RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 SLC6A18Q96N87 628 aa6.22□□□□□ -1.41
PPP4R1-227ENST00000583988 HDAC8Q9BY41 377 aa6.22□□□□□ -1.41
PPP4R1-227ENST00000583988 FOXP3Q9BZS1 431 aa6.22□□□□□ -1.41
PPP4R1-227ENST00000583988 SUCOQ9UBS9 1254 aaKnown RBP6.22□□□□□ -1.41
PPP4R1-227ENST00000583988 EBF1Q9UH73 591 aa6.22□□□□□ -1.41
PPP4R1-227ENST00000583988 SLC12A7Q9Y666 1083 aa6.22□□□□□ -1.41
PPP4R1-227ENST00000583988 A0A1W2PQH9 124 aa6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 FKTNO75072 461 aa6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 RBL2Q08999 1139 aa6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 DUSP4Q13115 394 aa6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 TNNI3KQ59H18 835 aa6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 WAPLQ7Z5K2 1190 aa6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 SPPL2CQ8IUH8 684 aa6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 USHBP1Q8N6Y0 703 aa6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 FAM169BQ8N8A8 192 aa6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 BHLHE22Q8NFJ8 381 aaPredicted RBP6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 ANAPC16Q96DE5 110 aa6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 TCTN2Q96GX1 697 aa6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 PRDM14Q9GZV8 571 aa6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 MKRN2Q9H000 416 aaKnown RBP6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 SP110Q9HB58 689 aa6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 GPR160Q9UJ42 338 aa6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 ZMYM5Q9UJ78 669 aa6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 ZNF214Q9UL59 606 aaPredicted RBP6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 MRVI1Q9Y6F6 885 aa6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 LTBP3Q9NS15 1303 aa6.21□□□□□ -1.42
PPP4R1-227ENST00000583988 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 MEIS1O00470 390 aa6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 NFIBO00712 420 aa6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 PRAMEF1O95521 474 aa6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 TSPAN15O95858 294 aa6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 C1QTNF9P0C862 333 aa6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 ETFBP38117 255 aa6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 GALK1P51570 392 aa6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 PMS1P54277 932 aaKnown RBP6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 PCBP3P57721 371 aaKnown RBP6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 NBPF6Q5VWK0 638 aa6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 RNF111Q6ZNA4 994 aa6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 LILRA2Q8N149 483 aa6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 ZNF655Q8N720 491 aaPredicted RBP6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 DAGLBQ8NCG7 672 aa6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 UBXN4Q92575 508 aa6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 NBPF4Q96M43 638 aa6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 HIRIP3Q9BW71 556 aaPredicted RBP6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 TCFL5Q9UL49 500 aa6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 MINPP1Q9UNW1 487 aa6.2□□□□□ -1.42
PPP4R1-227ENST00000583988 PSPNO60542 156 aa6.19□□□□□ -1.42
PPP4R1-227ENST00000583988 USP2O75604 605 aaPredicted RBP6.19□□□□□ -1.42
PPP4R1-227ENST00000583988 SYPP08247 313 aa6.19□□□□□ -1.42
PPP4R1-227ENST00000583988 TMEM253P0C7T8 217 aa6.19□□□□□ -1.42
PPP4R1-227ENST00000583988 CHRNEQ04844 493 aa6.19□□□□□ -1.42
PPP4R1-227ENST00000583988 PPP2R5EQ16537 467 aa6.19□□□□□ -1.42
PPP4R1-227ENST00000583988 ANKRD39Q53RE8 183 aa6.19□□□□□ -1.42
PPP4R1-227ENST00000583988 ANKLE2Q86XL3 938 aa6.19□□□□□ -1.42
PPP4R1-227ENST00000583988 ANKS4BQ8N8V4 417 aa6.19□□□□□ -1.42
PPP4R1-227ENST00000583988 ZNF408Q9H9D4 720 aa6.19□□□□□ -1.42
PPP4R1-227ENST00000583988 PRKAG3Q9UGI9 489 aa6.19□□□□□ -1.42
PPP4R1-227ENST00000583988 FBXL21Q9UKT6 434 aa6.19□□□□□ -1.42
PPP4R1-227ENST00000583988 C9IYK1 514 aa6.18□□□□□ -1.42
PPP4R1-227ENST00000583988 SIGLEC6O43699 453 aa6.18□□□□□ -1.42
PPP4R1-227ENST00000583988 STK10O94804 968 aaKnown RBP6.18□□□□□ -1.42
PPP4R1-227ENST00000583988 PDE6BP35913 854 aa6.18□□□□□ -1.42
PPP4R1-227ENST00000583988 AUHQ13825 339 aaKnown RBP6.18□□□□□ -1.42
PPP4R1-227ENST00000583988 NR0B2Q15466 257 aa6.18□□□□□ -1.42
PPP4R1-227ENST00000583988 BBS9Q3SYG4 887 aa6.18□□□□□ -1.42
PPP4R1-227ENST00000583988 SIRT2Q8IXJ6 389 aa6.18□□□□□ -1.42
PPP4R1-227ENST00000583988 LINC01599Q8WXQ3 324 aa6.18□□□□□ -1.42
PPP4R1-227ENST00000583988 KCNN1Q92952 543 aa6.18□□□□□ -1.42
PPP4R1-227ENST00000583988 TOX2Q96NM4 488 aa6.18□□□□□ -1.42
PPP4R1-227ENST00000583988 SLC6A17Q9H1V8 727 aa6.18□□□□□ -1.42
PPP4R1-227ENST00000583988 PHAXQ9H814 394 aaKnown RBP6.18□□□□□ -1.42
PPP4R1-227ENST00000583988 CWC22Q9HCG8 908 aaKnown RBP6.18□□□□□ -1.42
PPP4R1-227ENST00000583988 CHST7Q9NS84 486 aa6.18□□□□□ -1.42
PPP4R1-227ENST00000583988 SMAD7O15105 426 aaKnown RBP6.17□□□□□ -1.42
PPP4R1-227ENST00000583988 KRT1P04264 644 aa6.17□□□□□ -1.42
PPP4R1-227ENST00000583988 SLC14A2Q15849 920 aa6.17□□□□□ -1.42
PPP4R1-227ENST00000583988 ZPBP2Q6X784 338 aa6.17□□□□□ -1.42
PPP4R1-227ENST00000583988 ATG14Q6ZNE5 492 aa6.17□□□□□ -1.42
PPP4R1-227ENST00000583988 ZNF605Q86T29 641 aa6.17□□□□□ -1.42
PPP4R1-227ENST00000583988 PPFIBP1Q86W92 1011 aa6.17□□□□□ -1.42
PPP4R1-227ENST00000583988 LINC00116Q8NCU8 138 aa6.17□□□□□ -1.42
PPP4R1-227ENST00000583988 SMARCC1Q92922 1105 aaPredicted RBP6.17□□□□□ -1.42
PPP4R1-227ENST00000583988 INTS4Q96HW7 963 aaKnown RBP6.17□□□□□ -1.42
PPP4R1-227ENST00000583988 G6PC3Q9BUM1 346 aa6.17□□□□□ -1.42
PPP4R1-227ENST00000583988 GFOD1Q9NXC2 390 aa6.17□□□□□ -1.42
PPP4R1-227ENST00000583988 YBX2Q9Y2T7 364 aaKnown RBP6.17□□□□□ -1.42
PPP4R1-227ENST00000583988 PCDHB12Q9Y5F1 795 aa6.17□□□□□ -1.42
PPP4R1-227ENST00000583988 TMEM82A0PJX8 343 aa6.16□□□□□ -1.42
PPP4R1-227ENST00000583988 ETV2O00321 342 aaPredicted RBP6.16□□□□□ -1.42
PPP4R1-227ENST00000583988 CFPP27918 469 aa6.16□□□□□ -1.42
PPP4R1-227ENST00000583988 GNPTABQ3T906 1256 aa6.16□□□□□ -1.42
PPP4R1-227ENST00000583988 AXDND1Q5T1B0 1012 aaPredicted RBP6.16□□□□□ -1.42
PPP4R1-227ENST00000583988 CEP128Q6ZU80 1094 aa6.16□□□□□ -1.42
PPP4R1-227ENST00000583988 CCDC144CPQ8IYA2 1237 aa6.16□□□□□ -1.42
PPP4R1-227ENST00000583988 LRRC56Q8IYG6 542 aaPredicted RBP6.16□□□□□ -1.42
PPP4R1-227ENST00000583988 C7orf61Q8IZ16 206 aa6.16□□□□□ -1.42
PPP4R1-227ENST00000583988 SLC26A8Q96RN1 970 aa6.16□□□□□ -1.42
PPP4R1-227ENST00000583988 ZNF281Q9Y2X9 895 aa6.16□□□□□ -1.42
PPP4R1-227ENST00000583988 TCAF2A6NFQ2 919 aa6.15□□□□□ -1.42
PPP4R1-227ENST00000583988 NPIPB6E9PJ23 425 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms