RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 MCOLN1Q9GZU1 580 aa25.1■■□□□ 1.61
RETREG3-202ENST00000585726 SPATC1LQ9H0A9 340 aa25.1■■□□□ 1.61
RETREG3-202ENST00000585726 LY9Q9HBG7 655 aa25.1■■□□□ 1.61
RETREG3-202ENST00000585726 EIF5BO60841 1220 aaKnown RBP25.09■■□□□ 1.61
RETREG3-202ENST00000585726 SNHG28P0DPA3 235 aa25.09■■□□□ 1.61
RETREG3-202ENST00000585726 HOXD10P28358 340 aa25.09■■□□□ 1.61
RETREG3-202ENST00000585726 COA7Q96BR5 231 aa25.09■■□□□ 1.61
RETREG3-202ENST00000585726 MOV10L1Q9BXT6 1211 aaKnown RBP25.09■■□□□ 1.61
RETREG3-202ENST00000585726 PRR12Q9ULL5 1215 aa25.09■■□□□ 1.61
RETREG3-202ENST00000585726 CCDC69A6NI79 296 aa25.08■■□□□ 1.61
RETREG3-202ENST00000585726 HMGB1P09429 215 aaKnown RBP25.08■■□□□ 1.61
RETREG3-202ENST00000585726 PARP1P09874 1014 aaKnown RBP25.08■■□□□ 1.61
RETREG3-202ENST00000585726 EXOSC10Q01780 885 aaKnown RBP25.08■■□□□ 1.61
RETREG3-202ENST00000585726 BLOC1S2Q6QNY1 142 aa25.08■■□□□ 1.61
RETREG3-202ENST00000585726 CATIPQ7Z7H3 387 aa25.08■■□□□ 1.61
RETREG3-202ENST00000585726 TNS4Q8IZW8 715 aa25.08■■□□□ 1.61
RETREG3-202ENST00000585726 NUP133Q8WUM0 1156 aa25.08■■□□□ 1.61
RETREG3-202ENST00000585726 UBA5Q9GZZ9 404 aa25.08■■□□□ 1.61
RETREG3-202ENST00000585726 CPVLQ9H3G5 476 aa25.08■■□□□ 1.61
RETREG3-202ENST00000585726 RAVER2Q9HCJ3 691 aaKnown RBP25.08■■□□□ 1.61
RETREG3-202ENST00000585726 PLA2G6O60733 806 aa25.07■■□□□ 1.6
RETREG3-202ENST00000585726 GNRH1P01148 92 aa25.07■■□□□ 1.6
RETREG3-202ENST00000585726 CASTP20810 708 aaKnown RBP25.07■■□□□ 1.6
RETREG3-202ENST00000585726 PSMA5P28066 241 aa25.07■■□□□ 1.6
RETREG3-202ENST00000585726 MAPK4P31152 587 aa25.07■■□□□ 1.6
RETREG3-202ENST00000585726 STAT3P40763 770 aa25.07■■□□□ 1.6
RETREG3-202ENST00000585726 PRKCZQ05513 592 aa25.07■■□□□ 1.6
RETREG3-202ENST00000585726 GPATCH4Q5T3I0 446 aaKnown RBP25.07■■□□□ 1.6
RETREG3-202ENST00000585726 SYDE2Q5VT97 1194 aa25.07■■□□□ 1.6
RETREG3-202ENST00000585726 CCDC174Q6PII3 467 aa25.07■■□□□ 1.6
RETREG3-202ENST00000585726 NCAPG2Q86XI2 1143 aa25.07■■□□□ 1.6
RETREG3-202ENST00000585726 REPS2Q8NFH8 660 aa25.07■■□□□ 1.6
RETREG3-202ENST00000585726 MTA3Q9BTC8 594 aa25.07■■□□□ 1.6
RETREG3-202ENST00000585726 MYL10Q9BUA6 226 aa25.07■■□□□ 1.6
RETREG3-202ENST00000585726 SRRDQ9UH36 339 aa25.07■■□□□ 1.6
RETREG3-202ENST00000585726 GABRQQ9UN88 632 aa25.07■■□□□ 1.6
RETREG3-202ENST00000585726 PTPN22Q9Y2R2 807 aa25.07■■□□□ 1.6
RETREG3-202ENST00000585726 PARP14Q460N5 1801 aa25.07■■□□□ 1.6
RETREG3-202ENST00000585726 ERCC3P19447 782 aa25.06■■□□□ 1.6
RETREG3-202ENST00000585726 FGD1P98174 961 aa25.06■■□□□ 1.6
RETREG3-202ENST00000585726 PKN2Q16513 984 aaKnown RBP25.06■■□□□ 1.6
RETREG3-202ENST00000585726 ASPRV1Q53RT3 343 aa25.06■■□□□ 1.6
RETREG3-202ENST00000585726 GPR142Q7Z601 462 aa25.06■■□□□ 1.6
RETREG3-202ENST00000585726 SLC38A10Q9HBR0 1119 aa25.06■■□□□ 1.6
RETREG3-202ENST00000585726 A0A0G2JMZ2 1700 aa25.06■■□□□ 1.6
RETREG3-202ENST00000585726 SNRNP48Q6IEG0 339 aaKnown RBP25.05■■□□□ 1.6
RETREG3-202ENST00000585726 FBXO46Q6PJ61 603 aaPredicted RBP25.05■■□□□ 1.6
RETREG3-202ENST00000585726 BTNL9Q6UXG8 535 aa25.05■■□□□ 1.6
RETREG3-202ENST00000585726 PLEKHH3Q7Z736 793 aa25.05■■□□□ 1.6
RETREG3-202ENST00000585726 RAB11FIP4Q86YS3 637 aa25.05■■□□□ 1.6
RETREG3-202ENST00000585726 ZNF654Q8IZM8 581 aa25.05■■□□□ 1.6
RETREG3-202ENST00000585726 TMTC2Q8N394 836 aa25.05■■□□□ 1.6
RETREG3-202ENST00000585726 STAG2Q8N3U4 1231 aa25.05■■□□□ 1.6
RETREG3-202ENST00000585726 ZNF214Q9UL59 606 aaPredicted RBP25.05■■□□□ 1.6
RETREG3-202ENST00000585726 PTCH2Q9Y6C5 1203 aa25.05■■□□□ 1.6
RETREG3-202ENST00000585726 WDR19Q8NEZ3 1342 aa25.05■■□□□ 1.6
RETREG3-202ENST00000585726 DHX16O60231 1041 aaKnown RBP25.04■■□□□ 1.6
RETREG3-202ENST00000585726 LIFRP42702 1097 aa25.04■■□□□ 1.6
RETREG3-202ENST00000585726 RAET1EQ8TD07 263 aa25.04■■□□□ 1.6
RETREG3-202ENST00000585726 MGAMO43451 1857 aa25.03■■□□□ 1.6
RETREG3-202ENST00000585726 FDX1P10109 184 aa25.03■■□□□ 1.6
RETREG3-202ENST00000585726 RPS6KB1P23443 525 aa25.03■■□□□ 1.6
RETREG3-202ENST00000585726 FLT3LGP49771 235 aa25.03■■□□□ 1.6
RETREG3-202ENST00000585726 TROAPQ12815 778 aa25.03■■□□□ 1.6
RETREG3-202ENST00000585726 GRM4Q14833 912 aa25.03■■□□□ 1.6
RETREG3-202ENST00000585726 Q6ZUG5 572 aa25.03■■□□□ 1.6
RETREG3-202ENST00000585726 RIOX2Q8IUF8 465 aa25.03■■□□□ 1.6
RETREG3-202ENST00000585726 TEX13BQ9BXU2 312 aa25.03■■□□□ 1.6
RETREG3-202ENST00000585726 VAT1LQ9HCJ6 419 aa25.03■■□□□ 1.6
RETREG3-202ENST00000585726 MAD2L2Q9UI95 211 aa25.03■■□□□ 1.6
RETREG3-202ENST00000585726 RIPK3Q9Y572 518 aa25.03■■□□□ 1.6
RETREG3-202ENST00000585726 SLC12A7Q9Y666 1083 aa25.03■■□□□ 1.6
RETREG3-202ENST00000585726 IVNS1ABPQ9Y6Y0 642 aa25.03■■□□□ 1.6
RETREG3-202ENST00000585726 COL11A1P12107 1806 aaPredicted RBP25.02■■□□□ 1.6
RETREG3-202ENST00000585726 SLC25A27O95847 323 aa25.02■■□□□ 1.6
RETREG3-202ENST00000585726 RXRAP19793 462 aa25.02■■□□□ 1.6
RETREG3-202ENST00000585726 PRMT2P55345 433 aa25.02■■□□□ 1.6
RETREG3-202ENST00000585726 CCDC144CPQ8IYA2 1237 aa25.02■■□□□ 1.6
RETREG3-202ENST00000585726 SHCBP1Q8NEM2 672 aa25.02■■□□□ 1.6
RETREG3-202ENST00000585726 AGBL1Q96MI9 1066 aa25.02■■□□□ 1.6
RETREG3-202ENST00000585726 MROH8Q9H579 483 aa25.02■■□□□ 1.6
RETREG3-202ENST00000585726 NAP1L2Q9ULW6 460 aaPredicted RBP25.02■■□□□ 1.6
RETREG3-202ENST00000585726 KLRF2D3W0D1 207 aa25.01■■□□□ 1.59
RETREG3-202ENST00000585726 DDAH1O94760 285 aa25.01■■□□□ 1.59
RETREG3-202ENST00000585726 SYNE3Q6ZMZ3 975 aa25.01■■□□□ 1.59
RETREG3-202ENST00000585726 RUFY3Q7L099 469 aa25.01■■□□□ 1.59
RETREG3-202ENST00000585726 NUDT12Q9BQG2 462 aa25.01■■□□□ 1.59
RETREG3-202ENST00000585726 UPF3BQ9BZI7 483 aaKnown RBP25.01■■□□□ 1.59
RETREG3-202ENST00000585726 RANBP17Q9H2T7 1088 aaKnown RBP25.01■■□□□ 1.59
RETREG3-202ENST00000585726 ZSWIM6Q9HCJ5 1215 aa25.01■■□□□ 1.59
RETREG3-202ENST00000585726 HOMER2Q9NSB8 354 aa25.01■■□□□ 1.59
RETREG3-202ENST00000585726 CYP46A1Q9Y6A2 500 aa25.01■■□□□ 1.59
RETREG3-202ENST00000585726 PALM3A6NDB9 673 aaPredicted RBP25■■□□□ 1.59
RETREG3-202ENST00000585726 TAL1P17542 331 aaPredicted RBP25■■□□□ 1.59
RETREG3-202ENST00000585726 CYP2B6P20813 491 aa25■■□□□ 1.59
RETREG3-202ENST00000585726 PTPREP23469 700 aa25■■□□□ 1.59
RETREG3-202ENST00000585726 OAZ1P54368 228 aa25■■□□□ 1.59
RETREG3-202ENST00000585726 ADGRF4Q8IZF3 695 aa25■■□□□ 1.59
RETREG3-202ENST00000585726 CTCFLQ8NI51 663 aaPredicted RBP25■■□□□ 1.59
RETREG3-202ENST00000585726 GJD2Q9UKL4 321 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms