RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 VPS18Q9P253 973 aa13.37□□□□□ -0.27
ERBB2-218ENST00000584450 PSDA5PKW4 1024 aaPredicted RBP13.36□□□□□ -0.27
ERBB2-218ENST00000584450 SNAP25P60880 206 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 CYP26C1Q6V0L0 522 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 TBCKQ8TEA7 893 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 GSDMAQ96QA5 445 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 FBXO2Q9UK22 296 aaPredicted RBP13.36□□□□□ -0.27
ERBB2-218ENST00000584450 ABCC12Q96J65 1359 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 BICDL2A1A5D9 508 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 GTPBP6O43824 516 aaPredicted RBP13.36□□□□□ -0.27
ERBB2-218ENST00000584450 COPB1P53618 953 aaKnown RBP13.36□□□□□ -0.27
ERBB2-218ENST00000584450 RAPGEF1Q13905 1077 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 KRT25Q7Z3Z0 450 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 C2CD5Q86YS7 1000 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 SYCP3Q8IZU3 236 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 FNBP4Q8N3X1 1017 aaPredicted RBP13.36□□□□□ -0.27
ERBB2-218ENST00000584450 NEK11Q8NG66 645 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 NSUN4Q96CB9 384 aaKnown RBP13.36□□□□□ -0.27
ERBB2-218ENST00000584450 NAPGQ99747 312 aaPredicted RBP13.36□□□□□ -0.27
ERBB2-218ENST00000584450 TBCAO75347 108 aaKnown RBP13.36□□□□□ -0.27
ERBB2-218ENST00000584450 OR52Z1P0C646 297 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 EVX2Q03828 476 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 CLEC4GQ6UXB4 293 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 NEK8Q86SG6 692 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 SLC35F6Q8N357 371 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 GBP3Q9H0R5 595 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 FER1L4A9Z1Z3 1794 aa13.36□□□□□ -0.27
ERBB2-218ENST00000584450 STX10O60499 249 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 ZMYND10O75800 440 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 CYP27A1Q02318 531 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 SP4Q02446 784 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 UBE2SQ16763 222 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 NCAPH2Q6IBW4 605 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 RRAGAQ7L523 313 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 TMTC1Q8IUR5 882 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 CEP112Q8N8E3 955 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 TRIML1Q8N9V2 468 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 KRT83P78385 493 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 OR8K1Q8NGG5 319 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 HPS3Q969F9 1004 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 TMEM47Q9BQJ4 181 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 PCDHA4Q9UN74 947 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 MRPS25P82663 173 aaKnown RBP13.35□□□□□ -0.27
ERBB2-218ENST00000584450 CYP4A11Q02928 519 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 ODF2Q5BJF6 829 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 ALS2CR12Q96Q35 445 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 AGXT2Q9BYV1 514 aa13.35□□□□□ -0.27
ERBB2-218ENST00000584450 BCCIPQ9P287 314 aaKnown RBP eCLIP13.35□□□□□ -0.27
ERBB2-218ENST00000584450 XDHP47989 1333 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 RPS6KA4O75676 772 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 CDK8P49336 464 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 PTF1AQ7RTS3 328 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 FOXP4Q8IVH2 680 aaPredicted RBP13.34□□□□□ -0.27
ERBB2-218ENST00000584450 JAKMIP2Q96AA8 810 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 BRIP1Q9BX63 1249 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 NARFQ9UHQ1 456 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 PARP3Q9Y6F1 533 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 VIRMAQ69YN4 1812 aaKnown RBP13.34□□□□□ -0.27
ERBB2-218ENST00000584450 DDX39AO00148 427 aaKnown RBP13.34□□□□□ -0.27
ERBB2-218ENST00000584450 ERCC5P28715 1186 aaPredicted RBP13.34□□□□□ -0.27
ERBB2-218ENST00000584450 TOB1P50616 345 aaPredicted RBP13.34□□□□□ -0.27
ERBB2-218ENST00000584450 KRT31Q15323 416 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 NKX2-3Q8TAU0 364 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 TACC1O75410 805 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 CFBP00751 764 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 PLCG1P19174 1290 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 PTPAQ15257 358 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 IQCEQ6IPM2 695 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 NBPF3Q9H094 633 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 FAM107BQ9H098 131 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 TMEM260Q9NX78 707 aa13.34□□□□□ -0.27
ERBB2-218ENST00000584450 NTRK3Q16288 839 aa13.33□□□□□ -0.28
ERBB2-218ENST00000584450 EARS2Q5JPH6 523 aaKnown RBP13.33□□□□□ -0.28
ERBB2-218ENST00000584450 CNNM4Q6P4Q7 775 aa13.33□□□□□ -0.28
ERBB2-218ENST00000584450 IFT81Q8WYA0 676 aa13.33□□□□□ -0.28
ERBB2-218ENST00000584450 TUBGCP2Q9BSJ2 902 aa13.33□□□□□ -0.28
ERBB2-218ENST00000584450 OSBPL5Q9H0X9 879 aaPredicted RBP13.33□□□□□ -0.28
ERBB2-218ENST00000584450 PPP1R12BO60237 982 aaPredicted RBP13.33□□□□□ -0.28
ERBB2-218ENST00000584450 SMAP1Q8IYB5 467 aaPredicted RBP13.33□□□□□ -0.28
ERBB2-218ENST00000584450 RDH13Q8NBN7 331 aa13.33□□□□□ -0.28
ERBB2-218ENST00000584450 PCDHA12Q9UN75 941 aa13.33□□□□□ -0.28
ERBB2-218ENST00000584450 EPN1Q9Y6I3 576 aaPredicted RBP13.33□□□□□ -0.28
ERBB2-218ENST00000584450 USP17L5A8MUK1 530 aa13.33□□□□□ -0.28
ERBB2-218ENST00000584450 TUBB4AP04350 444 aa13.33□□□□□ -0.28
ERBB2-218ENST00000584450 SSR1P43307 286 aaKnown RBP13.33□□□□□ -0.28
ERBB2-218ENST00000584450 UBXN2AP68543 259 aa13.33□□□□□ -0.28
ERBB2-218ENST00000584450 CPXCR1Q8N123 301 aa13.33□□□□□ -0.28
ERBB2-218ENST00000584450 ZNF710Q8N1W2 664 aa13.33□□□□□ -0.28
ERBB2-218ENST00000584450 WDR24Q96S15 920 aa13.33□□□□□ -0.28
ERBB2-218ENST00000584450 FAM217BQ9NTX9 383 aaPredicted RBP13.33□□□□□ -0.28
ERBB2-218ENST00000584450 WDR19Q8NEZ3 1342 aa13.32□□□□□ -0.28
ERBB2-218ENST00000584450 FGFR2P21802 821 aa13.32□□□□□ -0.28
ERBB2-218ENST00000584450 PRCPP42785 496 aa13.32□□□□□ -0.28
ERBB2-218ENST00000584450 KMT5BQ4FZB7 885 aa13.32□□□□□ -0.28
ERBB2-218ENST00000584450 PRR16Q569H4 304 aa13.32□□□□□ -0.28
ERBB2-218ENST00000584450 PSTPIP2Q9H939 334 aa13.32□□□□□ -0.28
ERBB2-218ENST00000584450 CWC15Q9P013 229 aaKnown RBP13.32□□□□□ -0.28
ERBB2-218ENST00000584450 PNPLA7Q6ZV29 1317 aa13.32□□□□□ -0.28
ERBB2-218ENST00000584450 GDF11O95390 407 aa13.32□□□□□ -0.28
ERBB2-218ENST00000584450 VEGFAP15692 232 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms