RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 IL27Q8NEV9 243 aa14.82□□□□□ -0.04
TOP3A-215ENST00000583328 KANSL2Q9H9L4 492 aa14.82□□□□□ -0.04
TOP3A-215ENST00000583328 SPC25Q9HBM1 224 aa14.82□□□□□ -0.04
TOP3A-215ENST00000583328 GOPCQ9HD26 462 aa14.82□□□□□ -0.04
TOP3A-215ENST00000583328 IL1RAPL2Q9NP60 686 aa14.82□□□□□ -0.04
TOP3A-215ENST00000583328 ATP8A2Q9NTI2 1148 aa14.82□□□□□ -0.04
TOP3A-215ENST00000583328 MSRAQ9UJ68 235 aa14.82□□□□□ -0.04
TOP3A-215ENST00000583328 ZNF214Q9UL59 606 aaPredicted RBP14.82□□□□□ -0.04
TOP3A-215ENST00000583328 ELP1O95163 1332 aa14.82□□□□□ -0.04
TOP3A-215ENST00000583328 EYSQ5T1H1 3165 aa14.82□□□□□ -0.04
TOP3A-215ENST00000583328 TCRBV5S4A2TA0A5A2 114 aa14.81□□□□□ -0.04
TOP3A-215ENST00000583328 MYADML2A6NDP7 307 aa14.81□□□□□ -0.04
TOP3A-215ENST00000583328 APBB1O00213 710 aa14.81□□□□□ -0.04
TOP3A-215ENST00000583328 DUSP11O75319 330 aaKnown RBP14.81□□□□□ -0.04
TOP3A-215ENST00000583328 SNAI1O95863 264 aaPredicted RBP14.81□□□□□ -0.04
TOP3A-215ENST00000583328 C6orf222P0C671 652 aaPredicted RBP14.81□□□□□ -0.04
TOP3A-215ENST00000583328 SLC4A3P48751 1232 aa14.81□□□□□ -0.04
TOP3A-215ENST00000583328 CDK7P50613 346 aa14.81□□□□□ -0.04
TOP3A-215ENST00000583328 PSRC1Q6PGN9 363 aaPredicted RBP14.81□□□□□ -0.04
TOP3A-215ENST00000583328 ZNF365Q70YC5 407 aa14.81□□□□□ -0.04
TOP3A-215ENST00000583328 PCSK9Q8NBP7 692 aaKnown RBP14.81□□□□□ -0.04
TOP3A-215ENST00000583328 REPS2Q8NFH8 660 aa14.81□□□□□ -0.04
TOP3A-215ENST00000583328 ADAMTS19Q8TE59 1207 aa14.81□□□□□ -0.04
TOP3A-215ENST00000583328 UHRF1Q96T88 793 aaPredicted RBP14.81□□□□□ -0.04
TOP3A-215ENST00000583328 PPP1R12CQ9BZL4 782 aa14.81□□□□□ -0.04
TOP3A-215ENST00000583328 SYNGAP1Q96PV0 1343 aa14.81□□□□□ -0.04
TOP3A-215ENST00000583328 CYP2D7A0A087X1C5 515 aa14.8□□□□□ -0.04
TOP3A-215ENST00000583328 A0A0U1RQG5 324 aaPredicted RBP14.8□□□□□ -0.04
TOP3A-215ENST00000583328 USP17L12C9JPN9 530 aa14.8□□□□□ -0.04
TOP3A-215ENST00000583328 USP17L21D6R901 530 aa14.8□□□□□ -0.04
TOP3A-215ENST00000583328 SMIM22K7EJ46 135 aa14.8□□□□□ -0.04
TOP3A-215ENST00000583328 ARVCFO00192 962 aa14.8□□□□□ -0.04
TOP3A-215ENST00000583328 TLR3O15455 904 aaKnown RBP14.8□□□□□ -0.04
TOP3A-215ENST00000583328 MBD4O95243 580 aa14.8□□□□□ -0.04
TOP3A-215ENST00000583328 ASGR1P07306 291 aa14.8□□□□□ -0.04
TOP3A-215ENST00000583328 IRX5P78411 483 aaPredicted RBP14.8□□□□□ -0.04
TOP3A-215ENST00000583328 ACVR2BQ13705 512 aa14.8□□□□□ -0.04
TOP3A-215ENST00000583328 HSP90AB4PQ58FF6 505 aa14.8□□□□□ -0.04
TOP3A-215ENST00000583328 C12orf60Q5U649 245 aa14.8□□□□□ -0.04
TOP3A-215ENST00000583328 RASIP1Q5U651 963 aa14.8□□□□□ -0.04
TOP3A-215ENST00000583328 CEP85Q6P2H3 762 aa14.8□□□□□ -0.04
TOP3A-215ENST00000583328 C16orf86Q6ZW13 317 aa14.8□□□□□ -0.04
TOP3A-215ENST00000583328 RHPN1Q8TCX5 695 aa14.8□□□□□ -0.04
TOP3A-215ENST00000583328 DDRGK1Q96HY6 314 aa14.8□□□□□ -0.04
TOP3A-215ENST00000583328 TEX13BQ9BXU2 312 aa14.8□□□□□ -0.04
TOP3A-215ENST00000583328 BCL11AQ9H165 835 aa14.8□□□□□ -0.04
TOP3A-215ENST00000583328 CST5P28325 142 aaPredicted RBP14.79□□□□□ -0.04
TOP3A-215ENST00000583328 ADGRE1Q14246 886 aa14.79□□□□□ -0.04
TOP3A-215ENST00000583328 RAB30Q15771 203 aa14.79□□□□□ -0.04
TOP3A-215ENST00000583328 GNASQ5JWF2 1037 aa14.79□□□□□ -0.04
TOP3A-215ENST00000583328 SNRNP48Q6IEG0 339 aaKnown RBP14.79□□□□□ -0.04
TOP3A-215ENST00000583328 MAMDC4Q6UXC1 1216 aa14.79□□□□□ -0.04
TOP3A-215ENST00000583328 CLASRPQ8N2M8 674 aaKnown RBP14.79□□□□□ -0.04
TOP3A-215ENST00000583328 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.79□□□□□ -0.04
TOP3A-215ENST00000583328 SLF1Q9BQI6 1058 aa14.79□□□□□ -0.04
TOP3A-215ENST00000583328 MTIF3Q9H2K0 278 aaKnown RBP14.79□□□□□ -0.04
TOP3A-215ENST00000583328 CTDP1Q9Y5B0 961 aaPredicted RBP14.79□□□□□ -0.04
TOP3A-215ENST00000583328 CDH23Q9H251 3354 aa14.79□□□□□ -0.04
TOP3A-215ENST00000583328 A0A0G2JMZ2 1700 aa14.78□□□□□ -0.04
TOP3A-215ENST00000583328 IFIT2P09913 472 aaKnown RBP14.78□□□□□ -0.04
TOP3A-215ENST00000583328 GJA9P57773 515 aa14.78□□□□□ -0.04
TOP3A-215ENST00000583328 SLFNL1Q499Z3 407 aa14.78□□□□□ -0.04
TOP3A-215ENST00000583328 CPXCR1Q8N123 301 aa14.78□□□□□ -0.04
TOP3A-215ENST00000583328 TSPYL2Q9H2G4 693 aaPredicted RBP14.78□□□□□ -0.04
TOP3A-215ENST00000583328 NKX2-4Q9H2Z4 354 aa14.78□□□□□ -0.04
TOP3A-215ENST00000583328 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.78□□□□□ -0.04
TOP3A-215ENST00000583328 RIPK3Q9Y572 518 aa14.78□□□□□ -0.04
TOP3A-215ENST00000583328 DNAJC25-GNG10A0A024R161 153 aa14.77□□□□□ -0.05
TOP3A-215ENST00000583328 ZBED4O75132 1171 aa14.77□□□□□ -0.05
TOP3A-215ENST00000583328 FGBP02675 491 aa14.77□□□□□ -0.05
TOP3A-215ENST00000583328 RLBP1P12271 317 aa14.77□□□□□ -0.05
TOP3A-215ENST00000583328 CYP2C18P33260 490 aa14.77□□□□□ -0.05
TOP3A-215ENST00000583328 ADD2P35612 726 aa14.77□□□□□ -0.05
TOP3A-215ENST00000583328 CCDC144BQ3MJ40 725 aa14.77□□□□□ -0.05
TOP3A-215ENST00000583328 ZNF467Q7Z7K2 595 aaPredicted RBP14.77□□□□□ -0.05
TOP3A-215ENST00000583328 FAM126BQ8IXS8 530 aa14.77□□□□□ -0.05
TOP3A-215ENST00000583328 HERVK_113Q902F9 699 aa14.77□□□□□ -0.05
TOP3A-215ENST00000583328 FAM122AQ96E09 287 aa14.77□□□□□ -0.05
TOP3A-215ENST00000583328 NUP88Q99567 741 aaPredicted RBP14.77□□□□□ -0.05
TOP3A-215ENST00000583328 BOLA2Q9H3K6 86 aa14.77□□□□□ -0.05
TOP3A-215ENST00000583328 ABHD16BQ9H3Z7 469 aa14.77□□□□□ -0.05
TOP3A-215ENST00000583328 SLC28A3Q9HAS3 691 aa14.77□□□□□ -0.05
TOP3A-215ENST00000583328 IL23AQ9NPF7 189 aa14.77□□□□□ -0.05
TOP3A-215ENST00000583328 MYO9BQ13459 2157 aa14.77□□□□□ -0.05
TOP3A-215ENST00000583328 ANKRD35Q8N283 1001 aa14.76□□□□□ -0.05
TOP3A-215ENST00000583328 PRPF38AQ8NAV1 312 aaKnown RBP14.76□□□□□ -0.05
TOP3A-215ENST00000583328 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.76□□□□□ -0.05
TOP3A-215ENST00000583328 UPF3AQ9H1J1 476 aaKnown RBP14.76□□□□□ -0.05
TOP3A-215ENST00000583328 PAG1Q9NWQ8 432 aa14.76□□□□□ -0.05
TOP3A-215ENST00000583328 CXXC1Q9P0U4 656 aaPredicted RBP14.76□□□□□ -0.05
TOP3A-215ENST00000583328 SLC4A4Q9Y6R1 1079 aa14.76□□□□□ -0.05
TOP3A-215ENST00000583328 ZNFX1Q9P2E3 1918 aaKnown RBP14.76□□□□□ -0.05
TOP3A-215ENST00000583328 NAV1Q8NEY1 1877 aa14.76□□□□□ -0.05
TOP3A-215ENST00000583328 F5H6K3 240 aa14.75□□□□□ -0.05
TOP3A-215ENST00000583328 ADCY6O43306 1168 aa14.75□□□□□ -0.05
TOP3A-215ENST00000583328 PLA2G5P39877 138 aa14.75□□□□□ -0.05
TOP3A-215ENST00000583328 KLRC3Q07444 240 aa14.75□□□□□ -0.05
TOP3A-215ENST00000583328 CTR9Q6PD62 1173 aa14.75□□□□□ -0.05
TOP3A-215ENST00000583328 NOL8Q76FK4 1167 aaKnown RBP14.75□□□□□ -0.05
TOP3A-215ENST00000583328 ARMCX2Q7L311 632 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms