RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 CYP2D6P10635 497 aa11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 KCTD2Q14681 263 aa11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 TMEM31Q5JXX7 168 aa11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 PPP2R2DQ66LE6 453 aa11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 KRT40Q6A162 431 aa11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 OTOP2Q7RTS6 562 aa11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 RIOX2Q8IUF8 465 aa11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 ARHGAP45Q92619 1136 aa11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 GLT1D1Q96MS3 346 aa11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 RIOK1Q9BRS2 568 aaKnown RBP11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 TSPYL2Q9H2G4 693 aaPredicted RBP11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 ANTXR1Q9H6X2 564 aa11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 DBNLQ9UJU6 430 aaKnown RBP11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 TNNQ9UQP3 1299 aa11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 CNPY2Q9Y2B0 182 aa11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 DIS3Q9Y2L1 958 aaKnown RBP11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 ELP1O95163 1332 aa11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 A0A0U1RQG5 324 aaPredicted RBP11.27□□□□□ -0.61
SMARCD2-208ENST00000580054 ARVCFO00192 962 aa11.27□□□□□ -0.61
SMARCD2-208ENST00000580054 ERC2O15083 957 aa11.27□□□□□ -0.61
SMARCD2-208ENST00000580054 GNAI2P04899 355 aa11.27□□□□□ -0.61
SMARCD2-208ENST00000580054 C6orf222P0C671 652 aaPredicted RBP11.27□□□□□ -0.61
SMARCD2-208ENST00000580054 AKR1B1P15121 316 aa11.27□□□□□ -0.61
SMARCD2-208ENST00000580054 CST5P28325 142 aaPredicted RBP11.27□□□□□ -0.61
SMARCD2-208ENST00000580054 ALYREFQ86V81 257 aaKnown RBP11.27□□□□□ -0.61
SMARCD2-208ENST00000580054 VTI1AQ96AJ9 217 aa11.27□□□□□ -0.61
SMARCD2-208ENST00000580054 ZNF512BQ96KM6 892 aaPredicted RBP11.27□□□□□ -0.61
SMARCD2-208ENST00000580054 VCPKMTQ9H867 229 aa11.27□□□□□ -0.61
SMARCD2-208ENST00000580054 GPR108Q9NPR9 543 aa11.27□□□□□ -0.61
SMARCD2-208ENST00000580054 ZNF214Q9UL59 606 aaPredicted RBP11.27□□□□□ -0.61
SMARCD2-208ENST00000580054 FAM184BQ9ULE4 1060 aa11.27□□□□□ -0.61
SMARCD2-208ENST00000580054 EPOPA6NHQ4 379 aa11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 SMIM22K7EJ46 135 aa11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 WDR46O15213 610 aaKnown RBP11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 DUSP11O75319 330 aaKnown RBP11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 CD4P01730 458 aa11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 FGBP02675 491 aa11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 ICA1Q05084 483 aa11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 AAK1Q2M2I8 961 aa11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 TMEM179Q6ZVK1 233 aa11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 REPS2Q8NFH8 660 aa11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 DYNLL2Q96FJ2 89 aa11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 CERS4Q9HA82 394 aa11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 MCM9Q9NXL9 1143 aa11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 ADAMTS5Q9UNA0 930 aa11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 TMX2Q9Y320 296 aa11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 MTCH2Q9Y6C9 303 aa11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 PTPRSQ13332 1948 aa11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 ZBED9Q6R2W3 1325 aa11.26□□□□□ -0.61
SMARCD2-208ENST00000580054 VWA5AO00534 786 aa11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 CTAGE5O15320 804 aa11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 IPO8O15397 1037 aaKnown RBP11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 TLL1O43897 1013 aa11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 TRIM27P14373 513 aa11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 STAT3P40763 770 aa11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 CCL23P55773 120 aa11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 OS9Q13438 667 aaPredicted RBP11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 CERS3Q8IU89 383 aa11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 SDR42E1Q8WUS8 393 aa11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 FRAT1Q92837 279 aaPredicted RBP11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 VWCEQ96DN2 955 aa11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 CCDC8Q9H0W5 538 aaPredicted RBP11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 UPF3AQ9H1J1 476 aaKnown RBP11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 WNT8AQ9H1J5 351 aa11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 MTIF3Q9H2K0 278 aaKnown RBP11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 HIPK3Q9H422 1215 aa11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 ARHGEF10LQ9HCE6 1279 aa11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 PPP1R9AQ9ULJ8 1098 aa11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 GREB1LQ9C091 1923 aaPredicted RBP11.25□□□□□ -0.61
SMARCD2-208ENST00000580054 TLR3O15455 904 aaKnown RBP11.24□□□□□ -0.61
SMARCD2-208ENST00000580054 IGSF3O75054 1194 aa11.24□□□□□ -0.61
SMARCD2-208ENST00000580054 ARHGEF15O94989 841 aa11.24□□□□□ -0.61
SMARCD2-208ENST00000580054 PTGS1P23219 599 aa11.24□□□□□ -0.61
SMARCD2-208ENST00000580054 GJA9P57773 515 aa11.24□□□□□ -0.61
SMARCD2-208ENST00000580054 BEX3Q00994 111 aa11.24□□□□□ -0.61
SMARCD2-208ENST00000580054 FAM83BQ5T0W9 1011 aa11.24□□□□□ -0.61
SMARCD2-208ENST00000580054 PCSK9Q8NBP7 692 aaKnown RBP11.24□□□□□ -0.61
SMARCD2-208ENST00000580054 CLUAP1Q96AJ1 413 aa11.24□□□□□ -0.61
SMARCD2-208ENST00000580054 FGD4Q96M96 766 aa11.24□□□□□ -0.61
SMARCD2-208ENST00000580054 CD320Q9NPF0 282 aa11.24□□□□□ -0.61
SMARCD2-208ENST00000580054 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.24□□□□□ -0.61
SMARCD2-208ENST00000580054 RIPK3Q9Y572 518 aa11.24□□□□□ -0.61
SMARCD2-208ENST00000580054 PCDHA11Q9Y5I1 949 aa11.24□□□□□ -0.61
SMARCD2-208ENST00000580054 TET1Q8NFU7 2136 aa11.24□□□□□ -0.61
SMARCD2-208ENST00000580054 TANC1Q9C0D5 1861 aa11.23□□□□□ -0.61
SMARCD2-208ENST00000580054 DNAJC25-GNG10A0A024R161 153 aa11.23□□□□□ -0.61
SMARCD2-208ENST00000580054 MAGEB6P1A0A0J9YX57 407 aa11.23□□□□□ -0.61
SMARCD2-208ENST00000580054 ZBBXA8MT70 800 aa11.23□□□□□ -0.61
SMARCD2-208ENST00000580054 GPR37L1O60883 481 aa11.23□□□□□ -0.61
SMARCD2-208ENST00000580054 BCAR3O75815 825 aa11.23□□□□□ -0.61
SMARCD2-208ENST00000580054 CA3P07451 260 aa11.23□□□□□ -0.61
SMARCD2-208ENST00000580054 ACVR2BQ13705 512 aa11.23□□□□□ -0.61
SMARCD2-208ENST00000580054 POLA2Q14181 598 aa11.23□□□□□ -0.61
SMARCD2-208ENST00000580054 CCDC144BQ3MJ40 725 aa11.23□□□□□ -0.61
SMARCD2-208ENST00000580054 GNASQ5JWF2 1037 aa11.23□□□□□ -0.61
SMARCD2-208ENST00000580054 CXCL17Q6UXB2 119 aa11.23□□□□□ -0.61
SMARCD2-208ENST00000580054 MAMDC4Q6UXC1 1216 aa11.23□□□□□ -0.61
SMARCD2-208ENST00000580054 LCORLQ8N3X6 602 aa11.23□□□□□ -0.61
SMARCD2-208ENST00000580054 MSL3Q8N5Y2 521 aaKnown RBP11.23□□□□□ -0.61
SMARCD2-208ENST00000580054 EAF2Q96CJ1 260 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms