RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 NDUFB10O96000 172 aa19.84■□□□□ 0.77
CCDC57-219ENST00000584717 CLTBP09497 229 aa19.84■□□□□ 0.77
CCDC57-219ENST00000584717 ITGB8P26012 769 aa19.84■□□□□ 0.77
CCDC57-219ENST00000584717 KLRC3Q07444 240 aa19.84■□□□□ 0.77
CCDC57-219ENST00000584717 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.84■□□□□ 0.77
CCDC57-219ENST00000584717 KBTBD3Q8NAB2 608 aa19.84■□□□□ 0.77
CCDC57-219ENST00000584717 NYAP2Q9P242 653 aa19.84■□□□□ 0.77
CCDC57-219ENST00000584717 RIPK3Q9Y572 518 aa19.84■□□□□ 0.77
CCDC57-219ENST00000584717 MYH4Q9Y623 1939 aa19.84■□□□□ 0.77
CCDC57-219ENST00000584717 CPXCR1Q8N123 301 aa19.83■□□□□ 0.77
CCDC57-219ENST00000584717 APPBP2Q92624 585 aa19.83■□□□□ 0.77
CCDC57-219ENST00000584717 DDX11Q96FC9 970 aa19.83■□□□□ 0.77
CCDC57-219ENST00000584717 EPB41L4AQ9HCS5 686 aaPredicted RBP19.83■□□□□ 0.77
CCDC57-219ENST00000584717 CLIP2Q9UDT6 1046 aa19.83■□□□□ 0.77
CCDC57-219ENST00000584717 TACC3Q9Y6A5 838 aa19.83■□□□□ 0.77
CCDC57-219ENST00000584717 VCANP13611 3396 aa19.83■□□□□ 0.76
CCDC57-219ENST00000584717 PRUNE2Q8WUY3 3088 aa19.82■□□□□ 0.76
CCDC57-219ENST00000584717 SYNRGQ9UMZ2 1314 aa19.82■□□□□ 0.76
CCDC57-219ENST00000584717 ADAMTS4O75173 837 aa19.82■□□□□ 0.76
CCDC57-219ENST00000584717 TDO2P48775 406 aa19.82■□□□□ 0.76
CCDC57-219ENST00000584717 GIMAP6Q6P9H5 292 aa19.82■□□□□ 0.76
CCDC57-219ENST00000584717 KIFC2Q96AC6 838 aa19.82■□□□□ 0.76
CCDC57-219ENST00000584717 CDX2Q99626 313 aaPredicted RBP19.82■□□□□ 0.76
CCDC57-219ENST00000584717 ZHX1Q9UKY1 873 aaPredicted RBP19.82■□□□□ 0.76
CCDC57-219ENST00000584717 M0R2C6 588 aa19.81■□□□□ 0.76
CCDC57-219ENST00000584717 RNF113AO15541 343 aaKnown RBP19.81■□□□□ 0.76
CCDC57-219ENST00000584717 GPAA1O43292 621 aa19.81■□□□□ 0.76
CCDC57-219ENST00000584717 PRDM1O75626 825 aa19.81■□□□□ 0.76
CCDC57-219ENST00000584717 RAG1P15918 1043 aa19.81■□□□□ 0.76
CCDC57-219ENST00000584717 EPHB4P54760 987 aa19.81■□□□□ 0.76
CCDC57-219ENST00000584717 SMAD3P84022 425 aaKnown RBP19.81■□□□□ 0.76
CCDC57-219ENST00000584717 PRPF38AQ8NAV1 312 aaKnown RBP19.81■□□□□ 0.76
CCDC57-219ENST00000584717 GPATCH3Q96I76 525 aa19.81■□□□□ 0.76
CCDC57-219ENST00000584717 COL25A1Q9BXS0 654 aaPredicted RBP19.81■□□□□ 0.76
CCDC57-219ENST00000584717 SEMA6BQ9H3T3 888 aa19.81■□□□□ 0.76
CCDC57-219ENST00000584717 RAVER2Q9HCJ3 691 aaKnown RBP19.81■□□□□ 0.76
CCDC57-219ENST00000584717 CTDP1Q9Y5B0 961 aaPredicted RBP19.81■□□□□ 0.76
CCDC57-219ENST00000584717 SYNGAP1Q96PV0 1343 aa19.8■□□□□ 0.76
CCDC57-219ENST00000584717 DNAJC25-GNG10A0A024R161 153 aa19.8■□□□□ 0.76
CCDC57-219ENST00000584717 IGKV6D-41A0A0C4DH26 115 aa19.8■□□□□ 0.76
CCDC57-219ENST00000584717 KIAA0355O15063 1070 aa19.8■□□□□ 0.76
CCDC57-219ENST00000584717 ZBED4O75132 1171 aa19.8■□□□□ 0.76
CCDC57-219ENST00000584717 SNAI1O95863 264 aaPredicted RBP19.8■□□□□ 0.76
CCDC57-219ENST00000584717 ACLYP53396 1101 aa19.8■□□□□ 0.76
CCDC57-219ENST00000584717 LRRC47Q8N1G4 583 aaKnown RBP19.8■□□□□ 0.76
CCDC57-219ENST00000584717 CEP95Q96GE4 821 aa19.8■□□□□ 0.76
CCDC57-219ENST00000584717 RNPC3Q96LT9 517 aaKnown RBP19.8■□□□□ 0.76
CCDC57-219ENST00000584717 TTYH1Q9H313 450 aaPredicted RBP19.8■□□□□ 0.76
CCDC57-219ENST00000584717 TMEM39AQ9NV64 488 aa19.8■□□□□ 0.76
CCDC57-219ENST00000584717 FAM184BQ9ULE4 1060 aa19.8■□□□□ 0.76
CCDC57-219ENST00000584717 MYADML2A6NDP7 307 aa19.79■□□□□ 0.76
CCDC57-219ENST00000584717 APPP05067 770 aa19.79■□□□□ 0.76
CCDC57-219ENST00000584717 IRX5P78411 483 aaPredicted RBP19.79■□□□□ 0.76
CCDC57-219ENST00000584717 ZNF444Q8N0Y2 327 aaPredicted RBP19.79■□□□□ 0.76
CCDC57-219ENST00000584717 MSL3Q8N5Y2 521 aaKnown RBP19.79■□□□□ 0.76
CCDC57-219ENST00000584717 MYLIPQ8WY64 445 aa19.79■□□□□ 0.76
CCDC57-219ENST00000584717 TSEN34Q9BSV6 310 aaKnown RBP19.79■□□□□ 0.76
CCDC57-219ENST00000584717 STARD7Q9NQZ5 370 aa19.79■□□□□ 0.76
CCDC57-219ENST00000584717 MCM3APO60318 1980 aa19.79■□□□□ 0.76
CCDC57-219ENST00000584717 ATP2A1O14983 1001 aa19.78■□□□□ 0.76
CCDC57-219ENST00000584717 ZFYP08048 801 aaPredicted RBP19.78■□□□□ 0.76
CCDC57-219ENST00000584717 FPGSQ05932 587 aa19.78■□□□□ 0.76
CCDC57-219ENST00000584717 FAAP100Q0VG06 881 aa19.78■□□□□ 0.76
CCDC57-219ENST00000584717 KCNA10Q16322 511 aa19.78■□□□□ 0.76
CCDC57-219ENST00000584717 MAMDC4Q6UXC1 1216 aa19.78■□□□□ 0.76
CCDC57-219ENST00000584717 ANKRD35Q8N283 1001 aa19.78■□□□□ 0.76
CCDC57-219ENST00000584717 KLHDC9Q8NEP7 349 aa19.78■□□□□ 0.76
CCDC57-219ENST00000584717 MAFAQ8NHW3 353 aaPredicted RBP19.78■□□□□ 0.76
CCDC57-219ENST00000584717 NUP133Q8WUM0 1156 aa19.78■□□□□ 0.76
CCDC57-219ENST00000584717 SLC38A10Q9HBR0 1119 aa19.78■□□□□ 0.76
CCDC57-219ENST00000584717 MTMR4Q9NYA4 1195 aa19.78■□□□□ 0.76
CCDC57-219ENST00000584717 ADCY6O43306 1168 aa19.77■□□□□ 0.76
CCDC57-219ENST00000584717 GNAT2P19087 354 aa19.77■□□□□ 0.76
CCDC57-219ENST00000584717 ACVR2BQ13705 512 aa19.77■□□□□ 0.76
CCDC57-219ENST00000584717 ANKRD33Q7Z3H0 272 aa19.77■□□□□ 0.76
CCDC57-219ENST00000584717 MKL1Q969V6 931 aa19.77■□□□□ 0.76
CCDC57-219ENST00000584717 FGD4Q96M96 766 aa19.77■□□□□ 0.76
CCDC57-219ENST00000584717 DCTPP1Q9H773 170 aa19.77■□□□□ 0.76
CCDC57-219ENST00000584717 ZNF287Q9HBT7 754 aa19.77■□□□□ 0.76
CCDC57-219ENST00000584717 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.77■□□□□ 0.76
CCDC57-219ENST00000584717 FEM1BQ9UK73 627 aa19.77■□□□□ 0.76
CCDC57-219ENST00000584717 ISY1Q9ULR0 285 aaKnown RBP19.77■□□□□ 0.76
CCDC57-219ENST00000584717 SPTBN5Q9NRC6 3674 aaKnown RBP19.77■□□□□ 0.76
CCDC57-219ENST00000584717 MOXD2PA6NHM9 499 aa19.76■□□□□ 0.75
CCDC57-219ENST00000584717 DCDC2CA8MYV0 355 aa19.76■□□□□ 0.75
CCDC57-219ENST00000584717 DUSP11O75319 330 aaKnown RBP19.76■□□□□ 0.75
CCDC57-219ENST00000584717 TTLL1O95922 423 aa19.76■□□□□ 0.75
CCDC57-219ENST00000584717 C6orf222P0C671 652 aaPredicted RBP19.76■□□□□ 0.75
CCDC57-219ENST00000584717 CCSAPQ6IQ19 270 aaPredicted RBP19.76■□□□□ 0.75
CCDC57-219ENST00000584717 ZNF467Q7Z7K2 595 aaPredicted RBP19.76■□□□□ 0.75
CCDC57-219ENST00000584717 IFNL3Q8IZI9 196 aa19.76■□□□□ 0.75
CCDC57-219ENST00000584717 SEC62Q99442 399 aaKnown RBP19.76■□□□□ 0.75
CCDC57-219ENST00000584717 HOMER2Q9NSB8 354 aa19.76■□□□□ 0.75
CCDC57-219ENST00000584717 PATL2C9JE40 543 aaKnown RBP19.75■□□□□ 0.75
CCDC57-219ENST00000584717 CCDC144BQ3MJ40 725 aa19.75■□□□□ 0.75
CCDC57-219ENST00000584717 SLFN13Q68D06 897 aa19.75■□□□□ 0.75
CCDC57-219ENST00000584717 GMCL1P1Q8NEA9 526 aa19.75■□□□□ 0.75
CCDC57-219ENST00000584717 CHMP4CQ96CF2 233 aa19.75■□□□□ 0.75
CCDC57-219ENST00000584717 TOX2Q96NM4 488 aa19.75■□□□□ 0.75
CCDC57-219ENST00000584717 FBXO40Q9UH90 709 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms