RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 GUCD1Q96NT3 240 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 APBA2Q99767 749 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 PAGR1Q9BTK6 254 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 TRIM34Q9BYJ4 488 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 FLRT1Q9NZU1 646 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 DDX20Q9UHI6 824 aaKnown RBP6.53□□□□□ -1.36
VAPA-207ENST00000583879 ZBTB21Q9ULJ3 1066 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 CEP290O15078 2479 aa6.53□□□□□ -1.36
VAPA-207ENST00000583879 FLT1P17948 1338 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 AK9Q5TCS8 1911 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 MGAMO43451 1857 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 SLC15A5A6NIM6 579 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 DNM1LO00429 736 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 CNMDO75829 334 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 GH2P01242 217 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 CYP2E1P05181 493 aaPredicted RBP6.52□□□□□ -1.37
VAPA-207ENST00000583879 HLA-DOAP06340 250 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 HOXC6P09630 235 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 CNGA1P29973 690 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 CCDC158Q5M9N0 1113 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 TATDN1Q6P1N9 297 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 ADGRA1Q86SQ6 560 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 NPLOC4Q8TAT6 608 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 CWC22Q9HCG8 908 aaKnown RBP6.52□□□□□ -1.37
VAPA-207ENST00000583879 GPR108Q9NPR9 543 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 SNRKQ9NRH2 765 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 PRKAG2Q9UGJ0 569 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 SAP30BPQ9UHR5 308 aaKnown RBP6.52□□□□□ -1.37
VAPA-207ENST00000583879 NDUFB9Q9Y6M9 179 aa6.52□□□□□ -1.37
VAPA-207ENST00000583879 PNMA6EA0A0J9YXQ4 647 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 STRNO43815 780 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 IGHA2P01877 340 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 GNAI2P04899 355 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 CYP2C19P33261 490 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 RARSP54136 660 aaKnown RBP6.51□□□□□ -1.37
VAPA-207ENST00000583879 USP14P54578 494 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 DYNLL1P63167 89 aaKnown RBP6.51□□□□□ -1.37
VAPA-207ENST00000583879 GRB14Q14449 540 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 SHHQ15465 462 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 ZYXQ15942 572 aaKnown RBP6.51□□□□□ -1.37
VAPA-207ENST00000583879 TTC39AQ5SRH9 613 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 WDR78Q5VTH9 848 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 LBX2Q6XYB7 198 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 SLC39A5Q6ZMH5 540 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 ARRDC4Q8NCT1 418 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 TRPV1Q8NER1 839 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 ZNF512BQ96KM6 892 aaPredicted RBP6.51□□□□□ -1.37
VAPA-207ENST00000583879 PHOX2BQ99453 314 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 CDX2Q99626 313 aaPredicted RBP6.51□□□□□ -1.37
VAPA-207ENST00000583879 FEZ1Q99689 392 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 USB1Q9BQ65 265 aaKnown RBP6.51□□□□□ -1.37
VAPA-207ENST00000583879 DBNDD2Q9BQY9 259 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 KIAA1683Q9H0B3 1180 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 SEMA6BQ9H3T3 888 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 BTBD7Q9P203 1132 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 SERPINB13Q9UIV8 391 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 IVNS1ABPQ9Y6Y0 642 aa6.51□□□□□ -1.37
VAPA-207ENST00000583879 PHIPQ8WWQ0 1821 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 DOCK1Q14185 1865 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 IPO8O15397 1037 aaKnown RBP6.5□□□□□ -1.37
VAPA-207ENST00000583879 VCAM1P19320 739 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 CYP7A1P22680 504 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 ZAP70P43403 619 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 USP5P45974 858 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 WNT7BP56706 349 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 RTP1P59025 263 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 COG2Q14746 738 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 RAB3GAP1Q15042 981 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 ABCB5Q2M3G0 1257 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 CERKLQ49MI3 558 aaPredicted RBP6.5□□□□□ -1.37
VAPA-207ENST00000583879 TNNI3KQ59H18 835 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 GJC2Q5T442 439 aaPredicted RBP6.5□□□□□ -1.37
VAPA-207ENST00000583879 DPP9Q86TI2 863 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 TTC6Q86TZ1 520 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 KRI1Q8N9T8 703 aaKnown RBP6.5□□□□□ -1.37
VAPA-207ENST00000583879 ACER1Q8TDN7 264 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 EHD4Q9H223 541 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 CABP5Q9NP86 173 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 PIH1D3Q9NQM4 214 aaKnown RBP6.5□□□□□ -1.37
VAPA-207ENST00000583879 HOXC10Q9NYD6 342 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 FPGT-TNNI3KV9GXZ4 949 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 MYH2Q9UKX2 1941 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 DOCK2Q92608 1830 aa6.5□□□□□ -1.37
VAPA-207ENST00000583879 SEPT4O43236 478 aa6.49□□□□□ -1.37
VAPA-207ENST00000583879 SURF6O75683 361 aaKnown RBP6.49□□□□□ -1.37
VAPA-207ENST00000583879 DXOO77932 396 aaKnown RBP6.49□□□□□ -1.37
VAPA-207ENST00000583879 CYBAP13498 195 aa6.49□□□□□ -1.37
VAPA-207ENST00000583879 GUCY1A2P33402 732 aa6.49□□□□□ -1.37
VAPA-207ENST00000583879 PLCD1P51178 756 aa6.49□□□□□ -1.37
VAPA-207ENST00000583879 SMAD3P84022 425 aaKnown RBP6.49□□□□□ -1.37
VAPA-207ENST00000583879 ATP8B2P98198 1209 aa6.49□□□□□ -1.37
VAPA-207ENST00000583879 C9orf50Q5SZB4 431 aa6.49□□□□□ -1.37
VAPA-207ENST00000583879 C1orf53Q5VUE5 145 aa6.49□□□□□ -1.37
VAPA-207ENST00000583879 OLFML2BQ68BL8 750 aa6.49□□□□□ -1.37
VAPA-207ENST00000583879 CERS3Q8IU89 383 aa6.49□□□□□ -1.37
VAPA-207ENST00000583879 MIGA1Q8NAN2 632 aa6.49□□□□□ -1.37
VAPA-207ENST00000583879 MAFAQ8NHW3 353 aaPredicted RBP6.49□□□□□ -1.37
VAPA-207ENST00000583879 BADQ92934 168 aa6.49□□□□□ -1.37
VAPA-207ENST00000583879 RPAP3Q9H6T3 665 aaPredicted RBP6.49□□□□□ -1.37
VAPA-207ENST00000583879 NXF1Q9UBU9 619 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms