RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 ZNF214Q9UL59 606 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-226ENST00000585026 MROH7Q68CQ1 1323 aa12.84□□□□□ -0.35
CSNK1D-226ENST00000585026 SYNGAP1Q96PV0 1343 aa12.84□□□□□ -0.35
CSNK1D-226ENST00000585026 FRMPD3Q5JV73 1810 aa12.83□□□□□ -0.35
CSNK1D-226ENST00000585026 ZBED4O75132 1171 aa12.83□□□□□ -0.36
CSNK1D-226ENST00000585026 ZNF865P0CJ78 1059 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-226ENST00000585026 ACLYP53396 1101 aa12.83□□□□□ -0.36
CSNK1D-226ENST00000585026 CTR9Q6PD62 1173 aa12.83□□□□□ -0.36
CSNK1D-226ENST00000585026 ANKRD33Q7Z3H0 272 aa12.83□□□□□ -0.36
CSNK1D-226ENST00000585026 PRPF38AQ8NAV1 312 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-226ENST00000585026 PCSK9Q8NBP7 692 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-226ENST00000585026 GLT1D1Q96MS3 346 aa12.83□□□□□ -0.36
CSNK1D-226ENST00000585026 TTYH1Q9H313 450 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-226ENST00000585026 NYAP2Q9P242 653 aa12.83□□□□□ -0.36
CSNK1D-226ENST00000585026 ELP1O95163 1332 aa12.83□□□□□ -0.36
CSNK1D-226ENST00000585026 NAV1Q8NEY1 1877 aa12.82□□□□□ -0.36
CSNK1D-226ENST00000585026 CYP2D7A0A087X1C5 515 aa12.82□□□□□ -0.36
CSNK1D-226ENST00000585026 DUSP11O75319 330 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-226ENST00000585026 PPIGQ13427 754 aaKnown RBP eCLIP12.82□□□□□ -0.366e-22■■■■□ 20.1
CSNK1D-226ENST00000585026 SNRNP48Q6IEG0 339 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-226ENST00000585026 GIMAP6Q6P9H5 292 aa12.82□□□□□ -0.36
CSNK1D-226ENST00000585026 MAMDC4Q6UXC1 1216 aa12.82□□□□□ -0.36
CSNK1D-226ENST00000585026 ZNF467Q7Z7K2 595 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-226ENST00000585026 VTI1AQ96AJ9 217 aa12.82□□□□□ -0.36
CSNK1D-226ENST00000585026 FBXO40Q9UH90 709 aa12.82□□□□□ -0.36
CSNK1D-226ENST00000585026 ZHX1Q9UKY1 873 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-226ENST00000585026 F5H6K3 240 aa12.81□□□□□ -0.36
CSNK1D-226ENST00000585026 ATP2A1O14983 1001 aa12.81□□□□□ -0.36
CSNK1D-226ENST00000585026 ADAMTS4O75173 837 aa12.81□□□□□ -0.36
CSNK1D-226ENST00000585026 TIMP1P01033 207 aa12.81□□□□□ -0.36
CSNK1D-226ENST00000585026 TAL1P17542 331 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-226ENST00000585026 KLRC3Q07444 240 aa12.81□□□□□ -0.36
CSNK1D-226ENST00000585026 FAAP100Q0VG06 881 aa12.81□□□□□ -0.36
CSNK1D-226ENST00000585026 KCNA10Q16322 511 aa12.81□□□□□ -0.36
CSNK1D-226ENST00000585026 SBK1Q52WX2 424 aa12.81□□□□□ -0.36
CSNK1D-226ENST00000585026 ANKRD35Q8N283 1001 aa12.81□□□□□ -0.36
CSNK1D-226ENST00000585026 REPS2Q8NFH8 660 aa12.81□□□□□ -0.36
CSNK1D-226ENST00000585026 ABHD16BQ9H3Z7 469 aa12.81□□□□□ -0.36
CSNK1D-226ENST00000585026 RLFQ13129 1914 aa12.81□□□□□ -0.36
CSNK1D-226ENST00000585026 A0A0G2JMZ2 1700 aa12.81□□□□□ -0.36
CSNK1D-226ENST00000585026 TLR3O15455 904 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 C6orf222P0C671 652 aaPredicted RBP12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 FDX1P10109 184 aa12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 DNAJB2P25686 324 aa12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 ITGB8P26012 769 aa12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 CST5P28325 142 aaPredicted RBP12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 SLC4A3P48751 1232 aa12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 LRRFIP1Q32MZ4 808 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 MFSD5Q6N075 450 aa12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 ZNF444Q8N0Y2 327 aaPredicted RBP12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 CPXCR1Q8N123 301 aa12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 TMEM199Q8N511 208 aa12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 KLHDC9Q8NEP7 349 aa12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 CHST13Q8NET6 341 aa12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 GPATCH3Q96I76 525 aa12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 LRRCC1Q9C099 1032 aa12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 FEM1BQ9UK73 627 aa12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 SYNPO2Q9UMS6 1093 aa12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 SYNRGQ9UMZ2 1314 aa12.8□□□□□ -0.36
CSNK1D-226ENST00000585026 LTBP2Q14767 1821 aa12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 DNAJC25-GNG10A0A024R161 153 aa12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 A0A0U1RQG5 324 aaPredicted RBP12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 MINDY4BA8MYZ0 360 aa12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 SNAI1O95863 264 aaPredicted RBP12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 NDUFB10O96000 172 aa12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 GNAT2P19087 354 aa12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 OAZ1P54368 228 aa12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 EPHB4P54760 987 aa12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 ACVR2BQ13705 512 aa12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 SLFNL1Q499Z3 407 aa12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 CENPQQ7L2Z9 268 aaPredicted RBP12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 KIFC2Q96AC6 838 aa12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 TIFAQ96CG3 184 aa12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 STRBPQ96SI9 672 aaKnown RBP12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 GAS2L1Q99501 681 aaPredicted RBP12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 PUS7LQ9H0K6 701 aaKnown RBP12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 MTIF3Q9H2K0 278 aaKnown RBP12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 ZNF576Q9H609 170 aa12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 CLIP2Q9UDT6 1046 aa12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 PCDHB15Q9Y5E8 787 aa12.79□□□□□ -0.36
CSNK1D-226ENST00000585026 ARVCFO00192 962 aa12.78□□□□□ -0.36
CSNK1D-226ENST00000585026 ASGR1P07306 291 aa12.78□□□□□ -0.36
CSNK1D-226ENST00000585026 RASA1P20936 1047 aa12.78□□□□□ -0.36
CSNK1D-226ENST00000585026 HDAC1Q13547 482 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-226ENST00000585026 GNASQ5JWF2 1037 aa12.78□□□□□ -0.36
CSNK1D-226ENST00000585026 PPP4R3BQ5MIZ7 849 aa12.78□□□□□ -0.36
CSNK1D-226ENST00000585026 PSRC1Q6PGN9 363 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-226ENST00000585026 CCDC129Q6ZRS4 1044 aa12.78□□□□□ -0.36
CSNK1D-226ENST00000585026 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.78□□□□□ -0.367e-6■□□□□ 10.8
CSNK1D-226ENST00000585026 LENG1Q96BZ8 264 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-226ENST00000585026 NUP88Q99567 741 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-226ENST00000585026 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.78□□□□□ -0.36
CSNK1D-226ENST00000585026 PRDM6Q9NQX0 595 aa12.78□□□□□ -0.36
CSNK1D-226ENST00000585026 ECHDC1Q9NTX5 307 aa12.78□□□□□ -0.36
CSNK1D-226ENST00000585026 TBX21Q9UL17 535 aa12.78□□□□□ -0.36
CSNK1D-226ENST00000585026 SMIM22K7EJ46 135 aa12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 APPP05067 770 aa12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 ZFYP08048 801 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 SLC3A2P08195 630 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms