RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ZNRF3Q9ULT6 936 aa7.23□□□□□ -1.25
SMCHD1-205ENST00000581383 PRR36Q9H6K5 1346 aa7.23□□□□□ -1.25
SMCHD1-205ENST00000581383 NUAK1O60285 661 aa7.22□□□□□ -1.25
SMCHD1-205ENST00000581383 SRFP11831 508 aa7.22□□□□□ -1.25
SMCHD1-205ENST00000581383 RBL2Q08999 1139 aa7.22□□□□□ -1.25
SMCHD1-205ENST00000581383 NMIQ13287 307 aaPredicted RBP7.22□□□□□ -1.25
SMCHD1-205ENST00000581383 KCNA10Q16322 511 aa7.22□□□□□ -1.25
SMCHD1-205ENST00000581383 WAPLQ7Z5K2 1190 aa7.22□□□□□ -1.25
SMCHD1-205ENST00000581383 SIRT2Q8IXJ6 389 aa7.22□□□□□ -1.25
SMCHD1-205ENST00000581383 ANKS4BQ8N8V4 417 aa7.22□□□□□ -1.25
SMCHD1-205ENST00000581383 ARMC5Q96C12 935 aa7.22□□□□□ -1.25
SMCHD1-205ENST00000581383 SHDQ96IW2 340 aa7.22□□□□□ -1.25
SMCHD1-205ENST00000581383 ANTXR1Q9H6X2 564 aa7.22□□□□□ -1.25
SMCHD1-205ENST00000581383 ETV2O00321 342 aaPredicted RBP7.21□□□□□ -1.26
SMCHD1-205ENST00000581383 IMPDH2P12268 514 aa7.21□□□□□ -1.26
SMCHD1-205ENST00000581383 PCBP3P57721 371 aaKnown RBP7.21□□□□□ -1.26
SMCHD1-205ENST00000581383 PMFBP1Q8TBY8 1022 aa7.21□□□□□ -1.26
SMCHD1-205ENST00000581383 HIRIP3Q9BW71 556 aaPredicted RBP7.21□□□□□ -1.26
SMCHD1-205ENST00000581383 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.21□□□□□ -1.26
SMCHD1-205ENST00000581383 GIPRP48546 466 aa7.2□□□□□ -1.26
SMCHD1-205ENST00000581383 FAM169BQ8N8A8 192 aa7.2□□□□□ -1.26
SMCHD1-205ENST00000581383 SMG5Q9UPR3 1016 aaKnown RBP7.2□□□□□ -1.26
SMCHD1-205ENST00000581383 SHISA3A0PJX4 238 aa7.19□□□□□ -1.26
SMCHD1-205ENST00000581383 RGS13O14921 159 aa7.19□□□□□ -1.26
SMCHD1-205ENST00000581383 SMAD7O15105 426 aaKnown RBP7.19□□□□□ -1.26
SMCHD1-205ENST00000581383 FKTNO75072 461 aa7.19□□□□□ -1.26
SMCHD1-205ENST00000581383 RNF111Q6ZNA4 994 aa7.19□□□□□ -1.26
SMCHD1-205ENST00000581383 RUFY4Q6ZNE9 571 aa7.19□□□□□ -1.26
SMCHD1-205ENST00000581383 ANKS3Q6ZW76 656 aa7.19□□□□□ -1.26
SMCHD1-205ENST00000581383 LSRQ86X29 649 aaPredicted RBP7.19□□□□□ -1.26
SMCHD1-205ENST00000581383 IRF2BP1Q8IU81 584 aa7.19□□□□□ -1.26
SMCHD1-205ENST00000581383 CKAP2LQ8IYA6 745 aa7.19□□□□□ -1.26
SMCHD1-205ENST00000581383 ENOX1Q8TC92 643 aaKnown RBP7.19□□□□□ -1.26
SMCHD1-205ENST00000581383 INTS4Q96HW7 963 aaKnown RBP7.19□□□□□ -1.26
SMCHD1-205ENST00000581383 GMIPQ9P107 970 aa7.19□□□□□ -1.26
SMCHD1-205ENST00000581383 SLC22A31A6NKX4 558 aa7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 DNAJA2O60884 412 aa7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 CLEC3AO75596 197 aa7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 GLDCP23378 1020 aa7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 SNX17Q15036 470 aa7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 LRRFIP1Q32MZ4 808 aaKnown RBP7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 ADGRF1Q5T601 910 aa7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 DPH6Q7L8W6 267 aa7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 SIAH1Q8IUQ4 282 aa7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 RBBP8NLQ8NC74 664 aaPredicted RBP7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 KRTAP9-8Q9BYQ0 159 aa7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 FOXP3Q9BZS1 431 aa7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 LNPKQ9C0E8 428 aa7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 MKRN2Q9H000 416 aaKnown RBP7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 IRF2BPLQ9H1B7 796 aa7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 PRKAG3Q9UGI9 489 aa7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 FBXL21Q9UKT6 434 aa7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 TCFL5Q9UL49 500 aa7.18□□□□□ -1.26
SMCHD1-205ENST00000581383 MEIS1O00470 390 aa7.17□□□□□ -1.26
SMCHD1-205ENST00000581383 SYPP08247 313 aa7.17□□□□□ -1.26
SMCHD1-205ENST00000581383 GALK1P51570 392 aa7.17□□□□□ -1.26
SMCHD1-205ENST00000581383 TEKQ02763 1124 aa7.17□□□□□ -1.26
SMCHD1-205ENST00000581383 PPP2R5EQ16537 467 aa7.17□□□□□ -1.26
SMCHD1-205ENST00000581383 TIGD5Q53EQ6 642 aa7.17□□□□□ -1.26
SMCHD1-205ENST00000581383 SOGA3Q5TF21 947 aa7.17□□□□□ -1.26
SMCHD1-205ENST00000581383 CEP128Q6ZU80 1094 aa7.17□□□□□ -1.26
SMCHD1-205ENST00000581383 OR6P1Q8NGX9 317 aa7.17□□□□□ -1.26
SMCHD1-205ENST00000581383 HNRNPLLQ8WVV9 542 aaKnown RBP7.17□□□□□ -1.26
SMCHD1-205ENST00000581383 YBX2Q9Y2T7 364 aaKnown RBP7.17□□□□□ -1.26
SMCHD1-205ENST00000581383 R3HCC1Q9Y3T6 440 aaKnown RBP7.17□□□□□ -1.26
SMCHD1-205ENST00000581383 LOC105371045A0A1W2PR82 267 aa7.16□□□□□ -1.26
SMCHD1-205ENST00000581383 OR14I1A6ND48 311 aa7.16□□□□□ -1.26
SMCHD1-205ENST00000581383 PSPNO60542 156 aa7.16□□□□□ -1.26
SMCHD1-205ENST00000581383 USP2O75604 605 aaPredicted RBP7.16□□□□□ -1.26
SMCHD1-205ENST00000581383 LINC00310P59036 64 aa7.16□□□□□ -1.26
SMCHD1-205ENST00000581383 NR0B2Q15466 257 aa7.16□□□□□ -1.26
SMCHD1-205ENST00000581383 TNNI3KQ59H18 835 aa7.16□□□□□ -1.26
SMCHD1-205ENST00000581383 OVOS1Q6IE37 1185 aa7.16□□□□□ -1.26
SMCHD1-205ENST00000581383 ZNF655Q8N720 491 aaPredicted RBP7.16□□□□□ -1.26
SMCHD1-205ENST00000581383 SYTL5Q8TDW5 730 aaPredicted RBP7.16□□□□□ -1.26
SMCHD1-205ENST00000581383 ATG4CQ96DT6 458 aa7.16□□□□□ -1.26
SMCHD1-205ENST00000581383 TCTN2Q96GX1 697 aa7.16□□□□□ -1.26
SMCHD1-205ENST00000581383 ZNF512BQ96KM6 892 aaPredicted RBP7.16□□□□□ -1.26
SMCHD1-205ENST00000581383 SIRT5Q9NXA8 310 aa7.16□□□□□ -1.26
SMCHD1-205ENST00000581383 CNOT6Q9ULM6 557 aaKnown RBP7.16□□□□□ -1.26
SMCHD1-205ENST00000581383 MEIS3P2A8K0S8 358 aa7.15□□□□□ -1.26
SMCHD1-205ENST00000581383 KLF4O43474 513 aa7.15□□□□□ -1.26
SMCHD1-205ENST00000581383 POLR2BP30876 1174 aaKnown RBP7.15□□□□□ -1.26
SMCHD1-205ENST00000581383 CCDC144BQ3MJ40 725 aa7.15□□□□□ -1.26
SMCHD1-205ENST00000581383 LCNL1Q6ZST4 164 aa7.15□□□□□ -1.26
SMCHD1-205ENST00000581383 NLRC3Q7RTR2 1065 aa7.15□□□□□ -1.26
SMCHD1-205ENST00000581383 TMC3Q7Z5M5 1100 aa7.15□□□□□ -1.26
SMCHD1-205ENST00000581383 DAGLBQ8NCG7 672 aa7.15□□□□□ -1.26
SMCHD1-205ENST00000581383 TM9SF2Q99805 663 aa7.15□□□□□ -1.26
SMCHD1-205ENST00000581383 TRIM55Q9BYV6 548 aa7.15□□□□□ -1.26
SMCHD1-205ENST00000581383 CD320Q9NPF0 282 aa7.15□□□□□ -1.26
SMCHD1-205ENST00000581383 A0A1W2PQ27 194 aa7.14□□□□□ -1.27
SMCHD1-205ENST00000581383 A0A1W2PQ64 194 aa7.14□□□□□ -1.27
SMCHD1-205ENST00000581383 A0A1W2PQC6 194 aa7.14□□□□□ -1.27
SMCHD1-205ENST00000581383 A0A1W2PQD8 194 aa7.14□□□□□ -1.27
SMCHD1-205ENST00000581383 RFXAPO00287 272 aa7.14□□□□□ -1.27
SMCHD1-205ENST00000581383 SEMA7AO75326 666 aa7.14□□□□□ -1.27
SMCHD1-205ENST00000581383 UBOX5O94941 541 aa7.14□□□□□ -1.27
SMCHD1-205ENST00000581383 MED14OSP0DP75 135 aa7.14□□□□□ -1.27
SMCHD1-205ENST00000581383 DLG4P78352 724 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms