RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 SLC4A3P48751 1232 aa14.62□□□□□ -0.07
SS18-225ENST00000585121 STAT2P52630 851 aa14.62□□□□□ -0.07
SS18-225ENST00000585121 HAND2P61296 217 aa14.62□□□□□ -0.07
SS18-225ENST00000585121 SNRNP48Q6IEG0 339 aaKnown RBP14.62□□□□□ -0.07
SS18-225ENST00000585121 FAM160B2Q86V87 743 aa14.62□□□□□ -0.07
SS18-225ENST00000585121 CPXCR1Q8N123 301 aa14.62□□□□□ -0.07
SS18-225ENST00000585121 GMCL1Q96IK5 515 aa14.62□□□□□ -0.07
SS18-225ENST00000585121 NBPF3Q9H094 633 aa14.62□□□□□ -0.07
SS18-225ENST00000585121 ZNF214Q9UL59 606 aaPredicted RBP14.62□□□□□ -0.07
SS18-225ENST00000585121 GREB1LQ9C091 1923 aaPredicted RBP14.62□□□□□ -0.07
SS18-225ENST00000585121 EVI5O60447 810 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 MCCP23508 829 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 AKNAD1Q5T1N1 836 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 REPS2Q8NFH8 660 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 IL17RBQ9NRM6 502 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 ATP2A1O14983 1001 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 NMT2O60551 498 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 PDE4AP27815 886 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 NT5C2P49902 561 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 OAZ1P54368 228 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 TTC22Q5TAA0 569 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 RCSD1Q6JBY9 416 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 STAG1Q8WVM7 1258 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 DDX11Q96FC9 970 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 C11orf49Q9H6J7 331 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 SLC38A10Q9HBR0 1119 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 TCP11L1Q9NUJ3 509 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 FBXO40Q9UH90 709 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 DDX20Q9UHI6 824 aaKnown RBP14.61□□□□□ -0.07
SS18-225ENST00000585121 CTNNA3Q9UI47 895 aa14.61□□□□□ -0.07
SS18-225ENST00000585121 RLFQ13129 1914 aa14.6□□□□□ -0.07
SS18-225ENST00000585121 H0YGN5 161 aa14.6□□□□□ -0.07
SS18-225ENST00000585121 PLA2G6O60733 806 aa14.6□□□□□ -0.07
SS18-225ENST00000585121 TOP1P11387 765 aaKnown RBP14.6□□□□□ -0.07
SS18-225ENST00000585121 LHX8Q68G74 356 aa14.6□□□□□ -0.07
SS18-225ENST00000585121 DIS3LQ8TF46 1054 aaKnown RBP14.6□□□□□ -0.07
SS18-225ENST00000585121 DCAF4Q8WV16 495 aa14.6□□□□□ -0.07
SS18-225ENST00000585121 RUFY2Q8WXA3 655 aa14.6□□□□□ -0.07
SS18-225ENST00000585121 ESR2Q92731 530 aa14.6□□□□□ -0.07
SS18-225ENST00000585121 MAML3Q96JK9 1138 aa14.6□□□□□ -0.07
SS18-225ENST00000585121 DSCC1Q9BVC3 393 aa14.6□□□□□ -0.07
SS18-225ENST00000585121 RAVER2Q9HCJ3 691 aaKnown RBP14.6□□□□□ -0.07
SS18-225ENST00000585121 MTMR7Q9Y216 660 aa14.6□□□□□ -0.07
SS18-225ENST00000585121 DIS3Q9Y2L1 958 aaKnown RBP14.6□□□□□ -0.07
SS18-225ENST00000585121 TACC3Q9Y6A5 838 aa14.6□□□□□ -0.07
SS18-225ENST00000585121 A0A0G2JMZ2 1700 aa14.59□□□□□ -0.07
SS18-225ENST00000585121 PGK2P07205 417 aa14.59□□□□□ -0.07
SS18-225ENST00000585121 IMMTQ16891 758 aaKnown RBP14.59□□□□□ -0.07
SS18-225ENST00000585121 CCDC96Q2M329 555 aa14.59□□□□□ -0.07
SS18-225ENST00000585121 CCDC178Q5BJE1 867 aa14.59□□□□□ -0.07
SS18-225ENST00000585121 KCTD1Q719H9 257 aa14.59□□□□□ -0.07
SS18-225ENST00000585121 CHST13Q8NET6 341 aa14.59□□□□□ -0.07
SS18-225ENST00000585121 CHMP4CQ96CF2 233 aa14.59□□□□□ -0.07
SS18-225ENST00000585121 CEP290O15078 2479 aa14.59□□□□□ -0.07
SS18-225ENST00000585121 CYBAP13498 195 aa14.58□□□□□ -0.08
SS18-225ENST00000585121 ANKRD35Q8N283 1001 aa14.58□□□□□ -0.08
SS18-225ENST00000585121 TTC14Q96N46 770 aa14.58□□□□□ -0.08
SS18-225ENST00000585121 NRBP1Q9UHY1 535 aa14.58□□□□□ -0.08
SS18-225ENST00000585121 SEPT4O43236 478 aa14.57□□□□□ -0.08
SS18-225ENST00000585121 IGHA2P01877 340 aa14.57□□□□□ -0.08
SS18-225ENST00000585121 NOVP48745 357 aa14.57□□□□□ -0.08
SS18-225ENST00000585121 ZNF792Q3KQV3 632 aa14.57□□□□□ -0.08
SS18-225ENST00000585121 TKFCQ3LXA3 575 aa14.57□□□□□ -0.08
SS18-225ENST00000585121 IQCA1Q86XH1 822 aa14.57□□□□□ -0.08
SS18-225ENST00000585121 TBC1D10CQ8IV04 446 aa14.57□□□□□ -0.08
SS18-225ENST00000585121 ARRDC4Q8NCT1 418 aa14.57□□□□□ -0.08
SS18-225ENST00000585121 TMEM47Q9BQJ4 181 aa14.57□□□□□ -0.08
SS18-225ENST00000585121 TINF2Q9BSI4 451 aa14.57□□□□□ -0.08
SS18-225ENST00000585121 RIPK3Q9Y572 518 aa14.57□□□□□ -0.08
SS18-225ENST00000585121 MYH4Q9Y623 1939 aa14.57□□□□□ -0.08
SS18-225ENST00000585121 GSPT1P15170 499 aaKnown RBP14.56□□□□□ -0.08
SS18-225ENST00000585121 MSL3Q8N5Y2 521 aaKnown RBP14.56□□□□□ -0.08
SS18-225ENST00000585121 TRPV1Q8NER1 839 aa14.56□□□□□ -0.08
SS18-225ENST00000585121 CNPY2Q9Y2B0 182 aa14.56□□□□□ -0.08
SS18-225ENST00000585121 RAD50Q92878 1312 aa14.56□□□□□ -0.08
SS18-225ENST00000585121 ZNF236Q9UL36 1845 aa14.56□□□□□ -0.08
SS18-225ENST00000585121 MNX1P50219 401 aaPredicted RBP14.56□□□□□ -0.08
SS18-225ENST00000585121 PRAMEF19Q5SWL8 479 aa14.56□□□□□ -0.08
SS18-225ENST00000585121 CCDC174Q6PII3 467 aa14.56□□□□□ -0.08
SS18-225ENST00000585121 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.56□□□□□ -0.08
SS18-225ENST00000585121 KRT23Q9C075 422 aa14.56□□□□□ -0.08
SS18-225ENST00000585121 ACAD9Q9H845 621 aa14.56□□□□□ -0.08
SS18-225ENST00000585121 CNNM2Q9H8M5 875 aa14.56□□□□□ -0.08
SS18-225ENST00000585121 HOMER2Q9NSB8 354 aa14.56□□□□□ -0.08
SS18-225ENST00000585121 KBTBD13C9JR72 458 aa14.55□□□□□ -0.08
SS18-225ENST00000585121 KDM4AO75164 1064 aa14.55□□□□□ -0.08
SS18-225ENST00000585121 HABP4Q5JVS0 413 aaKnown RBP14.55□□□□□ -0.08
SS18-225ENST00000585121 PRR12Q9ULL5 1215 aa14.55□□□□□ -0.08
SS18-225ENST00000585121 NEDD4P46934 1319 aa14.55□□□□□ -0.08
SS18-225ENST00000585121 POTEB2H3BUK9 544 aa14.54□□□□□ -0.08
SS18-225ENST00000585121 DNM1LO00429 736 aa14.54□□□□□ -0.08
SS18-225ENST00000585121 MYCNP04198 464 aaPredicted RBP14.54□□□□□ -0.08
SS18-225ENST00000585121 RARBP10826 455 aa14.54□□□□□ -0.08
SS18-225ENST00000585121 ALAS1P13196 640 aa14.54□□□□□ -0.08
SS18-225ENST00000585121 CHMLP26374 656 aa14.54□□□□□ -0.08
SS18-225ENST00000585121 SYDE2Q5VT97 1194 aa14.54□□□□□ -0.08
SS18-225ENST00000585121 ZNF467Q7Z7K2 595 aaPredicted RBP14.54□□□□□ -0.08
SS18-225ENST00000585121 DGKHQ86XP1 1220 aa14.54□□□□□ -0.08
SS18-225ENST00000585121 C7orf61Q8IZ16 206 aa14.54□□□□□ -0.08
SS18-225ENST00000585121 AGBL1Q96MI9 1066 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms