RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 SENP2Q9HC62 589 aa15.31■□□□□ 0.04
DNMT1-205ENST00000585920 TSKSQ9UJT2 592 aa15.31■□□□□ 0.04
DNMT1-205ENST00000585920 FEM1BQ9UK73 627 aa15.31■□□□□ 0.04
DNMT1-205ENST00000585920 THSD7BQ9C0I4 1608 aa15.31■□□□□ 0.04
DNMT1-205ENST00000585920 TTLL13PA6NNM8 815 aa15.3■□□□□ 0.04
DNMT1-205ENST00000585920 TMEM232C9JQI7 657 aa15.3■□□□□ 0.04
DNMT1-205ENST00000585920 PDHBP11177 359 aa15.3■□□□□ 0.04
DNMT1-205ENST00000585920 GCLCP48506 637 aaPredicted RBP15.3■□□□□ 0.04
DNMT1-205ENST00000585920 HERVK_113P62684 666 aa15.3■□□□□ 0.04
DNMT1-205ENST00000585920 SYNE3Q6ZMZ3 975 aa15.3■□□□□ 0.04
DNMT1-205ENST00000585920 Q6ZUG5 572 aa15.3■□□□□ 0.04
DNMT1-205ENST00000585920 KCTD1Q719H9 257 aa15.3■□□□□ 0.04
DNMT1-205ENST00000585920 CHURC1Q8WUH1 139 aa15.3■□□□□ 0.04
DNMT1-205ENST00000585920 UPF3BQ9BZI7 483 aaKnown RBP15.3■□□□□ 0.04
DNMT1-205ENST00000585920 R3HDMLQ9H3Y0 253 aa15.3■□□□□ 0.04
DNMT1-205ENST00000585920 CPA4Q9UI42 421 aa15.3■□□□□ 0.04
DNMT1-205ENST00000585920 FRMPD2Q68DX3 1309 aaPredicted RBP15.29■□□□□ 0.04
DNMT1-205ENST00000585920 SNHG28P0DPA3 235 aa15.29■□□□□ 0.04
DNMT1-205ENST00000585920 ZNF543Q08ER8 600 aa15.29■□□□□ 0.04
DNMT1-205ENST00000585920 E2F4Q16254 413 aa15.29■□□□□ 0.04
DNMT1-205ENST00000585920 FAM160B2Q86V87 743 aa15.29■□□□□ 0.04
DNMT1-205ENST00000585920 PRPF38AQ8NAV1 312 aaKnown RBP15.29■□□□□ 0.04
DNMT1-205ENST00000585920 GTF3C2Q8WUA4 911 aaPredicted RBP15.29■□□□□ 0.04
DNMT1-205ENST00000585920 NUP133Q8WUM0 1156 aa15.29■□□□□ 0.04
DNMT1-205ENST00000585920 KIFC2Q96AC6 838 aa15.29■□□□□ 0.04
DNMT1-205ENST00000585920 SLF1Q9BQI6 1058 aa15.29■□□□□ 0.04
DNMT1-205ENST00000585920 GPCPD1Q9NPB8 672 aa15.29■□□□□ 0.04
DNMT1-205ENST00000585920 PDRG1Q9NUG6 133 aa15.29■□□□□ 0.04
DNMT1-205ENST00000585920 FBXO28Q9NVF7 368 aa15.29■□□□□ 0.04
DNMT1-205ENST00000585920 SLC12A7Q9Y666 1083 aa15.29■□□□□ 0.04
DNMT1-205ENST00000585920 MYPNQ86TC9 1320 aa15.28■□□□□ 0.04
DNMT1-205ENST00000585920 GPR25O00155 361 aa15.28■□□□□ 0.04
DNMT1-205ENST00000585920 FOXN1O15353 648 aa15.28■□□□□ 0.04
DNMT1-205ENST00000585920 PARP1P09874 1014 aaKnown RBP15.28■□□□□ 0.04
DNMT1-205ENST00000585920 CTCFP49711 727 aaPredicted RBP15.28■□□□□ 0.04
DNMT1-205ENST00000585920 RBM25P49756 843 aaKnown RBP15.28■□□□□ 0.04
DNMT1-205ENST00000585920 STAT2P52630 851 aa15.28■□□□□ 0.04
DNMT1-205ENST00000585920 GPATCH4Q5T3I0 446 aaKnown RBP15.28■□□□□ 0.04
DNMT1-205ENST00000585920 C17orf99Q6UX52 265 aa15.28■□□□□ 0.04
DNMT1-205ENST00000585920 ZNF654Q8IZM8 581 aa15.28■□□□□ 0.04
DNMT1-205ENST00000585920 ANKRD13CQ8N6S4 541 aa15.28■□□□□ 0.04
DNMT1-205ENST00000585920 IL17RAQ96F46 866 aa15.28■□□□□ 0.04
DNMT1-205ENST00000585920 BMP2KQ9NSY1 1161 aaPredicted RBP15.28■□□□□ 0.04
DNMT1-205ENST00000585920 PPP1R9AQ9ULJ8 1098 aa15.28■□□□□ 0.04
DNMT1-205ENST00000585920 CTDP1Q9Y5B0 961 aaPredicted RBP15.28■□□□□ 0.04
DNMT1-205ENST00000585920 SPDYE16A6NNV3 312 aaPredicted RBP15.27■□□□□ 0.04
DNMT1-205ENST00000585920 PLA2G6O60733 806 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 ZBED4O75132 1171 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 DDAH1O94760 285 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 GOLGA8HP0CJ92 632 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 CALM1P0DP23 149 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 CALM2P0DP24 149 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 CALM3P0DP25 149 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 TROAPQ12815 778 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 ASPRV1Q53RT3 343 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 TTBK2Q6IQ55 1244 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 LBX2Q6XYB7 198 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 RASGRP2Q7LDG7 609 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 SGMS1Q86VZ5 419 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 FBXL16Q8N461 479 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 MB21D1Q8N884 522 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 GPRC5AQ8NFJ5 357 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 BRF1Q92994 677 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 ATG4CQ96DT6 458 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 LARP6Q9BRS8 491 aaKnown RBP15.27■□□□□ 0.04
DNMT1-205ENST00000585920 PAGR1Q9BTK6 254 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 RBPJLQ9UBG7 517 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 NAP1L2Q9ULW6 460 aaPredicted RBP15.27■□□□□ 0.04
DNMT1-205ENST00000585920 RABGAP1Q9Y3P9 1069 aa15.27■□□□□ 0.04
DNMT1-205ENST00000585920 KLF18A0A0U1RQI7 1052 aa15.26■□□□□ 0.03
DNMT1-205ENST00000585920 FKTNO75072 461 aa15.26■□□□□ 0.03
DNMT1-205ENST00000585920 BCRP11274 1271 aa15.26■□□□□ 0.03
DNMT1-205ENST00000585920 SLC16A2P36021 539 aa15.26■□□□□ 0.03
DNMT1-205ENST00000585920 SP3Q02447 781 aa15.26■□□□□ 0.03
DNMT1-205ENST00000585920 NOM1Q5C9Z4 860 aaKnown RBP15.26■□□□□ 0.03
DNMT1-205ENST00000585920 CTCFLQ8NI51 663 aaPredicted RBP15.26■□□□□ 0.03
DNMT1-205ENST00000585920 MAP3K14Q99558 947 aa15.26■□□□□ 0.03
DNMT1-205ENST00000585920 MYL10Q9BUA6 226 aa15.26■□□□□ 0.03
DNMT1-205ENST00000585920 BRPF3Q9ULD4 1205 aa15.26■□□□□ 0.03
DNMT1-205ENST00000585920 LOC285556D6RIA3 1793 aa15.26■□□□□ 0.03
DNMT1-205ENST00000585920 PTPRFP10586 1907 aa15.25■□□□□ 0.03
DNMT1-205ENST00000585920 ADGRA2Q96PE1 1338 aa15.25■□□□□ 0.03
DNMT1-205ENST00000585920 KLRF2D3W0D1 207 aa15.25■□□□□ 0.03
DNMT1-205ENST00000585920 VWA5AO00534 786 aa15.25■□□□□ 0.03
DNMT1-205ENST00000585920 ZBTB43O43298 467 aa15.25■□□□□ 0.03
DNMT1-205ENST00000585920 GALR2O43603 387 aaPredicted RBP15.25■□□□□ 0.03
DNMT1-205ENST00000585920 FDX1P10109 184 aa15.25■□□□□ 0.03
DNMT1-205ENST00000585920 HSPA8P11142 646 aaKnown RBP15.25■□□□□ 0.03
DNMT1-205ENST00000585920 KIF5BP33176 963 aa15.25■□□□□ 0.03
DNMT1-205ENST00000585920 NEK4P51957 841 aa15.25■□□□□ 0.03
DNMT1-205ENST00000585920 LBX1P52954 281 aa15.25■□□□□ 0.03
DNMT1-205ENST00000585920 APOBRQ0VD83 1088 aa15.25■□□□□ 0.03
DNMT1-205ENST00000585920 GRM4Q14833 912 aa15.25■□□□□ 0.03
DNMT1-205ENST00000585920 FAM110CQ1W6H9 321 aa15.25■□□□□ 0.03
DNMT1-205ENST00000585920 SYDE2Q5VT97 1194 aa15.25■□□□□ 0.03
DNMT1-205ENST00000585920 BTNL9Q6UXG8 535 aa15.25■□□□□ 0.03
DNMT1-205ENST00000585920 CCAR1Q8IX12 1150 aaKnown RBP15.25■□□□□ 0.03
DNMT1-205ENST00000585920 ZNF296Q8WUU4 475 aaPredicted RBP15.25■□□□□ 0.03
DNMT1-205ENST00000585920 AGXT2Q9BYV1 514 aa15.25■□□□□ 0.03
DNMT1-205ENST00000585920 UBA5Q9GZZ9 404 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms