RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 PLS1Q14651 629 aa19.79■□□□□ 0.76
CSNK1D-225ENST00000584913 CENPQQ7L2Z9 268 aaPredicted RBP19.79■□□□□ 0.76
CSNK1D-225ENST00000584913 NCAPG2Q86XI2 1143 aa19.79■□□□□ 0.76
CSNK1D-225ENST00000584913 LRRC47Q8N1G4 583 aaKnown RBP19.79■□□□□ 0.76
CSNK1D-225ENST00000584913 DCAF4Q8WV16 495 aa19.79■□□□□ 0.76
CSNK1D-225ENST00000584913 ESR2Q92731 530 aa19.79■□□□□ 0.76
CSNK1D-225ENST00000584913 DEFB118Q96PH6 123 aa19.79■□□□□ 0.76
CSNK1D-225ENST00000584913 NBPF3Q9H094 633 aa19.79■□□□□ 0.76
CSNK1D-225ENST00000584913 NRBP1Q9UHY1 535 aa19.79■□□□□ 0.76
CSNK1D-225ENST00000584913 TACC3Q9Y6A5 838 aa19.79■□□□□ 0.76
CSNK1D-225ENST00000584913 ZBED4O75132 1171 aa19.78■□□□□ 0.76
CSNK1D-225ENST00000584913 TOP1P11387 765 aaKnown RBP19.78■□□□□ 0.76
CSNK1D-225ENST00000584913 SLC1A4P43007 532 aa19.78■□□□□ 0.76
CSNK1D-225ENST00000584913 CACNB2Q08289 660 aaPredicted RBP19.78■□□□□ 0.76
CSNK1D-225ENST00000584913 IMMTQ16891 758 aaKnown RBP19.78■□□□□ 0.76
CSNK1D-225ENST00000584913 DPP9Q86TI2 863 aa19.78■□□□□ 0.76
CSNK1D-225ENST00000584913 NUP88Q99567 741 aaPredicted RBP19.78■□□□□ 0.76
CSNK1D-225ENST00000584913 HTATIP2Q9BUP3 242 aa19.78■□□□□ 0.76
CSNK1D-225ENST00000584913 FBXO40Q9UH90 709 aa19.78■□□□□ 0.76
CSNK1D-225ENST00000584913 OGDHLQ9ULD0 1010 aa19.78■□□□□ 0.76
CSNK1D-225ENST00000584913 MKI67P46013 3256 aaKnown RBP19.78■□□□□ 0.76
CSNK1D-225ENST00000584913 PDE4DIPQ5VU43 2346 aa19.77■□□□□ 0.76
CSNK1D-225ENST00000584913 FARP2O94887 1054 aaPredicted RBP19.77■□□□□ 0.76
CSNK1D-225ENST00000584913 KCTD2Q14681 263 aa19.77■□□□□ 0.76
CSNK1D-225ENST00000584913 TBC1D10CQ8IV04 446 aa19.77■□□□□ 0.76
CSNK1D-225ENST00000584913 MSL3Q8N5Y2 521 aaKnown RBP19.77■□□□□ 0.76
CSNK1D-225ENST00000584913 CNNM2Q9H8M5 875 aa19.77■□□□□ 0.76
CSNK1D-225ENST00000584913 CHMLP26374 656 aa19.76■□□□□ 0.75
CSNK1D-225ENST00000584913 TRIM32Q13049 653 aa19.76■□□□□ 0.75
CSNK1D-225ENST00000584913 CCL14Q16627 93 aa19.76■□□□□ 0.75
CSNK1D-225ENST00000584913 DGKHQ86XP1 1220 aa19.76■□□□□ 0.75
CSNK1D-225ENST00000584913 CHST13Q8NET6 341 aa19.76■□□□□ 0.75
CSNK1D-225ENST00000584913 MMP19Q99542 508 aa19.76■□□□□ 0.75
CSNK1D-225ENST00000584913 TOMM22Q9NS69 142 aa19.76■□□□□ 0.75
CSNK1D-225ENST00000584913 CTDP1Q9Y5B0 961 aaPredicted RBP19.76■□□□□ 0.75
CSNK1D-225ENST00000584913 TMEM232C9JQI7 657 aa19.75■□□□□ 0.75
CSNK1D-225ENST00000584913 TFRCP02786 760 aaKnown RBP19.75■□□□□ 0.75
CSNK1D-225ENST00000584913 HAND2P61296 217 aa19.75■□□□□ 0.75
CSNK1D-225ENST00000584913 TKFCQ3LXA3 575 aa19.75■□□□□ 0.75
CSNK1D-225ENST00000584913 SNRNP48Q6IEG0 339 aaKnown RBP19.75■□□□□ 0.75
CSNK1D-225ENST00000584913 BTNL9Q6UXG8 535 aa19.75■□□□□ 0.75
CSNK1D-225ENST00000584913 IQCA1Q86XH1 822 aa19.75■□□□□ 0.75
CSNK1D-225ENST00000584913 NPLOC4Q8TAT6 608 aa19.75■□□□□ 0.75
CSNK1D-225ENST00000584913 KIFC2Q96AC6 838 aa19.75■□□□□ 0.75
CSNK1D-225ENST00000584913 FLRT1Q9NZU1 646 aa19.75■□□□□ 0.75
CSNK1D-225ENST00000584913 PNMA2Q9UL42 364 aa19.75■□□□□ 0.75
CSNK1D-225ENST00000584913 NMT2O60551 498 aa19.74■□□□□ 0.75
CSNK1D-225ENST00000584913 CYBAP13498 195 aa19.74■□□□□ 0.75
CSNK1D-225ENST00000584913 ZNF467Q7Z7K2 595 aaPredicted RBP19.74■□□□□ 0.75
CSNK1D-225ENST00000584913 ANKS1AQ92625 1134 aa19.74■□□□□ 0.75
CSNK1D-225ENST00000584913 MAML3Q96JK9 1138 aa19.74■□□□□ 0.75
CSNK1D-225ENST00000584913 TMEM47Q9BQJ4 181 aa19.74■□□□□ 0.75
CSNK1D-225ENST00000584913 KRT23Q9C075 422 aa19.74■□□□□ 0.75
CSNK1D-225ENST00000584913 INCENPQ9NQS7 918 aa19.74■□□□□ 0.75
CSNK1D-225ENST00000584913 NEDD4P46934 1319 aa19.74■□□□□ 0.75
CSNK1D-225ENST00000584913 SGSM2O43147 1006 aa19.73■□□□□ 0.75
CSNK1D-225ENST00000584913 COBLO75128 1261 aa19.73■□□□□ 0.75
CSNK1D-225ENST00000584913 SNHG28P0DPA3 235 aa19.73■□□□□ 0.75
CSNK1D-225ENST00000584913 ZNF792Q3KQV3 632 aa19.73■□□□□ 0.75
CSNK1D-225ENST00000584913 RRP12Q5JTH9 1297 aaKnown RBP19.73■□□□□ 0.75
CSNK1D-225ENST00000584913 NECAB2Q7Z6G3 386 aa19.73■□□□□ 0.75
CSNK1D-225ENST00000584913 FRMPD3Q5JV73 1810 aa19.73■□□□□ 0.75
CSNK1D-225ENST00000584913 DNAJC25-GNG10A0A024R161 153 aa19.72■□□□□ 0.75
CSNK1D-225ENST00000584913 MCCP23508 829 aa19.72■□□□□ 0.75
CSNK1D-225ENST00000584913 GPATCH4Q5T3I0 446 aaKnown RBP19.72■□□□□ 0.75
CSNK1D-225ENST00000584913 LHX8Q68G74 356 aa19.72■□□□□ 0.75
CSNK1D-225ENST00000584913 SAMD1Q6SPF0 538 aaPredicted RBP19.72■□□□□ 0.75
CSNK1D-225ENST00000584913 PPP4R2Q9NY27 417 aa19.72■□□□□ 0.75
CSNK1D-225ENST00000584913 DDX20Q9UHI6 824 aaKnown RBP19.72■□□□□ 0.75
CSNK1D-225ENST00000584913 CCND3P30281 292 aaPredicted RBP19.71■□□□□ 0.75
CSNK1D-225ENST00000584913 MAF1Q9H063 256 aa19.71■□□□□ 0.75
CSNK1D-225ENST00000584913 IL25Q9H293 177 aa19.71■□□□□ 0.75
CSNK1D-225ENST00000584913 U3KPZ7 1027 aaPredicted RBP19.71■□□□□ 0.75
CSNK1D-225ENST00000584913 SYNGAP1Q96PV0 1343 aa19.71■□□□□ 0.75
CSNK1D-225ENST00000584913 SEPT4O43236 478 aa19.7■□□□□ 0.74
CSNK1D-225ENST00000584913 PDHBP11177 359 aa19.7■□□□□ 0.74
CSNK1D-225ENST00000584913 IKQ13123 557 aaPredicted RBP19.7■□□□□ 0.74
CSNK1D-225ENST00000584913 BMP2KLQ5H9B9 411 aa19.7■□□□□ 0.74
CSNK1D-225ENST00000584913 MAMDC4Q6UXC1 1216 aa19.7■□□□□ 0.74
CSNK1D-225ENST00000584913 RANBP17Q9H2T7 1088 aaKnown RBP19.7■□□□□ 0.74
CSNK1D-225ENST00000584913 ACAD9Q9H845 621 aa19.7■□□□□ 0.74
CSNK1D-225ENST00000584913 PRR12Q9ULL5 1215 aa19.7■□□□□ 0.74
CSNK1D-225ENST00000584913 PLXNA1Q9UIW2 1896 aa19.7■□□□□ 0.74
CSNK1D-225ENST00000584913 ZNF536O15090 1300 aa19.7■□□□□ 0.74
CSNK1D-225ENST00000584913 ZNFX1Q9P2E3 1918 aaKnown RBP19.69■□□□□ 0.74
CSNK1D-225ENST00000584913 KDM4AO75164 1064 aa19.69■□□□□ 0.74
CSNK1D-225ENST00000584913 CYP2C19P33261 490 aa19.69■□□□□ 0.74
CSNK1D-225ENST00000584913 KCTD1Q719H9 257 aa19.69■□□□□ 0.74
CSNK1D-225ENST00000584913 CPXCR1Q8N123 301 aa19.69■□□□□ 0.74
CSNK1D-225ENST00000584913 TINF2Q9BSI4 451 aa19.69■□□□□ 0.74
CSNK1D-225ENST00000584913 RAVER2Q9HCJ3 691 aaKnown RBP19.69■□□□□ 0.74
CSNK1D-225ENST00000584913 RIPK3Q9Y572 518 aa19.69■□□□□ 0.74
CSNK1D-225ENST00000584913 PFASO15067 1338 aa19.69■□□□□ 0.74
CSNK1D-225ENST00000584913 ICAM1P05362 532 aa19.68■□□□□ 0.74
CSNK1D-225ENST00000584913 COL6A1P12109 1028 aa19.68■□□□□ 0.74
CSNK1D-225ENST00000584913 MNX1P50219 401 aaPredicted RBP19.68■□□□□ 0.74
CSNK1D-225ENST00000584913 ZNF543Q08ER8 600 aa19.68■□□□□ 0.74
CSNK1D-225ENST00000584913 CCDC96Q2M329 555 aa19.68■□□□□ 0.74
CSNK1D-225ENST00000584913 MAP4K1Q92918 833 aa19.68■□□□□ 0.74
CSNK1D-225ENST00000584913 DDX11Q96FC9 970 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms