RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 BMP8BP34820 402 aa13.32□□□□□ -0.28
ACTN4-209ENST00000586538 SLC1A4P43007 532 aa13.32□□□□□ -0.28
ACTN4-209ENST00000586538 MNX1P50219 401 aaPredicted RBP13.32□□□□□ -0.28
ACTN4-209ENST00000586538 IKQ13123 557 aaPredicted RBP13.32□□□□□ -0.28
ACTN4-209ENST00000586538 ALX1Q15699 326 aa13.32□□□□□ -0.28
ACTN4-209ENST00000586538 SLFN13Q68D06 897 aa13.32□□□□□ -0.28
ACTN4-209ENST00000586538 SMC5Q8IY18 1101 aa13.32□□□□□ -0.28
ACTN4-209ENST00000586538 CHST13Q8NET6 341 aa13.32□□□□□ -0.28
ACTN4-209ENST00000586538 KIFC2Q96AC6 838 aa13.32□□□□□ -0.28
ACTN4-209ENST00000586538 GMCL1Q96IK5 515 aa13.32□□□□□ -0.28
ACTN4-209ENST00000586538 TINF2Q9BSI4 451 aa13.32□□□□□ -0.28
ACTN4-209ENST00000586538 STX8Q9UNK0 236 aa13.32□□□□□ -0.28
ACTN4-209ENST00000586538 PFASO15067 1338 aa13.32□□□□□ -0.28
ACTN4-209ENST00000586538 RANBP6O60518 1105 aaKnown RBP13.31□□□□□ -0.28
ACTN4-209ENST00000586538 AKR1A1P14550 325 aa13.31□□□□□ -0.28
ACTN4-209ENST00000586538 TKFCQ3LXA3 575 aa13.31□□□□□ -0.28
ACTN4-209ENST00000586538 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.31□□□□□ -0.28
ACTN4-209ENST00000586538 CHD1LQ86WJ1 897 aa13.31□□□□□ -0.28
ACTN4-209ENST00000586538 LRRC47Q8N1G4 583 aaKnown RBP13.31□□□□□ -0.28
ACTN4-209ENST00000586538 REPS2Q8NFH8 660 aa13.31□□□□□ -0.28
ACTN4-209ENST00000586538 LNPKQ9C0E8 428 aa13.31□□□□□ -0.28
ACTN4-209ENST00000586538 SENP6Q9GZR1 1112 aaPredicted RBP13.31□□□□□ -0.28
ACTN4-209ENST00000586538 RNF41Q9H4P4 317 aaPredicted RBP13.31□□□□□ -0.28
ACTN4-209ENST00000586538 SLC38A10Q9HBR0 1119 aa13.31□□□□□ -0.28
ACTN4-209ENST00000586538 TOMM22Q9NS69 142 aa13.31□□□□□ -0.28
ACTN4-209ENST00000586538 PNMA2Q9UL42 364 aa13.31□□□□□ -0.28
ACTN4-209ENST00000586538 SYNGAP1Q96PV0 1343 aa13.31□□□□□ -0.28
ACTN4-209ENST00000586538 ALPK3Q96L96 1907 aa13.31□□□□□ -0.28
ACTN4-209ENST00000586538 ORC4O43929 436 aa13.3□□□□□ -0.28
ACTN4-209ENST00000586538 PLA2G6O60733 806 aa13.3□□□□□ -0.28
ACTN4-209ENST00000586538 ZNF792Q3KQV3 632 aa13.3□□□□□ -0.28
ACTN4-209ENST00000586538 FAM47AQ5JRC9 791 aa13.3□□□□□ -0.28
ACTN4-209ENST00000586538 ZNF467Q7Z7K2 595 aaPredicted RBP13.3□□□□□ -0.28
ACTN4-209ENST00000586538 RNF180Q86T96 592 aa13.3□□□□□ -0.28
ACTN4-209ENST00000586538 CPXCR1Q8N123 301 aa13.3□□□□□ -0.28
ACTN4-209ENST00000586538 ANKRD35Q8N283 1001 aa13.3□□□□□ -0.28
ACTN4-209ENST00000586538 RILPL2Q969X0 211 aa13.3□□□□□ -0.28
ACTN4-209ENST00000586538 NUP88Q99567 741 aaPredicted RBP13.3□□□□□ -0.28
ACTN4-209ENST00000586538 PRO3102Q9H379 93 aa13.3□□□□□ -0.28
ACTN4-209ENST00000586538 OSBPL3Q9H4L5 887 aa13.3□□□□□ -0.28
ACTN4-209ENST00000586538 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.3□□□□□ -0.28
ACTN4-209ENST00000586538 CCDC171Q6TFL3 1326 aa13.3□□□□□ -0.28
ACTN4-209ENST00000586538 PLXNA1Q9UIW2 1896 aa13.29□□□□□ -0.28
ACTN4-209ENST00000586538 TMEM232C9JQI7 657 aa13.29□□□□□ -0.28
ACTN4-209ENST00000586538 CCDC178Q5BJE1 867 aa13.29□□□□□ -0.28
ACTN4-209ENST00000586538 RCSD1Q6JBY9 416 aa13.29□□□□□ -0.28
ACTN4-209ENST00000586538 CCDC129Q6ZRS4 1044 aa13.29□□□□□ -0.28
ACTN4-209ENST00000586538 STAG1Q8WVM7 1258 aa13.29□□□□□ -0.28
ACTN4-209ENST00000586538 GDF15Q99988 308 aa13.29□□□□□ -0.28
ACTN4-209ENST00000586538 LBHD1Q9BQE6 289 aaPredicted RBP13.29□□□□□ -0.28
ACTN4-209ENST00000586538 ACAD9Q9H845 621 aa13.29□□□□□ -0.28
ACTN4-209ENST00000586538 ZMYND8Q9ULU4 1186 aaPredicted RBP13.29□□□□□ -0.28
ACTN4-209ENST00000586538 ZNFX1Q9P2E3 1918 aaKnown RBP13.29□□□□□ -0.28
ACTN4-209ENST00000586538 PGK2P07205 417 aa13.28□□□□□ -0.28
ACTN4-209ENST00000586538 FGRP09769 529 aa13.28□□□□□ -0.28
ACTN4-209ENST00000586538 NUCB1Q02818 461 aa13.28□□□□□ -0.28
ACTN4-209ENST00000586538 CTDSPL2Q05D32 466 aa13.28□□□□□ -0.28
ACTN4-209ENST00000586538 B4GALNT3Q6L9W6 998 aa13.28□□□□□ -0.28
ACTN4-209ENST00000586538 MAMDC4Q6UXC1 1216 aa13.28□□□□□ -0.28
ACTN4-209ENST00000586538 MFSD6Q6ZSS7 791 aa13.28□□□□□ -0.28
ACTN4-209ENST00000586538 TRPV1Q8NER1 839 aa13.28□□□□□ -0.28
ACTN4-209ENST00000586538 DCAF4Q8WV16 495 aa13.28□□□□□ -0.28
ACTN4-209ENST00000586538 SPC25Q9HBM1 224 aa13.28□□□□□ -0.28
ACTN4-209ENST00000586538 RAVER2Q9HCJ3 691 aaKnown RBP13.28□□□□□ -0.28
ACTN4-209ENST00000586538 XPNPEP3Q9NQH7 507 aa13.28□□□□□ -0.28
ACTN4-209ENST00000586538 DIAPH3Q9NSV4 1193 aa13.28□□□□□ -0.28
ACTN4-209ENST00000586538 TCP11L1Q9NUJ3 509 aa13.28□□□□□ -0.28
ACTN4-209ENST00000586538 FAM184BQ9ULE4 1060 aa13.28□□□□□ -0.28
ACTN4-209ENST00000586538 TRIOBPQ9H2D6 2365 aa13.27□□□□□ -0.29
ACTN4-209ENST00000586538 A0A0D9SFI3 127 aa13.27□□□□□ -0.29
ACTN4-209ENST00000586538 FGAP02671 866 aa13.27□□□□□ -0.29
ACTN4-209ENST00000586538 MYCNP04198 464 aaPredicted RBP13.27□□□□□ -0.29
ACTN4-209ENST00000586538 HSPD1P10809 573 aaKnown RBP13.27□□□□□ -0.29
ACTN4-209ENST00000586538 SLC4A3P48751 1232 aa13.27□□□□□ -0.29
ACTN4-209ENST00000586538 LRRC26Q2I0M4 334 aa13.27□□□□□ -0.29
ACTN4-209ENST00000586538 GJC2Q5T442 439 aaPredicted RBP13.27□□□□□ -0.29
ACTN4-209ENST00000586538 C1orf53Q5VUE5 145 aa13.27□□□□□ -0.29
ACTN4-209ENST00000586538 GPR153Q6NV75 609 aa13.27□□□□□ -0.29
ACTN4-209ENST00000586538 TDHQ8IZJ6 230 aa13.27□□□□□ -0.29
ACTN4-209ENST00000586538 ESR2Q92731 530 aa13.27□□□□□ -0.29
ACTN4-209ENST00000586538 FAM227BQ96M60 508 aa13.27□□□□□ -0.29
ACTN4-209ENST00000586538 TTC14Q96N46 770 aa13.27□□□□□ -0.29
ACTN4-209ENST00000586538 UBE2OQ9C0C9 1292 aaKnown RBP13.27□□□□□ -0.29
ACTN4-209ENST00000586538 ABHD16BQ9H3Z7 469 aa13.27□□□□□ -0.29
ACTN4-209ENST00000586538 DNAJC25-GNG10A0A024R161 153 aa13.26□□□□□ -0.29
ACTN4-209ENST00000586538 ASB14A6NK59 587 aa13.26□□□□□ -0.29
ACTN4-209ENST00000586538 TOP1P11387 765 aaKnown RBP13.26□□□□□ -0.29
ACTN4-209ENST00000586538 SYN1P17600 705 aa13.26□□□□□ -0.29
ACTN4-209ENST00000586538 SDSP20132 328 aa13.26□□□□□ -0.29
ACTN4-209ENST00000586538 MCCP23508 829 aa13.26□□□□□ -0.29
ACTN4-209ENST00000586538 MAGEA10P43363 369 aaPredicted RBP13.26□□□□□ -0.29
ACTN4-209ENST00000586538 NMIQ13287 307 aaPredicted RBP13.26□□□□□ -0.29
ACTN4-209ENST00000586538 LRRC41Q15345 812 aa13.26□□□□□ -0.29
ACTN4-209ENST00000586538 CCDC96Q2M329 555 aa13.26□□□□□ -0.29
ACTN4-209ENST00000586538 RRP12Q5JTH9 1297 aaKnown RBP13.26□□□□□ -0.29
ACTN4-209ENST00000586538 VPS53Q5VIR6 699 aa13.26□□□□□ -0.29
ACTN4-209ENST00000586538 IQCA1Q86XH1 822 aa13.26□□□□□ -0.29
ACTN4-209ENST00000586538 NUP133Q8WUM0 1156 aa13.26□□□□□ -0.29
ACTN4-209ENST00000586538 TSEN34Q9BSV6 310 aaKnown RBP13.26□□□□□ -0.29
ACTN4-209ENST00000586538 MOXD2PA6NHM9 499 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms