RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 WNK4Q96J92 1243 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 SPATA32Q96LK8 384 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 FEZ1Q99689 392 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 LZTS2Q9BRK4 669 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 GOLPH3LQ9H4A5 285 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 ZSCAN16Q9H4T2 348 aaPredicted RBP7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 VCPKMTQ9H867 229 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 ARHGEF10LQ9HCE6 1279 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 EMILIN3Q9NT22 766 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 BARHL2Q9NY43 387 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 PCDHB6Q9Y5E3 794 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 SNCAIPQ9Y6H5 919 aa7.09□□□□□ -1.27
RNU4ATAC-201ENST00000580972 PITPNM2Q9BZ72 1349 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PEX10O60683 326 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ASNSP08243 561 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 MARCKSP29966 332 aaPredicted RBP7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PTPAQ15257 358 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SF3A1Q15459 793 aaKnown RBP7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 USH1GQ495M9 461 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 JAKMIP3Q5VZ66 844 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ANO1Q5XXA6 986 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 CAVIN1Q6NZI2 390 aaKnown RBP7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PIK3AP1Q6ZUJ8 805 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 USP50Q70EL3 339 aaPredicted RBP7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 BRAPQ7Z569 592 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 BLIDQ8IZY5 108 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 KIFC2Q96AC6 838 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 P2RX7Q99572 595 aaKnown RBP7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ZNF408Q9H9D4 720 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ELP3Q9H9T3 547 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 TMEM63CQ9P1W3 806 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PRR12Q9ULL5 1215 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PCDHA6Q9UN73 950 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 CLEC11AQ9Y240 323 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PCDHA8Q9Y5H6 950 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PPP2R3BQ9Y5P8 575 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 DDX49Q9Y6V7 483 aaKnown RBP7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ZHX2Q9Y6X8 837 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ARFGEF1Q9Y6D6 1849 aa7.08□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PNMA6FA0A0J9YX94 578 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SMCO2A6NFE2 343 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 GOLGA6L22H0YM25 854 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 M0R2N6 131 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 OPLAHO14841 1288 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ZBTB5O15062 677 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 EDIL3O43854 480 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 VCAM1P19320 739 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 GJA5P36382 358 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 NASPP49321 788 aaPredicted RBP7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 HMGCS2P54868 508 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 MAP3K9P80192 1104 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 TTLL12Q14166 644 aaPredicted RBP7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 STK38Q15208 465 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SAFBQ15424 915 aaKnown RBP eCLIP7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ZNF174Q15697 407 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PPP4R3BQ5MIZ7 849 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 NOL9Q5SY16 702 aaKnown RBP7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 GPATCH4Q5T3I0 446 aaKnown RBP7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 BTNL9Q6UXG8 535 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 LINC00301Q8NCQ3 95 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ZNF396Q96N95 335 aaPredicted RBP7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 CLIC6Q96NY7 704 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 UIMC1Q96RL1 719 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 KIAA1683Q9H0B3 1180 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 FOXP1Q9H334 677 aaPredicted RBP7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 RPAP3Q9H6T3 665 aaPredicted RBP7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 GOPCQ9HD26 462 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PICK1Q9NRD5 415 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 RTEL1Q9NZ71 1219 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 BIN2Q9UBW5 565 aaPredicted RBP7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SEC63Q9UGP8 760 aaKnown RBP7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 RCOR1Q9UKL0 485 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PCDHA7Q9UN72 937 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PCDHA4Q9UN74 947 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ATP6V1DQ9Y5K8 247 aa7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 GOLGB1Q14789 3259 aaKnown RBP7.07□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PSME4Q14997 1843 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ZC3H4Q9UPT8 1303 aaKnown RBP7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 USP17L15C9J2P7 530 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 USP17L13C9JLJ4 530 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 USP17L11C9JVI0 530 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 USP17L18D6R9N7 530 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 USP17L22D6RA61 530 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 USP17L17D6RBQ6 530 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 USP17L19D6RCP7 530 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 USP17L20D6RJB6 530 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ADCY7P51828 1080 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 USP17L24Q0WX57 530 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 MKRN3Q13064 507 aaKnown RBP7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 INF2Q27J81 1249 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 KLHL40Q2TBA0 621 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SUPT20HL1Q3ZLR7 823 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SPECC1Q5M775 1068 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 AXDND1Q5T1B0 1012 aaPredicted RBP7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 TREML2Q5T2D2 321 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 USP17L6PQ6QN14 398 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 POTEEQ6S8J3 1075 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 DAGLBQ8NCG7 672 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ZNF280CQ8ND82 737 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms