RNA–Protein interactions for RNA: ENST00000583483.1

CDH8-210, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 380 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-210ENST00000583483 DLL1O00548 723 aa8.24□□□□□ -1.09
CDH8-210ENST00000583483 FSCN2O14926 492 aa8.24□□□□□ -1.09
CDH8-210ENST00000583483 DDX3YO15523 660 aaKnown RBP8.24□□□□□ -1.09
CDH8-210ENST00000583483 RAB11FIP3O75154 756 aa8.24□□□□□ -1.09
CDH8-210ENST00000583483 ANXA1P04083 346 aa8.24□□□□□ -1.09
CDH8-210ENST00000583483 PRPF40BQ6NWY9 871 aaKnown RBP8.24□□□□□ -1.09
CDH8-210ENST00000583483 COPS6Q7L5N1 327 aa8.24□□□□□ -1.09
CDH8-210ENST00000583483 FAM161BQ96MY7 647 aa8.24□□□□□ -1.09
CDH8-210ENST00000583483 LNPKQ9C0E8 428 aa8.24□□□□□ -1.09
CDH8-210ENST00000583483 ATG3Q9NT62 314 aa8.24□□□□□ -1.09
CDH8-210ENST00000583483 C9orf78Q9NZ63 289 aaPredicted RBP8.24□□□□□ -1.09
CDH8-210ENST00000583483 USP16Q9Y5T5 823 aa8.24□□□□□ -1.09
CDH8-210ENST00000583483 LRP5O75197 1615 aa8.24□□□□□ -1.09
CDH8-210ENST00000583483 PALLDQ8WX93 1383 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 RGPD3A6NKT7 1758 aaPredicted RBP8.23□□□□□ -1.09
CDH8-210ENST00000583483 RGPD4Q7Z3J3 1758 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 PRPF40AO75400 957 aaKnown RBP8.23□□□□□ -1.09
CDH8-210ENST00000583483 GDF11O95390 407 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 ESRRAP11474 423 aaPredicted RBP8.23□□□□□ -1.09
CDH8-210ENST00000583483 MYL6BP14649 208 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 ITPKAP23677 461 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 FAAP100Q0VG06 881 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 GCKRQ14397 625 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 HSP90AB3PQ58FF7 597 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 ANKRD45Q5TZF3 282 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 MEX3CQ5U5Q3 659 aaKnown RBP8.23□□□□□ -1.09
CDH8-210ENST00000583483 KIF6Q6ZMV9 814 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 SKAP1Q86WV1 359 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 ERC1Q8IUD2 1116 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 CACTIN-AS1Q8N1I8 211 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 C3orf58Q8NDZ4 430 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 RGS22Q8NE09 1264 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 FBF1Q8TES7 1133 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 UPF2Q9HAU5 1272 aaKnown RBP8.23□□□□□ -1.09
CDH8-210ENST00000583483 NOP53Q9NZM5 478 aaKnown RBP8.23□□□□□ -1.09
CDH8-210ENST00000583483 PARP2Q9UGN5 583 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 USP21Q9UK80 565 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 COL24A1Q17RW2 1714 aa8.23□□□□□ -1.09
CDH8-210ENST00000583483 ADAM11O75078 769 aa8.22□□□□□ -1.09
CDH8-210ENST00000583483 IGKV5-2P06315 115 aa8.22□□□□□ -1.09
CDH8-210ENST00000583483 HSPA1LP34931 641 aa8.22□□□□□ -1.09
CDH8-210ENST00000583483 FCGRTP55899 365 aa8.22□□□□□ -1.09
CDH8-210ENST00000583483 CD163Q86VB7 1156 aa8.22□□□□□ -1.09
CDH8-210ENST00000583483 TMEM151AQ8N4L1 468 aa8.22□□□□□ -1.09
CDH8-210ENST00000583483 DTWD1Q8N5C7 304 aa8.22□□□□□ -1.09
CDH8-210ENST00000583483 MARCH10Q8NA82 808 aaPredicted RBP8.22□□□□□ -1.09
CDH8-210ENST00000583483 LRRCC1Q9C099 1032 aa8.22□□□□□ -1.09
CDH8-210ENST00000583483 TRPC5Q9UL62 973 aaPredicted RBP8.22□□□□□ -1.09
CDH8-210ENST00000583483 ASAP1Q9ULH1 1129 aa8.22□□□□□ -1.09
CDH8-210ENST00000583483 NOP58Q9Y2X3 529 aaKnown RBP8.22□□□□□ -1.09
CDH8-210ENST00000583483 MYH14Q7Z406 1995 aaKnown RBP8.22□□□□□ -1.09
CDH8-210ENST00000583483 PNMA6EA0A0J9YXQ4 647 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 C1QTNF9BB2RNN3 333 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 H3BRJ5 948 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 PIK3R2O00459 728 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 SRGAP3O43295 1099 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 NBPF7P0C2Y1 421 aaPredicted RBP8.21□□□□□ -1.1
CDH8-210ENST00000583483 SPATA31C1P0DKV0 1188 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 ELNP15502 786 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 ERCC3P19447 782 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 IL6STP40189 918 aaPredicted RBP8.21□□□□□ -1.1
CDH8-210ENST00000583483 CHRNA4P43681 627 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 RAC1P63000 192 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 AIMP1Q12904 312 aaKnown RBP8.21□□□□□ -1.1
CDH8-210ENST00000583483 FOXD4L6Q3SYB3 417 aaPredicted RBP8.21□□□□□ -1.1
CDH8-210ENST00000583483 FOXD4L3Q6VB84 417 aaPredicted RBP8.21□□□□□ -1.1
CDH8-210ENST00000583483 PPP1R42Q7Z4L9 355 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 DNAJC10Q8IXB1 793 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 CCDC191Q8NCU4 936 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 KIF1BPQ96EK5 621 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 MYD88Q99836 296 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 ZNF576Q9H609 170 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 CWC25Q9NXE8 425 aaPredicted RBP8.21□□□□□ -1.1
CDH8-210ENST00000583483 BRWD3Q6RI45 1802 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 SPEF2Q9C093 1822 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 AFF2P51816 1311 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 MAP3K15Q6ZN16 1313 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 SALL3Q9BXA9 1300 aa8.21□□□□□ -1.1
CDH8-210ENST00000583483 C4AP0C0L4 1744 aa8.2□□□□□ -1.1
CDH8-210ENST00000583483 C4BP0C0L5 1744 aa8.2□□□□□ -1.1
CDH8-210ENST00000583483 SPDYE3A6NKU9 549 aa8.2□□□□□ -1.1
CDH8-210ENST00000583483 RNF225M0QZC1 329 aaPredicted RBP8.2□□□□□ -1.1
CDH8-210ENST00000583483 WISP1O95388 367 aa8.2□□□□□ -1.1
CDH8-210ENST00000583483 CYP19A1P11511 503 aaPredicted RBP8.2□□□□□ -1.1
CDH8-210ENST00000583483 ATP2B2Q01814 1243 aa8.2□□□□□ -1.1
CDH8-210ENST00000583483 PCDH1Q08174 1060 aa8.2□□□□□ -1.1
CDH8-210ENST00000583483 IKBKEQ14164 716 aa8.2□□□□□ -1.1
CDH8-210ENST00000583483 CWF19L2Q2TBE0 894 aaKnown RBP8.2□□□□□ -1.1
CDH8-210ENST00000583483 RABL6Q3YEC7 729 aaPredicted RBP8.2□□□□□ -1.1
CDH8-210ENST00000583483 PRRT3Q5FWE3 981 aa8.2□□□□□ -1.1
CDH8-210ENST00000583483 TTC22Q5TAA0 569 aa8.2□□□□□ -1.1
CDH8-210ENST00000583483 SLC7A3Q8WY07 619 aa8.2□□□□□ -1.1
CDH8-210ENST00000583483 CNTNAP4Q9C0A0 1308 aa8.2□□□□□ -1.1
CDH8-210ENST00000583483 USP42Q9H9J4 1324 aaKnown RBP8.2□□□□□ -1.1
CDH8-210ENST00000583483 ARAP2Q8WZ64 1704 aa8.2□□□□□ -1.1
CDH8-210ENST00000583483 ERVV-1B6SEH8 477 aa8.19□□□□□ -1.1
CDH8-210ENST00000583483 CDC45O75419 566 aa8.19□□□□□ -1.1
CDH8-210ENST00000583483 A1BGP04217 495 aa8.19□□□□□ -1.1
CDH8-210ENST00000583483 MX1P20591 662 aa8.19□□□□□ -1.1
CDH8-210ENST00000583483 HMGB2P26583 209 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms