RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 ZBED4O75132 1171 aa9.74□□□□□ -0.85
ERBB2-216ENST00000584014 PDHBP11177 359 aa9.74□□□□□ -0.85
ERBB2-216ENST00000584014 HOXA7P31268 230 aaPredicted RBP9.74□□□□□ -0.85
ERBB2-216ENST00000584014 STAT2P52630 851 aa9.74□□□□□ -0.85
ERBB2-216ENST00000584014 ANAPC15P60006 121 aa9.74□□□□□ -0.85
ERBB2-216ENST00000584014 STK3Q13188 491 aa9.74□□□□□ -0.85
ERBB2-216ENST00000584014 CCDC174Q6PII3 467 aa9.74□□□□□ -0.85
ERBB2-216ENST00000584014 CMTR1Q8N1G2 835 aaKnown RBP9.74□□□□□ -0.85
ERBB2-216ENST00000584014 TMTC2Q8N394 836 aa9.74□□□□□ -0.85
ERBB2-216ENST00000584014 CTCFLQ8NI51 663 aaPredicted RBP9.74□□□□□ -0.85
ERBB2-216ENST00000584014 ANKS1AQ92625 1134 aa9.74□□□□□ -0.85
ERBB2-216ENST00000584014 SLF1Q9BQI6 1058 aa9.74□□□□□ -0.85
ERBB2-216ENST00000584014 HOXC10Q9NYD6 342 aa9.74□□□□□ -0.85
ERBB2-216ENST00000584014 FEM1BQ9UK73 627 aa9.74□□□□□ -0.85
ERBB2-216ENST00000584014 BRPF3Q9ULD4 1205 aa9.74□□□□□ -0.85
ERBB2-216ENST00000584014 THSD7BQ9C0I4 1608 aa9.74□□□□□ -0.85
ERBB2-216ENST00000584014 GOLGA8AA7E2F4 631 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 KLRF2D3W0D1 207 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 GPR25O00155 361 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 ZBTB43O43298 467 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 PPFIA3O75145 1194 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 FMNL1O95466 1100 aaPredicted RBP9.73□□□□□ -0.85
ERBB2-216ENST00000584014 LIFRP42702 1097 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 GCLCP48506 637 aaPredicted RBP9.73□□□□□ -0.85
ERBB2-216ENST00000584014 CTCFP49711 727 aaPredicted RBP9.73□□□□□ -0.85
ERBB2-216ENST00000584014 CCT2P78371 535 aaKnown RBP9.73□□□□□ -0.85
ERBB2-216ENST00000584014 SP3Q02447 781 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 ZNF543Q08ER8 600 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 KIF22Q14807 665 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 ASPRV1Q53RT3 343 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 SYDE2Q5VT97 1194 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 FAM160B2Q86V87 743 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 HOMER1Q86YM7 354 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 STAG2Q8N3U4 1231 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 PRPF38AQ8NAV1 312 aaKnown RBP9.73□□□□□ -0.85
ERBB2-216ENST00000584014 GPRC5AQ8NFJ5 357 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 CD99L2Q8TCZ2 262 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 GMCL1Q96IK5 515 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 TM6SF1Q9BZW5 370 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 RAVER2Q9HCJ3 691 aaKnown RBP9.73□□□□□ -0.85
ERBB2-216ENST00000584014 ZCCHC17Q9NP64 241 aaKnown RBP9.73□□□□□ -0.85
ERBB2-216ENST00000584014 HOMER2Q9NSB8 354 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 SAGE1Q9NXZ1 904 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 PPP1R9AQ9ULJ8 1098 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 SYNPO2Q9UMS6 1093 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 SLC45A1Q9Y2W3 748 aa9.73□□□□□ -0.85
ERBB2-216ENST00000584014 PCNTO95613 3336 aa9.72□□□□□ -0.85
ERBB2-216ENST00000584014 SPDYE16A6NNV3 312 aaPredicted RBP9.72□□□□□ -0.85
ERBB2-216ENST00000584014 FKTNO75072 461 aa9.72□□□□□ -0.85
ERBB2-216ENST00000584014 CALM1P0DP23 149 aa9.72□□□□□ -0.85
ERBB2-216ENST00000584014 CALM2P0DP24 149 aa9.72□□□□□ -0.85
ERBB2-216ENST00000584014 CALM3P0DP25 149 aa9.72□□□□□ -0.85
ERBB2-216ENST00000584014 HSPA8P11142 646 aaKnown RBP9.72□□□□□ -0.85
ERBB2-216ENST00000584014 KIF5BP33176 963 aa9.72□□□□□ -0.85
ERBB2-216ENST00000584014 NOVP48745 357 aa9.72□□□□□ -0.85
ERBB2-216ENST00000584014 AK2P54819 239 aa9.72□□□□□ -0.85
ERBB2-216ENST00000584014 GRM4Q14833 912 aa9.72□□□□□ -0.85
ERBB2-216ENST00000584014 RTN1Q16799 776 aa9.72□□□□□ -0.85
ERBB2-216ENST00000584014 GPATCH4Q5T3I0 446 aaKnown RBP9.72□□□□□ -0.85
ERBB2-216ENST00000584014 NCAPG2Q86XI2 1143 aa9.72□□□□□ -0.85
ERBB2-216ENST00000584014 ZNF296Q8WUU4 475 aaPredicted RBP9.72□□□□□ -0.85
ERBB2-216ENST00000584014 BTBD7Q9P203 1132 aa9.72□□□□□ -0.85
ERBB2-216ENST00000584014 RBPJLQ9UBG7 517 aa9.72□□□□□ -0.85
ERBB2-216ENST00000584014 PRR12Q9ULL5 1215 aa9.72□□□□□ -0.85
ERBB2-216ENST00000584014 WDR19Q8NEZ3 1342 aa9.72□□□□□ -0.85
ERBB2-216ENST00000584014 COL11A1P12107 1806 aaPredicted RBP9.72□□□□□ -0.85
ERBB2-216ENST00000584014 hCG_1642624A0A1W2PR95 340 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 VWA5AO00534 786 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 DTNBO60941 627 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 DDAH1O94760 285 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 ALAS1P13196 640 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 TAL1P17542 331 aaPredicted RBP9.71□□□□□ -0.86
ERBB2-216ENST00000584014 BRD2P25440 801 aaKnown RBP9.71□□□□□ -0.86
ERBB2-216ENST00000584014 PSMC4P43686 418 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 METAP2P50579 478 aaKnown RBP eCLIP9.71□□□□□ -0.86
ERBB2-216ENST00000584014 FXR2P51116 673 aaKnown RBP eCLIP9.71□□□□□ -0.86
ERBB2-216ENST00000584014 ERVK-9P63128 1117 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 ERVK-24P63145 666 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 TROAPQ12815 778 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 MKRN4PQ13434 485 aaPredicted RBP9.71□□□□□ -0.86
ERBB2-216ENST00000584014 TOB2Q14106 344 aaPredicted RBP9.71□□□□□ -0.86
ERBB2-216ENST00000584014 Q3C1V9 767 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 USH1GQ495M9 461 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 SNRNP48Q6IEG0 339 aaKnown RBP9.71□□□□□ -0.86
ERBB2-216ENST00000584014 APOA5Q6Q788 366 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 C17orf99Q6UX52 265 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 ADGRF4Q8IZF3 695 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 FANCBQ8NB91 859 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 TBC1D32Q96NH3 1257 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 MTA3Q9BTC8 594 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 ARHGAP39Q9C0H5 1083 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 NCOA5Q9HCD5 579 aaKnown RBP9.71□□□□□ -0.86
ERBB2-216ENST00000584014 TXNRD2Q9NNW7 524 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 MAD2L2Q9UI95 211 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 RABGAP1Q9Y3P9 1069 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 CASP8AP2Q9UKL3 1982 aa9.71□□□□□ -0.86
ERBB2-216ENST00000584014 TNPO2O14787 897 aaKnown RBP9.7□□□□□ -0.86
ERBB2-216ENST00000584014 PLEKHA8P1O95397 391 aa9.7□□□□□ -0.86
ERBB2-216ENST00000584014 STAT3P40763 770 aa9.7□□□□□ -0.86
ERBB2-216ENST00000584014 RBM25P49756 843 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms