RNA–Protein interactions for RNA: ENST00000586709.1

LAMA3-205, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 637 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-205ENST00000586709 FAM47AQ5JRC9 791 aa11.83□□□□□ -0.52
LAMA3-205ENST00000586709 TRMT44Q8IYL2 757 aaKnown RBP11.83□□□□□ -0.52
LAMA3-205ENST00000586709 MKL1Q969V6 931 aa11.83□□□□□ -0.52
LAMA3-205ENST00000586709 RNF166Q96A37 237 aaPredicted RBP11.83□□□□□ -0.52
LAMA3-205ENST00000586709 APBA2Q99767 749 aa11.83□□□□□ -0.52
LAMA3-205ENST00000586709 MOV10L1Q9BXT6 1211 aaKnown RBP11.83□□□□□ -0.52
LAMA3-205ENST00000586709 SPATC1LQ9H0A9 340 aa11.83□□□□□ -0.52
LAMA3-205ENST00000586709 DIAPH3Q9NSV4 1193 aa11.83□□□□□ -0.52
LAMA3-205ENST00000586709 FBXO28Q9NVF7 368 aa11.83□□□□□ -0.52
LAMA3-205ENST00000586709 PPP1R9AQ9ULJ8 1098 aa11.83□□□□□ -0.52
LAMA3-205ENST00000586709 SYNPO2Q9UMS6 1093 aa11.83□□□□□ -0.52
LAMA3-205ENST00000586709 IVNS1ABPQ9Y6Y0 642 aa11.83□□□□□ -0.52
LAMA3-205ENST00000586709 MYH6P13533 1939 aa11.82□□□□□ -0.52
LAMA3-205ENST00000586709 MCM3APO60318 1980 aa11.82□□□□□ -0.52
LAMA3-205ENST00000586709 SLC15A5A6NIM6 579 aa11.82□□□□□ -0.52
LAMA3-205ENST00000586709 TSPY2A6NKD2 308 aa11.82□□□□□ -0.52
LAMA3-205ENST00000586709 ORC4O43929 436 aa11.82□□□□□ -0.52
LAMA3-205ENST00000586709 ZKSCAN1P17029 563 aaPredicted RBP11.82□□□□□ -0.52
LAMA3-205ENST00000586709 MAP2K5Q13163 448 aa11.82□□□□□ -0.52
LAMA3-205ENST00000586709 GRB14Q14449 540 aa11.82□□□□□ -0.52
LAMA3-205ENST00000586709 PLS1Q14651 629 aa11.82□□□□□ -0.52
LAMA3-205ENST00000586709 PPP4R3BQ5MIZ7 849 aa11.82□□□□□ -0.52
LAMA3-205ENST00000586709 TTC22Q5TAA0 569 aa11.82□□□□□ -0.52
LAMA3-205ENST00000586709 CWC27Q6UX04 472 aaKnown RBP11.82□□□□□ -0.52
LAMA3-205ENST00000586709 LRRC47Q8N1G4 583 aaKnown RBP11.82□□□□□ -0.52
LAMA3-205ENST00000586709 GMCL1P1Q8NEA9 526 aa11.82□□□□□ -0.52
LAMA3-205ENST00000586709 SHCBP1Q8NEM2 672 aa11.82□□□□□ -0.52
LAMA3-205ENST00000586709 U2AF1L4Q8WU68 220 aaKnown RBP11.82□□□□□ -0.52
LAMA3-205ENST00000586709 NUP88Q99567 741 aaPredicted RBP11.82□□□□□ -0.52
LAMA3-205ENST00000586709 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.82□□□□□ -0.52
LAMA3-205ENST00000586709 INCENPQ9NQS7 918 aa11.82□□□□□ -0.52
LAMA3-205ENST00000586709 PAK6Q9NQU5 681 aaPredicted RBP11.82□□□□□ -0.52
LAMA3-205ENST00000586709 ADAMTS5Q9UNA0 930 aa11.82□□□□□ -0.52
LAMA3-205ENST00000586709 SMCHD1A6NHR9 2005 aa11.82□□□□□ -0.52
LAMA3-205ENST00000586709 RANBP6O60518 1105 aaKnown RBP11.81□□□□□ -0.52
LAMA3-205ENST00000586709 SGPL1O95470 568 aa11.81□□□□□ -0.52
LAMA3-205ENST00000586709 FGRP09769 529 aa11.81□□□□□ -0.52
LAMA3-205ENST00000586709 GSPT1P15170 499 aaKnown RBP11.81□□□□□ -0.52
LAMA3-205ENST00000586709 ERCC3P19447 782 aa11.81□□□□□ -0.52
LAMA3-205ENST00000586709 TRIM32Q13049 653 aa11.81□□□□□ -0.52
LAMA3-205ENST00000586709 TMEM132BQ14DG7 1078 aa11.81□□□□□ -0.52
LAMA3-205ENST00000586709 SLF1Q9BQI6 1058 aa11.81□□□□□ -0.52
LAMA3-205ENST00000586709 MROH8Q9H579 483 aa11.81□□□□□ -0.52
LAMA3-205ENST00000586709 TACC3Q9Y6A5 838 aa11.81□□□□□ -0.52
LAMA3-205ENST00000586709 RPTORQ8N122 1335 aa11.81□□□□□ -0.52
LAMA3-205ENST00000586709 RANBP2P49792 3224 aaKnown RBP11.8□□□□□ -0.52
LAMA3-205ENST00000586709 VWA5AO00534 786 aa11.8□□□□□ -0.52
LAMA3-205ENST00000586709 STRNO43815 780 aa11.8□□□□□ -0.52
LAMA3-205ENST00000586709 SLC25A27O95847 323 aa11.8□□□□□ -0.52
LAMA3-205ENST00000586709 HOXC6P09630 235 aa11.8□□□□□ -0.52
LAMA3-205ENST00000586709 HOXB1P14653 301 aaPredicted RBP11.8□□□□□ -0.52
LAMA3-205ENST00000586709 CAPN2P17655 700 aa11.8□□□□□ -0.52
LAMA3-205ENST00000586709 HAND2P61296 217 aa11.8□□□□□ -0.52
LAMA3-205ENST00000586709 CCL14Q16627 93 aa11.8□□□□□ -0.52
LAMA3-205ENST00000586709 MAP3K21Q5TCX8 1036 aa11.8□□□□□ -0.52
LAMA3-205ENST00000586709 SLFN13Q68D06 897 aa11.8□□□□□ -0.52
LAMA3-205ENST00000586709 NCAPG2Q86XI2 1143 aa11.8□□□□□ -0.52
LAMA3-205ENST00000586709 REPS2Q8NFH8 660 aa11.8□□□□□ -0.52
LAMA3-205ENST00000586709 DEFB118Q96PH6 123 aa11.8□□□□□ -0.52
LAMA3-205ENST00000586709 HMX1Q9NP08 348 aaPredicted RBP11.8□□□□□ -0.52
LAMA3-205ENST00000586709 ZNF214Q9UL59 606 aaPredicted RBP11.8□□□□□ -0.52
LAMA3-205ENST00000586709 STX8Q9UNK0 236 aa11.8□□□□□ -0.52
LAMA3-205ENST00000586709 NMT2O60551 498 aa11.79□□□□□ -0.52
LAMA3-205ENST00000586709 PCP11498 1178 aaKnown RBP11.79□□□□□ -0.52
LAMA3-205ENST00000586709 BMP3P12645 472 aa11.79□□□□□ -0.52
LAMA3-205ENST00000586709 ADORA2AP29274 412 aa11.79□□□□□ -0.52
LAMA3-205ENST00000586709 COPB2P35606 906 aa11.79□□□□□ -0.52
LAMA3-205ENST00000586709 CACNB2Q08289 660 aaPredicted RBP11.79□□□□□ -0.52
LAMA3-205ENST00000586709 RRP12Q5JTH9 1297 aaKnown RBP11.79□□□□□ -0.52
LAMA3-205ENST00000586709 AKNAD1Q5T1N1 836 aa11.79□□□□□ -0.52
LAMA3-205ENST00000586709 PRPF38BQ5VTL8 546 aaKnown RBP11.79□□□□□ -0.52
LAMA3-205ENST00000586709 RIOX2Q8IUF8 465 aa11.79□□□□□ -0.52
LAMA3-205ENST00000586709 ABRAQ8N0Z2 381 aa11.79□□□□□ -0.52
LAMA3-205ENST00000586709 ZNF710Q8N1W2 664 aa11.79□□□□□ -0.52
LAMA3-205ENST00000586709 PRPF38AQ8NAV1 312 aaKnown RBP11.79□□□□□ -0.52
LAMA3-205ENST00000586709 STAG1Q8WVM7 1258 aa11.79□□□□□ -0.52
LAMA3-205ENST00000586709 NBPF3Q9H094 633 aa11.79□□□□□ -0.52
LAMA3-205ENST00000586709 CRISPLD2Q9H0B8 497 aa11.79□□□□□ -0.52
LAMA3-205ENST00000586709 IL17RBQ9NRM6 502 aa11.79□□□□□ -0.52
LAMA3-205ENST00000586709 TOMM22Q9NS69 142 aa11.79□□□□□ -0.52
LAMA3-205ENST00000586709 FEM1BQ9UK73 627 aa11.79□□□□□ -0.52
LAMA3-205ENST00000586709 ZNF213O14771 459 aa11.78□□□□□ -0.52
LAMA3-205ENST00000586709 FARP2O94887 1054 aaPredicted RBP11.78□□□□□ -0.52
LAMA3-205ENST00000586709 TFRCP02786 760 aaKnown RBP11.78□□□□□ -0.52
LAMA3-205ENST00000586709 HOXB3P14651 431 aaPredicted RBP11.78□□□□□ -0.52
LAMA3-205ENST00000586709 STAT3P40763 770 aa11.78□□□□□ -0.52
LAMA3-205ENST00000586709 NOVP48745 357 aa11.78□□□□□ -0.52
LAMA3-205ENST00000586709 MFSD6Q6ZSS7 791 aa11.78□□□□□ -0.52
LAMA3-205ENST00000586709 UBE2Q1Q7Z7E8 422 aa11.78□□□□□ -0.52
LAMA3-205ENST00000586709 DPP9Q86TI2 863 aa11.78□□□□□ -0.52
LAMA3-205ENST00000586709 TBC1D10CQ8IV04 446 aa11.78□□□□□ -0.52
LAMA3-205ENST00000586709 NPLOC4Q8TAT6 608 aa11.78□□□□□ -0.52
LAMA3-205ENST00000586709 KIFC2Q96AC6 838 aa11.78□□□□□ -0.52
LAMA3-205ENST00000586709 GMCL1Q96IK5 515 aa11.78□□□□□ -0.52
LAMA3-205ENST00000586709 DSCC1Q9BVC3 393 aa11.78□□□□□ -0.52
LAMA3-205ENST00000586709 TEX13BQ9BXU2 312 aa11.78□□□□□ -0.52
LAMA3-205ENST00000586709 RNF41Q9H4P4 317 aaPredicted RBP11.78□□□□□ -0.52
LAMA3-205ENST00000586709 FLRT1Q9NZU1 646 aa11.78□□□□□ -0.52
LAMA3-205ENST00000586709 RAD50Q92878 1312 aa11.78□□□□□ -0.52
LAMA3-205ENST00000586709 ZBED4O75132 1171 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms