RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 ZNF536O15090 1300 aa19.23■□□□□ 0.67
RNF43-206ENST00000582293 WDR19Q8NEZ3 1342 aa19.23■□□□□ 0.67
RNF43-206ENST00000582293 FMNL1O95466 1100 aaPredicted RBP19.22■□□□□ 0.67
RNF43-206ENST00000582293 FCGRTP55899 365 aa19.22■□□□□ 0.67
RNF43-206ENST00000582293 SNAP25P60880 206 aa19.22■□□□□ 0.67
RNF43-206ENST00000582293 SLC35G1Q2M3R5 365 aa19.22■□□□□ 0.67
RNF43-206ENST00000582293 FAM160B2Q86V87 743 aa19.22■□□□□ 0.67
RNF43-206ENST00000582293 STAG2Q8N3U4 1231 aa19.22■□□□□ 0.67
RNF43-206ENST00000582293 DOCK3Q8IZD9 2030 aa19.22■□□□□ 0.67
RNF43-206ENST00000582293 LIFRP42702 1097 aa19.21■□□□□ 0.67
RNF43-206ENST00000582293 KIF22Q14807 665 aa19.21■□□□□ 0.67
RNF43-206ENST00000582293 SART3Q15020 963 aaKnown RBP19.21■□□□□ 0.67
RNF43-206ENST00000582293 CHURC1Q8WUH1 139 aa19.21■□□□□ 0.67
RNF43-206ENST00000582293 SRRDQ9UH36 339 aa19.21■□□□□ 0.67
RNF43-206ENST00000582293 MAD2L2Q9UI95 211 aa19.21■□□□□ 0.67
RNF43-206ENST00000582293 GJD2Q9UKL4 321 aa19.21■□□□□ 0.67
RNF43-206ENST00000582293 PTPN22Q9Y2R2 807 aa19.21■□□□□ 0.67
RNF43-206ENST00000582293 ERICH2A1L162 156 aa19.2■□□□□ 0.66
RNF43-206ENST00000582293 PALM3A6NDB9 673 aaPredicted RBP19.2■□□□□ 0.66
RNF43-206ENST00000582293 TNPO2O14787 897 aaKnown RBP19.2■□□□□ 0.66
RNF43-206ENST00000582293 ATP2A1O14983 1001 aa19.2■□□□□ 0.66
RNF43-206ENST00000582293 PRKCZQ05513 592 aa19.2■□□□□ 0.66
RNF43-206ENST00000582293 GRM4Q14833 912 aa19.2■□□□□ 0.66
RNF43-206ENST00000582293 SYDE2Q5VT97 1194 aa19.2■□□□□ 0.66
RNF43-206ENST00000582293 GPR142Q7Z601 462 aa19.2■□□□□ 0.66
RNF43-206ENST00000582293 IL17RAQ96F46 866 aa19.2■□□□□ 0.66
RNF43-206ENST00000582293 MYL10Q9BUA6 226 aa19.2■□□□□ 0.66
RNF43-206ENST00000582293 UBA5Q9GZZ9 404 aa19.2■□□□□ 0.66
RNF43-206ENST00000582293 RANBP17Q9H2T7 1088 aaKnown RBP19.2■□□□□ 0.66
RNF43-206ENST00000582293 ISY1Q9ULR0 285 aaKnown RBP19.2■□□□□ 0.66
RNF43-206ENST00000582293 RIPK3Q9Y572 518 aa19.2■□□□□ 0.66
RNF43-206ENST00000582293 GNRH1P01148 92 aa19.19■□□□□ 0.66
RNF43-206ENST00000582293 TAL1P17542 331 aaPredicted RBP19.19■□□□□ 0.66
RNF43-206ENST00000582293 ERCC3P19447 782 aa19.19■□□□□ 0.66
RNF43-206ENST00000582293 RPS6KB1P23443 525 aa19.19■□□□□ 0.66
RNF43-206ENST00000582293 MAPK4P31152 587 aa19.19■□□□□ 0.66
RNF43-206ENST00000582293 ASPRV1Q53RT3 343 aa19.19■□□□□ 0.66
RNF43-206ENST00000582293 GPATCH4Q5T3I0 446 aaKnown RBP19.19■□□□□ 0.66
RNF43-206ENST00000582293 SGMS1Q86VZ5 419 aa19.19■□□□□ 0.66
RNF43-206ENST00000582293 RIOX2Q8IUF8 465 aa19.19■□□□□ 0.66
RNF43-206ENST00000582293 ZNF654Q8IZM8 581 aa19.19■□□□□ 0.66
RNF43-206ENST00000582293 SHCBP1Q8NEM2 672 aa19.19■□□□□ 0.66
RNF43-206ENST00000582293 USP6NLQ92738 828 aa19.19■□□□□ 0.66
RNF43-206ENST00000582293 RAVER2Q9HCJ3 691 aaKnown RBP19.19■□□□□ 0.66
RNF43-206ENST00000582293 ZSWIM6Q9HCJ5 1215 aa19.19■□□□□ 0.66
RNF43-206ENST00000582293 BRPF3Q9ULD4 1205 aa19.19■□□□□ 0.66
RNF43-206ENST00000582293 PTCH2Q9Y6C5 1203 aa19.19■□□□□ 0.66
RNF43-206ENST00000582293 ZBED4O75132 1171 aa19.18■□□□□ 0.66
RNF43-206ENST00000582293 HMGB1P09429 215 aaKnown RBP19.18■□□□□ 0.66
RNF43-206ENST00000582293 PARP1P09874 1014 aaKnown RBP19.18■□□□□ 0.66
RNF43-206ENST00000582293 CASTP20810 708 aaKnown RBP19.18■□□□□ 0.66
RNF43-206ENST00000582293 STAT3P40763 770 aa19.18■□□□□ 0.66
RNF43-206ENST00000582293 CCNA1P78396 465 aa19.18■□□□□ 0.66
RNF43-206ENST00000582293 IKQ13123 557 aaPredicted RBP19.18■□□□□ 0.66
RNF43-206ENST00000582293 PLS1Q14651 629 aa19.18■□□□□ 0.66
RNF43-206ENST00000582293 MORN1Q5T089 497 aa19.18■□□□□ 0.66
RNF43-206ENST00000582293 FBXO46Q6PJ61 603 aaPredicted RBP19.18■□□□□ 0.66
RNF43-206ENST00000582293 BLOC1S2Q6QNY1 142 aa19.18■□□□□ 0.66
RNF43-206ENST00000582293 AGXT2Q9BYV1 514 aa19.18■□□□□ 0.66
RNF43-206ENST00000582293 TM6SF1Q9BZW5 370 aa19.18■□□□□ 0.66
RNF43-206ENST00000582293 ZNF236Q9UL36 1845 aa19.17■□□□□ 0.66
RNF43-206ENST00000582293 FLT3LGP49771 235 aa19.17■□□□□ 0.66
RNF43-206ENST00000582293 OAZ1P54368 228 aa19.17■□□□□ 0.66
RNF43-206ENST00000582293 PKN2Q16513 984 aaKnown RBP19.17■□□□□ 0.66
RNF43-206ENST00000582293 SNRNP48Q6IEG0 339 aaKnown RBP19.17■□□□□ 0.66
RNF43-206ENST00000582293 PLEKHH3Q7Z736 793 aa19.17■□□□□ 0.66
RNF43-206ENST00000582293 CATIPQ7Z7H3 387 aa19.17■□□□□ 0.66
RNF43-206ENST00000582293 NBPF11Q86T75 865 aa19.17■□□□□ 0.66
RNF43-206ENST00000582293 RAB11FIP4Q86YS3 637 aa19.17■□□□□ 0.66
RNF43-206ENST00000582293 CPXCR1Q8N123 301 aa19.17■□□□□ 0.66
RNF43-206ENST00000582293 FBXL16Q8N461 479 aa19.17■□□□□ 0.66
RNF43-206ENST00000582293 AGBL1Q96MI9 1066 aa19.17■□□□□ 0.66
RNF43-206ENST00000582293 TEX13BQ9BXU2 312 aa19.17■□□□□ 0.66
RNF43-206ENST00000582293 DDAH1O94760 285 aa19.16■□□□□ 0.66
RNF43-206ENST00000582293 FDX1P10109 184 aa19.16■□□□□ 0.66
RNF43-206ENST00000582293 RXRAP19793 462 aa19.16■□□□□ 0.66
RNF43-206ENST00000582293 PTPREP23469 700 aa19.16■□□□□ 0.66
RNF43-206ENST00000582293 PRMT2P55345 433 aa19.16■□□□□ 0.66
RNF43-206ENST00000582293 GRB14Q14449 540 aa19.16■□□□□ 0.66
RNF43-206ENST00000582293 ARHGEF6Q15052 776 aa19.16■□□□□ 0.66
RNF43-206ENST00000582293 CCDC174Q6PII3 467 aa19.16■□□□□ 0.66
RNF43-206ENST00000582293 Q6ZUG5 572 aa19.16■□□□□ 0.66
RNF43-206ENST00000582293 RUFY3Q7L099 469 aa19.16■□□□□ 0.66
RNF43-206ENST00000582293 ADGRF4Q8IZF3 695 aa19.16■□□□□ 0.66
RNF43-206ENST00000582293 TMTC2Q8N394 836 aa19.16■□□□□ 0.66
RNF43-206ENST00000582293 COA7Q96BR5 231 aa19.16■□□□□ 0.66
RNF43-206ENST00000582293 MAP3K14Q99558 947 aa19.16■□□□□ 0.66
RNF43-206ENST00000582293 UPF3BQ9BZI7 483 aaKnown RBP19.16■□□□□ 0.66
RNF43-206ENST00000582293 SMCHD1A6NHR9 2005 aa19.16■□□□□ 0.66
RNF43-206ENST00000582293 KLRF2D3W0D1 207 aa19.15■□□□□ 0.66
RNF43-206ENST00000582293 CYTH3O43739 400 aa19.15■□□□□ 0.66
RNF43-206ENST00000582293 SLC25A27O95847 323 aa19.15■□□□□ 0.66
RNF43-206ENST00000582293 PSMA5P28066 241 aa19.15■□□□□ 0.66
RNF43-206ENST00000582293 ANAPC15P60006 121 aa19.15■□□□□ 0.66
RNF43-206ENST00000582293 IRF5Q13568 498 aa19.15■□□□□ 0.66
RNF43-206ENST00000582293 APOA5Q6Q788 366 aa19.15■□□□□ 0.66
RNF43-206ENST00000582293 NFXL1Q6ZNB6 911 aa19.15■□□□□ 0.66
RNF43-206ENST00000582293 NCAPG2Q86XI2 1143 aa19.15■□□□□ 0.66
RNF43-206ENST00000582293 NUP133Q8WUM0 1156 aa19.15■□□□□ 0.66
RNF43-206ENST00000582293 MTMR8Q96EF0 704 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms