RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 STAG1Q8WVM7 1258 aa14.88□□□□□ -0.03
CDK5RAP3-222ENST00000581708 TTC14Q96N46 770 aa14.88□□□□□ -0.03
CDK5RAP3-222ENST00000581708 NUP88Q99567 741 aaPredicted RBP14.88□□□□□ -0.03
CDK5RAP3-222ENST00000581708 NBPF3Q9H094 633 aa14.88□□□□□ -0.03
CDK5RAP3-222ENST00000581708 SLC38A10Q9HBR0 1119 aa14.88□□□□□ -0.03
CDK5RAP3-222ENST00000581708 IL17RBQ9NRM6 502 aa14.88□□□□□ -0.03
CDK5RAP3-222ENST00000581708 FBXO40Q9UH90 709 aa14.88□□□□□ -0.03
CDK5RAP3-222ENST00000581708 CTNNA3Q9UI47 895 aa14.88□□□□□ -0.03
CDK5RAP3-222ENST00000581708 CTDP1Q9Y5B0 961 aaPredicted RBP14.88□□□□□ -0.03
CDK5RAP3-222ENST00000581708 NR2E3Q9Y5X4 410 aa14.88□□□□□ -0.03
CDK5RAP3-222ENST00000581708 ZNF213O14771 459 aa14.87□□□□□ -0.03
CDK5RAP3-222ENST00000581708 SLC1A4P43007 532 aa14.87□□□□□ -0.03
CDK5RAP3-222ENST00000581708 STAT2P52630 851 aa14.87□□□□□ -0.03
CDK5RAP3-222ENST00000581708 CCDC178Q5BJE1 867 aa14.87□□□□□ -0.03
CDK5RAP3-222ENST00000581708 TTC22Q5TAA0 569 aa14.87□□□□□ -0.03
CDK5RAP3-222ENST00000581708 LHX8Q68G74 356 aa14.87□□□□□ -0.03
CDK5RAP3-222ENST00000581708 LRRC47Q8N1G4 583 aaKnown RBP14.87□□□□□ -0.03
CDK5RAP3-222ENST00000581708 MSL3Q8N5Y2 521 aaKnown RBP14.87□□□□□ -0.03
CDK5RAP3-222ENST00000581708 MMP19Q99542 508 aa14.87□□□□□ -0.03
CDK5RAP3-222ENST00000581708 RAD50Q92878 1312 aa14.87□□□□□ -0.03
CDK5RAP3-222ENST00000581708 COBLO75128 1261 aa14.86□□□□□ -0.03
CDK5RAP3-222ENST00000581708 TOP1P11387 765 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-222ENST00000581708 PDE4AP27815 886 aa14.86□□□□□ -0.03
CDK5RAP3-222ENST00000581708 SNRNP48Q6IEG0 339 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-222ENST00000581708 SAMD1Q6SPF0 538 aaPredicted RBP14.86□□□□□ -0.03
CDK5RAP3-222ENST00000581708 CHST13Q8NET6 341 aa14.86□□□□□ -0.03
CDK5RAP3-222ENST00000581708 DCAF4Q8WV16 495 aa14.86□□□□□ -0.03
CDK5RAP3-222ENST00000581708 RUFY2Q8WXA3 655 aa14.86□□□□□ -0.03
CDK5RAP3-222ENST00000581708 ESR2Q92731 530 aa14.86□□□□□ -0.03
CDK5RAP3-222ENST00000581708 DPF3Q92784 378 aa14.86□□□□□ -0.03
CDK5RAP3-222ENST00000581708 PAWRQ96IZ0 340 aaKnown RBP14.86□□□□□ -0.03
CDK5RAP3-222ENST00000581708 FLRT1Q9NZU1 646 aa14.86□□□□□ -0.03
CDK5RAP3-222ENST00000581708 PNMA2Q9UL42 364 aa14.86□□□□□ -0.03
CDK5RAP3-222ENST00000581708 CYBAP13498 195 aa14.85□□□□□ -0.03
CDK5RAP3-222ENST00000581708 IMMTQ16891 758 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-222ENST00000581708 TKFCQ3LXA3 575 aa14.85□□□□□ -0.03
CDK5RAP3-222ENST00000581708 KIFC2Q96AC6 838 aa14.85□□□□□ -0.03
CDK5RAP3-222ENST00000581708 MAML3Q96JK9 1138 aa14.85□□□□□ -0.03
CDK5RAP3-222ENST00000581708 TOMM22Q9NS69 142 aa14.85□□□□□ -0.03
CDK5RAP3-222ENST00000581708 DDX20Q9UHI6 824 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-222ENST00000581708 ZNFX1Q9P2E3 1918 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-222ENST00000581708 TMEM232C9JQI7 657 aa14.84□□□□□ -0.03
CDK5RAP3-222ENST00000581708 MCCP23508 829 aa14.84□□□□□ -0.03
CDK5RAP3-222ENST00000581708 CCND3P30281 292 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-222ENST00000581708 CYP2C19P33261 490 aa14.84□□□□□ -0.03
CDK5RAP3-222ENST00000581708 IRX6P78412 446 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-222ENST00000581708 ZNF792Q3KQV3 632 aa14.84□□□□□ -0.03
CDK5RAP3-222ENST00000581708 ZNF467Q7Z7K2 595 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-222ENST00000581708 DGKHQ86XP1 1220 aa14.84□□□□□ -0.03
CDK5RAP3-222ENST00000581708 C11orf49Q9H6J7 331 aa14.84□□□□□ -0.03
CDK5RAP3-222ENST00000581708 INCENPQ9NQS7 918 aa14.84□□□□□ -0.03
CDK5RAP3-222ENST00000581708 TACC3Q9Y6A5 838 aa14.84□□□□□ -0.03
CDK5RAP3-222ENST00000581708 LAMA4Q16363 1823 aa14.84□□□□□ -0.03
CDK5RAP3-222ENST00000581708 DNAJC25-GNG10A0A024R161 153 aa14.83□□□□□ -0.04
CDK5RAP3-222ENST00000581708 SEPT4O43236 478 aa14.83□□□□□ -0.04
CDK5RAP3-222ENST00000581708 NMT2O60551 498 aa14.83□□□□□ -0.04
CDK5RAP3-222ENST00000581708 GSPT1P15170 499 aaKnown RBP14.83□□□□□ -0.04
CDK5RAP3-222ENST00000581708 MNX1P50219 401 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-222ENST00000581708 HAND2P61296 217 aa14.83□□□□□ -0.04
CDK5RAP3-222ENST00000581708 RRP12Q5JTH9 1297 aaKnown RBP14.83□□□□□ -0.04
CDK5RAP3-222ENST00000581708 BTNL9Q6UXG8 535 aa14.83□□□□□ -0.04
CDK5RAP3-222ENST00000581708 IQCA1Q86XH1 822 aa14.83□□□□□ -0.04
CDK5RAP3-222ENST00000581708 DDX11Q96FC9 970 aa14.83□□□□□ -0.04
CDK5RAP3-222ENST00000581708 TINF2Q9BSI4 451 aa14.83□□□□□ -0.04
CDK5RAP3-222ENST00000581708 CNNM2Q9H8M5 875 aa14.83□□□□□ -0.04
CDK5RAP3-222ENST00000581708 EVI5O60447 810 aa14.82□□□□□ -0.04
CDK5RAP3-222ENST00000581708 COL6A1P12109 1028 aa14.82□□□□□ -0.04
CDK5RAP3-222ENST00000581708 IKQ13123 557 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-222ENST00000581708 MAMDC4Q6UXC1 1216 aa14.82□□□□□ -0.04
CDK5RAP3-222ENST00000581708 TBC1D10CQ8IV04 446 aa14.82□□□□□ -0.04
CDK5RAP3-222ENST00000581708 CPXCR1Q8N123 301 aa14.82□□□□□ -0.04
CDK5RAP3-222ENST00000581708 ARRDC4Q8NCT1 418 aa14.82□□□□□ -0.04
CDK5RAP3-222ENST00000581708 ANKS1AQ92625 1134 aa14.82□□□□□ -0.04
CDK5RAP3-222ENST00000581708 TMEM47Q9BQJ4 181 aa14.82□□□□□ -0.04
CDK5RAP3-222ENST00000581708 KRT23Q9C075 422 aa14.82□□□□□ -0.04
CDK5RAP3-222ENST00000581708 RAVER2Q9HCJ3 691 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-222ENST00000581708 SYNGAP1Q96PV0 1343 aa14.82□□□□□ -0.04
CDK5RAP3-222ENST00000581708 PLXNA1Q9UIW2 1896 aa14.81□□□□□ -0.04
CDK5RAP3-222ENST00000581708 H0YGN5 161 aa14.81□□□□□ -0.04
CDK5RAP3-222ENST00000581708 DNM1LO00429 736 aa14.81□□□□□ -0.04
CDK5RAP3-222ENST00000581708 CNGA1P29973 690 aa14.81□□□□□ -0.04
CDK5RAP3-222ENST00000581708 TRPV1Q8NER1 839 aa14.81□□□□□ -0.04
CDK5RAP3-222ENST00000581708 ACAD9Q9H845 621 aa14.81□□□□□ -0.04
CDK5RAP3-222ENST00000581708 PRR12Q9ULL5 1215 aa14.81□□□□□ -0.04
CDK5RAP3-222ENST00000581708 ISY1Q9ULR0 285 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-222ENST00000581708 RIPK3Q9Y572 518 aa14.81□□□□□ -0.04
CDK5RAP3-222ENST00000581708 FRMPD3Q5JV73 1810 aa14.8□□□□□ -0.04
CDK5RAP3-222ENST00000581708 SNHG28P0DPA3 235 aa14.8□□□□□ -0.04
CDK5RAP3-222ENST00000581708 CHMLP26374 656 aa14.8□□□□□ -0.04
CDK5RAP3-222ENST00000581708 CCDC96Q2M329 555 aa14.8□□□□□ -0.04
CDK5RAP3-222ENST00000581708 GPATCH4Q5T3I0 446 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-222ENST00000581708 ANKRD35Q8N283 1001 aa14.8□□□□□ -0.04
CDK5RAP3-222ENST00000581708 DIS3LQ8TF46 1054 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-222ENST00000581708 MAF1Q9H063 256 aa14.8□□□□□ -0.04
CDK5RAP3-222ENST00000581708 CNPY2Q9Y2B0 182 aa14.8□□□□□ -0.04
CDK5RAP3-222ENST00000581708 PFASO15067 1338 aa14.8□□□□□ -0.04
CDK5RAP3-222ENST00000581708 ZNF536O15090 1300 aa14.8□□□□□ -0.04
CDK5RAP3-222ENST00000581708 ICAM1P05362 532 aa14.79□□□□□ -0.04
CDK5RAP3-222ENST00000581708 PGK2P07205 417 aa14.79□□□□□ -0.04
CDK5RAP3-222ENST00000581708 PDHBP11177 359 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms