	ENST00000587480	STAT3	P40763	770 aa		27.6	■■■□□ 2.01
TMC6-208	ENST00000587480	RNF20	Q5VTR2	975 aa		27.6	■■■□□ 2.01
TMC6-208	ENST00000587480	KCTD1	Q719H9	257 aa		27.6	■■■□□ 2.01
TMC6-208	ENST00000587480	TRMT44	Q8IYL2	757 aa	Known RBP	27.6	■■■□□ 2.01
TMC6-208	ENST00000587480	PNMA1	Q8ND90	353 aa		27.6	■■■□□ 2.01
TMC6-208	ENST00000587480	KIFC2	Q96AC6	838 aa		27.6	■■■□□ 2.01
TMC6-208	ENST00000587480	KAT14	Q9H8E8	782 aa		27.6	■■■□□ 2.01
TMC6-208	ENST00000587480	IVNS1ABP	Q9Y6Y0	642 aa		27.6	■■■□□ 2.01
TMC6-208	ENST00000587480	RGS2	P41220	211 aa		27.59	■■■□□ 2.01
TMC6-208	ENST00000587480	ZNF543	Q08ER8	600 aa		27.59	■■■□□ 2.01
TMC6-208	ENST00000587480	MAP2K5	Q13163	448 aa		27.59	■■■□□ 2.01
TMC6-208	ENST00000587480	TSGA10IP	Q3SY00	556 aa		27.59	■■■□□ 2.01
TMC6-208	ENST00000587480	GPATCH4	Q5T3I0	446 aa	Known RBP	27.59	■■■□□ 2.01
TMC6-208	ENST00000587480	RASGRP2	Q7LDG7	609 aa		27.59	■■■□□ 2.01
TMC6-208	ENST00000587480	SH3TC2	Q8TF17	1288 aa		27.59	■■■□□ 2.01
TMC6-208	ENST00000587480	APBA2	Q99767	749 aa		27.59	■■■□□ 2.01
TMC6-208	ENST00000587480	PLS1	Q14651	629 aa		27.58	■■■□□ 2.01
TMC6-208	ENST00000587480	CCDC96	Q2M329	555 aa		27.58	■■■□□ 2.01
TMC6-208	ENST00000587480	SAMD1	Q6SPF0	538 aa	Predicted RBP	27.58	■■■□□ 2.01
TMC6-208	ENST00000587480	CWC22	Q9HCG8	908 aa	Known RBP	27.58	■■■□□ 2.01
TMC6-208	ENST00000587480	KIAA0100	Q14667	2235 aa	Known RBP	27.57	■■■□□ 2
TMC6-208	ENST00000587480	SART3	Q15020	963 aa	Known RBP	27.57	■■■□□ 2
TMC6-208	ENST00000587480	IFIT1B	Q5T764	474 aa	Known RBP	27.57	■■■□□ 2
TMC6-208	ENST00000587480	PRR12	Q9ULL5	1215 aa		27.57	■■■□□ 2
TMC6-208	ENST00000587480	REC8	O95072	547 aa		27.56	■■■□□ 2
TMC6-208	ENST00000587480	HMGCR	P04035	888 aa		27.56	■■■□□ 2
TMC6-208	ENST00000587480	ANTXR2	P58335	489 aa		27.56	■■■□□ 2
TMC6-208	ENST00000587480	NCAPG2	Q86XI2	1143 aa		27.56	■■■□□ 2
TMC6-208	ENST00000587480	KCNB2	Q92953	911 aa		27.56	■■■□□ 2
TMC6-208	ENST00000587480	BRCA2	P51587	3418 aa		27.56	■■■□□ 2
TMC6-208	ENST00000587480	ELN	P15502	786 aa		27.55	■■■□□ 2
TMC6-208	ENST00000587480	UBXN2A	P68543	259 aa		27.55	■■■□□ 2
TMC6-208	ENST00000587480	IK	Q13123	557 aa	Predicted RBP	27.55	■■■□□ 2
TMC6-208	ENST00000587480	ASPRV1	Q53RT3	343 aa		27.55	■■■□□ 2
TMC6-208	ENST00000587480	WDR78	Q5VTH9	848 aa		27.55	■■■□□ 2
TMC6-208	ENST00000587480	SNRNP48	Q6IEG0	339 aa	Known RBP	27.55	■■■□□ 2
TMC6-208	ENST00000587480	ISY1	Q9ULR0	285 aa	Known RBP	27.55	■■■□□ 2
TMC6-208	ENST00000587480	CTDP1	Q9Y5B0	961 aa	Predicted RBP	27.55	■■■□□ 2
TMC6-208	ENST00000587480	ZNF536	O15090	1300 aa		27.54	■■■□□ 2
TMC6-208	ENST00000587480	IGHA2	P01877	340 aa		27.54	■■■□□ 2
TMC6-208	ENST00000587480	ADORA2A	P29274	412 aa		27.54	■■■□□ 2
TMC6-208	ENST00000587480	RGS19	P49795	217 aa		27.54	■■■□□ 2
TMC6-208	ENST00000587480	SYDE2	Q5VT97	1194 aa		27.54	■■■□□ 2
TMC6-208	ENST00000587480	IGDCC4	Q8TDY8	1250 aa		27.54	■■■□□ 2
TMC6-208	ENST00000587480	RANBP17	Q9H2T7	1088 aa	Known RBP	27.54	■■■□□ 2
TMC6-208	ENST00000587480	ERICH2	A1L162	156 aa		27.53	■■■□□ 2
TMC6-208	ENST00000587480	IFIT3	O14879	490 aa	Known RBP	27.53	■■■□□ 2
TMC6-208	ENST00000587480	CAPN15	O75808	1086 aa		27.53	■■■□□ 2
TMC6-208	ENST00000587480	INHA	P05111	366 aa		27.53	■■■□□ 2
TMC6-208	ENST00000587480	FCER1A	P12319	257 aa		27.53	■■■□□ 2
TMC6-208	ENST00000587480	CYP2B6	P20813	491 aa		27.53	■■■□□ 2
TMC6-208	ENST00000587480	MCM5	P33992	734 aa		27.53	■■■□□ 2
TMC6-208	ENST00000587480	TTBK2	Q6IQ55	1244 aa		27.53	■■■□□ 2
TMC6-208	ENST00000587480	TRIB2	Q92519	343 aa		27.53	■■■□□ 2
TMC6-208	ENST00000587480	MTMR7	Q9Y216	660 aa		27.53	■■■□□ 2
TMC6-208	ENST00000587480	FRMPD2	Q68DX3	1309 aa	Predicted RBP	27.52	■■■□□ 2
TMC6-208	ENST00000587480	WDR19	Q8NEZ3	1342 aa		27.52	■■■□□ 2
TMC6-208	ENST00000587480	KRT32	Q14532	448 aa		27.52	■■■□□ 2
TMC6-208	ENST00000587480	TKFC	Q3LXA3	575 aa		27.52	■■■□□ 2
TMC6-208	ENST00000587480	CHST13	Q8NET6	341 aa		27.52	■■■□□ 2
TMC6-208	ENST00000587480	TMEM87B	Q96K49	555 aa		27.52	■■■□□ 2
TMC6-208	ENST00000587480	RAVER2	Q9HCJ3	691 aa	Known RBP	27.52	■■■□□ 2
TMC6-208	ENST00000587480	FBXO40	Q9UH90	709 aa		27.52	■■■□□ 2
TMC6-208	ENST00000587480	PNMA2	Q9UL42	364 aa		27.52	■■■□□ 2
TMC6-208	ENST00000587480	ZKSCAN1	P17029	563 aa	Predicted RBP	27.51	■■□□□ 1.99
TMC6-208	ENST00000587480	WTAP	Q15007	396 aa		27.51	■■□□□ 1.99
TMC6-208	ENST00000587480	MAP3K21	Q5TCX8	1036 aa		27.51	■■□□□ 1.99
TMC6-208	ENST00000587480	GPCPD1	Q9NPB8	672 aa		27.51	■■□□□ 1.99
TMC6-208	ENST00000587480	SLC5A4	Q9NY91	659 aa		27.51	■■□□□ 1.99
TMC6-208	ENST00000587480	RIPK3	Q9Y572	518 aa		27.51	■■□□□ 1.99
TMC6-208	ENST00000587480	ZNFX1	Q9P2E3	1918 aa	Known RBP	27.5	■■□□□ 1.99
TMC6-208	ENST00000587480	HSPA4	P34932	840 aa		27.5	■■□□□ 1.99
TMC6-208	ENST00000587480	TMEM67	Q5HYA8	995 aa		27.5	■■□□□ 1.99
TMC6-208	ENST00000587480	OLFML2B	Q68BL8	750 aa		27.5	■■□□□ 1.99
TMC6-208	ENST00000587480	CPXCR1	Q8N123	301 aa		27.5	■■□□□ 1.99
TMC6-208	ENST00000587480	CHMP4C	Q96CF2	233 aa		27.5	■■□□□ 1.99
TMC6-208	ENST00000587480	MMP19	Q99542	508 aa		27.5	■■□□□ 1.99
TMC6-208	ENST00000587480	BIN2	Q9UBW5	565 aa	Predicted RBP	27.5	■■□□□ 1.99
TMC6-208	ENST00000587480	PRC1	O43663	620 aa		27.49	■■□□□ 1.99
TMC6-208	ENST00000587480	ICAM1	P05362	532 aa		27.49	■■□□□ 1.99
TMC6-208	ENST00000587480	PARP1	P09874	1014 aa	Known RBP	27.49	■■□□□ 1.99
TMC6-208	ENST00000587480	CAPN2	P17655	700 aa		27.49	■■□□□ 1.99
TMC6-208	ENST00000587480	SLC16A2	P36021	539 aa		27.49	■■□□□ 1.99
TMC6-208	ENST00000587480	MTFR1	Q15390	333 aa		27.49	■■□□□ 1.99
TMC6-208	ENST00000587480	RASEF	Q8IZ41	740 aa		27.49	■■□□□ 1.99
TMC6-208	ENST00000587480	TMTC2	Q8N394	836 aa		27.49	■■□□□ 1.99
TMC6-208	ENST00000587480	TMEM106C	Q9BVX2	250 aa		27.49	■■□□□ 1.99
TMC6-208	ENST00000587480	LY9	Q9HBG7	655 aa		27.49	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms