RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 KLRF2D3W0D1 207 aa19.64■□□□□ 0.73
HMG20B-215ENST00000585741 IRF6O14896 467 aa19.64■□□□□ 0.73
HMG20B-215ENST00000585741 WDR46O15213 610 aaKnown RBP19.64■□□□□ 0.73
HMG20B-215ENST00000585741 GOLGA8HP0CJ92 632 aa19.64■□□□□ 0.73
HMG20B-215ENST00000585741 ADD1P35611 737 aaKnown RBP19.64■□□□□ 0.73
HMG20B-215ENST00000585741 ZNF543Q08ER8 600 aa19.64■□□□□ 0.73
HMG20B-215ENST00000585741 KCTD1Q719H9 257 aa19.64■□□□□ 0.73
HMG20B-215ENST00000585741 TRIM22Q8IYM9 498 aa19.64■□□□□ 0.73
HMG20B-215ENST00000585741 CCDC82Q8N4S0 544 aa19.64■□□□□ 0.73
HMG20B-215ENST00000585741 SPRYD3Q8NCJ5 442 aa19.64■□□□□ 0.73
HMG20B-215ENST00000585741 FOXD4L1Q9NU39 408 aa19.64■□□□□ 0.73
HMG20B-215ENST00000585741 MAD2L2Q9UI95 211 aa19.64■□□□□ 0.73
HMG20B-215ENST00000585741 SMC3Q9UQE7 1217 aa19.64■□□□□ 0.73
HMG20B-215ENST00000585741 PTPN22Q9Y2R2 807 aa19.64■□□□□ 0.73
HMG20B-215ENST00000585741 KIF3AQ9Y496 699 aa19.64■□□□□ 0.73
HMG20B-215ENST00000585741 MYH4Q9Y623 1939 aa19.64■□□□□ 0.73
HMG20B-215ENST00000585741 BRCA2P51587 3418 aa19.64■□□□□ 0.73
HMG20B-215ENST00000585741 POTEFA5A3E0 1075 aa19.63■□□□□ 0.73
HMG20B-215ENST00000585741 TMEM232C9JQI7 657 aa19.63■□□□□ 0.73
HMG20B-215ENST00000585741 SNHG28P0DPA3 235 aa19.63■□□□□ 0.73
HMG20B-215ENST00000585741 CDC27P30260 824 aa19.63■□□□□ 0.73
HMG20B-215ENST00000585741 GTF2A2P52657 109 aa19.63■□□□□ 0.73
HMG20B-215ENST00000585741 SSRP1Q08945 709 aaKnown RBP19.63■□□□□ 0.73
HMG20B-215ENST00000585741 FAM83BQ5T0W9 1011 aa19.63■□□□□ 0.73
HMG20B-215ENST00000585741 SAMD1Q6SPF0 538 aaPredicted RBP19.63■□□□□ 0.73
HMG20B-215ENST00000585741 FASTKD5Q7L8L6 764 aaKnown RBP19.63■□□□□ 0.73
HMG20B-215ENST00000585741 CD99L2Q8TCZ2 262 aa19.63■□□□□ 0.73
HMG20B-215ENST00000585741 CHURC1Q8WUH1 139 aa19.63■□□□□ 0.73
HMG20B-215ENST00000585741 IPO9Q96P70 1041 aaKnown RBP19.63■□□□□ 0.73
HMG20B-215ENST00000585741 LLPHQ9BRT6 129 aaKnown RBP19.63■□□□□ 0.73
HMG20B-215ENST00000585741 TANGO6Q9C0B7 1094 aa19.63■□□□□ 0.73
HMG20B-215ENST00000585741 CTDP1Q9Y5B0 961 aaPredicted RBP19.63■□□□□ 0.73
HMG20B-215ENST00000585741 NID2Q14112 1375 aa19.62■□□□□ 0.73
HMG20B-215ENST00000585741 PALM3A6NDB9 673 aaPredicted RBP19.62■□□□□ 0.73
HMG20B-215ENST00000585741 HMGN5P82970 282 aaKnown RBP19.62■□□□□ 0.73
HMG20B-215ENST00000585741 CUL4AQ13619 759 aa19.62■□□□□ 0.73
HMG20B-215ENST00000585741 SH3D19Q5HYK7 790 aa19.62■□□□□ 0.73
HMG20B-215ENST00000585741 TMTC3Q6ZXV5 915 aa19.62■□□□□ 0.73
HMG20B-215ENST00000585741 STAG2Q8N3U4 1231 aa19.62■□□□□ 0.73
HMG20B-215ENST00000585741 FAM184AQ8NB25 1140 aa19.62■□□□□ 0.73
HMG20B-215ENST00000585741 BRI3BPQ8WY22 251 aa19.62■□□□□ 0.73
HMG20B-215ENST00000585741 ERO1AQ96HE7 468 aa19.62■□□□□ 0.73
HMG20B-215ENST00000585741 INTS4Q96HW7 963 aaKnown RBP19.62■□□□□ 0.73
HMG20B-215ENST00000585741 NUP88Q99567 741 aaPredicted RBP19.62■□□□□ 0.73
HMG20B-215ENST00000585741 EMILIN3Q9NT22 766 aa19.62■□□□□ 0.73
HMG20B-215ENST00000585741 FEM1BQ9UK73 627 aa19.62■□□□□ 0.73
HMG20B-215ENST00000585741 KCNH4Q9UQ05 1017 aa19.62■□□□□ 0.73
HMG20B-215ENST00000585741 A0A0G2JLL6 359 aaPredicted RBP19.61■□□□□ 0.73
HMG20B-215ENST00000585741 PLEKHA8P1O95397 391 aa19.61■□□□□ 0.73
HMG20B-215ENST00000585741 CETPP11597 493 aa19.61■□□□□ 0.73
HMG20B-215ENST00000585741 VCAM1P19320 739 aa19.61■□□□□ 0.73
HMG20B-215ENST00000585741 SLC4A3P48751 1232 aa19.61■□□□□ 0.73
HMG20B-215ENST00000585741 STAT2P52630 851 aa19.61■□□□□ 0.73
HMG20B-215ENST00000585741 PABPC4Q13310 644 aaKnown RBP eCLIP19.61■□□□□ 0.733e-11■□□□□ 9.8
HMG20B-215ENST00000585741 OTUD7BQ6GQQ9 843 aa19.61■□□□□ 0.73
HMG20B-215ENST00000585741 PRRT2Q7Z6L0 340 aaPredicted RBP19.61■□□□□ 0.73
HMG20B-215ENST00000585741 FAM160B2Q86V87 743 aa19.61■□□□□ 0.73
HMG20B-215ENST00000585741 PROCA1Q8NCQ7 364 aaPredicted RBP19.61■□□□□ 0.73
HMG20B-215ENST00000585741 ARMC5Q96C12 935 aa19.61■□□□□ 0.73
HMG20B-215ENST00000585741 C12orf42Q96LP6 360 aa19.61■□□□□ 0.73
HMG20B-215ENST00000585741 SLC26A6Q9BXS9 759 aa19.61■□□□□ 0.73
HMG20B-215ENST00000585741 RPAP3Q9H6T3 665 aaPredicted RBP19.61■□□□□ 0.73
HMG20B-215ENST00000585741 VAT1LQ9HCJ6 419 aa19.61■□□□□ 0.73
HMG20B-215ENST00000585741 RBM27Q9P2N5 1060 aaKnown RBP19.61■□□□□ 0.73
HMG20B-215ENST00000585741 SEC63Q9UGP8 760 aaKnown RBP19.61■□□□□ 0.73
HMG20B-215ENST00000585741 PTPDC1A2A3K4 754 aa19.6■□□□□ 0.73
HMG20B-215ENST00000585741 IFNAR1P17181 557 aa19.6■□□□□ 0.73
HMG20B-215ENST00000585741 RASGRP2Q7LDG7 609 aa19.6■□□□□ 0.73
HMG20B-215ENST00000585741 CMTR1Q8N1G2 835 aaKnown RBP19.6■□□□□ 0.73
HMG20B-215ENST00000585741 WASF1Q92558 559 aa19.6■□□□□ 0.73
HMG20B-215ENST00000585741 RRP36Q96EU6 259 aaKnown RBP19.6■□□□□ 0.73
HMG20B-215ENST00000585741 UBA5Q9GZZ9 404 aa19.6■□□□□ 0.73
HMG20B-215ENST00000585741 CCL15-CCL14A0A0B4J2E2 113 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 USP17L15C9J2P7 530 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 USP17L13C9JLJ4 530 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 USP17L11C9JVI0 530 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 USP17L18D6R9N7 530 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 USP17L22D6RA61 530 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 USP17L17D6RBQ6 530 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 USP17L19D6RCP7 530 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 USP17L20D6RJB6 530 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 FLOT1O75955 427 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 SMARCA1P28370 1054 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 SP3Q02447 781 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 USP17L24Q0WX57 530 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 CCL15Q16663 113 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 KIAA1755Q5JYT7 1200 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 PIBF1Q8WXW3 757 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 PHKBQ93100 1093 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 DDX11Q96FC9 970 aa19.59■□□□□ 0.73
HMG20B-215ENST00000585741 FAM217BQ9NTX9 383 aaPredicted RBP19.59■□□□□ 0.73
HMG20B-215ENST00000585741 RBBP6Q7Z6E9 1792 aaKnown RBP19.58■□□□□ 0.73
HMG20B-215ENST00000585741 PPFIA3O75145 1194 aa19.58■□□□□ 0.72
HMG20B-215ENST00000585741 SLC16A2P36021 539 aa19.58■□□□□ 0.72
HMG20B-215ENST00000585741 IRX3P78415 501 aaPredicted RBP19.58■□□□□ 0.72
HMG20B-215ENST00000585741 SYDE2Q5VT97 1194 aa19.58■□□□□ 0.72
HMG20B-215ENST00000585741 TTBK2Q6IQ55 1244 aa19.58■□□□□ 0.72
HMG20B-215ENST00000585741 SRBD1Q8N5C6 995 aaKnown RBP19.58■□□□□ 0.72
HMG20B-215ENST00000585741 NSUN7Q8NE18 718 aaKnown RBP19.58■□□□□ 0.72
HMG20B-215ENST00000585741 KIFC2Q96AC6 838 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms