RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 RAET1EQ8TD07 263 aa11.76□□□□□ -0.53
MKS1-208ENST00000579358 TMEM87BQ96K49 555 aa11.76□□□□□ -0.53
MKS1-208ENST00000579358 TEX13BQ9BXU2 312 aa11.76□□□□□ -0.53
MKS1-208ENST00000579358 MROH8Q9H579 483 aa11.76□□□□□ -0.53
MKS1-208ENST00000579358 ISY1Q9ULR0 285 aaKnown RBP11.76□□□□□ -0.53
MKS1-208ENST00000579358 GABRQQ9UN88 632 aa11.76□□□□□ -0.53
MKS1-208ENST00000579358 WDR19Q8NEZ3 1342 aa11.76□□□□□ -0.53
MKS1-208ENST00000579358 PRC1O43663 620 aa11.75□□□□□ -0.53
MKS1-208ENST00000579358 HMGB1P09429 215 aaKnown RBP11.75□□□□□ -0.53
MKS1-208ENST00000579358 ERCC3P19447 782 aa11.75□□□□□ -0.53
MKS1-208ENST00000579358 GRB14Q14449 540 aa11.75□□□□□ -0.53
MKS1-208ENST00000579358 PLS1Q14651 629 aa11.75□□□□□ -0.53
MKS1-208ENST00000579358 WTAPQ15007 396 aa11.75□□□□□ -0.53
MKS1-208ENST00000579358 ASPRV1Q53RT3 343 aa11.75□□□□□ -0.53
MKS1-208ENST00000579358 TMEM67Q5HYA8 995 aa11.75□□□□□ -0.53
MKS1-208ENST00000579358 ABRAQ8N0Z2 381 aa11.75□□□□□ -0.53
MKS1-208ENST00000579358 SLAIN1Q8ND83 568 aa11.75□□□□□ -0.53
MKS1-208ENST00000579358 IGDCC4Q8TDY8 1250 aa11.75□□□□□ -0.53
MKS1-208ENST00000579358 PXYLP1Q8TE99 480 aa11.75□□□□□ -0.53
MKS1-208ENST00000579358 NEK1Q96PY6 1258 aa11.75□□□□□ -0.53
MKS1-208ENST00000579358 NUDT12Q9BQG2 462 aa11.75□□□□□ -0.53
MKS1-208ENST00000579358 CWC22Q9HCG8 908 aaKnown RBP11.75□□□□□ -0.53
MKS1-208ENST00000579358 GJD2Q9UKL4 321 aa11.75□□□□□ -0.53
MKS1-208ENST00000579358 PRR12Q9ULL5 1215 aa11.75□□□□□ -0.53
MKS1-208ENST00000579358 MTMR7Q9Y216 660 aa11.75□□□□□ -0.53
MKS1-208ENST00000579358 CTDP1Q9Y5B0 961 aaPredicted RBP11.75□□□□□ -0.53
MKS1-208ENST00000579358 IVNS1ABPQ9Y6Y0 642 aa11.75□□□□□ -0.53
MKS1-208ENST00000579358 RLFQ13129 1914 aa11.74□□□□□ -0.53
MKS1-208ENST00000579358 SLC15A5A6NIM6 579 aa11.74□□□□□ -0.53
MKS1-208ENST00000579358 SH2B2O14492 632 aaPredicted RBP11.74□□□□□ -0.53
MKS1-208ENST00000579358 STRNO43815 780 aa11.74□□□□□ -0.53
MKS1-208ENST00000579358 XRCC5P13010 732 aaKnown RBP11.74□□□□□ -0.53
MKS1-208ENST00000579358 PTPREP23469 700 aa11.74□□□□□ -0.53
MKS1-208ENST00000579358 STAT3P40763 770 aa11.74□□□□□ -0.53
MKS1-208ENST00000579358 SLC9C1Q4G0N8 1177 aa11.74□□□□□ -0.53
MKS1-208ENST00000579358 MORN1Q5T089 497 aa11.74□□□□□ -0.53
MKS1-208ENST00000579358 SYDE2Q5VT97 1194 aa11.74□□□□□ -0.53
MKS1-208ENST00000579358 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.74□□□□□ -0.53
MKS1-208ENST00000579358 CHST3Q7LGC8 479 aa11.74□□□□□ -0.53
MKS1-208ENST00000579358 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
MKS1-208ENST00000579358 TMTC2Q8N394 836 aa11.74□□□□□ -0.53
MKS1-208ENST00000579358 USP6NLQ92738 828 aa11.74□□□□□ -0.53
MKS1-208ENST00000579358 ARMC5Q96C12 935 aa11.74□□□□□ -0.53
MKS1-208ENST00000579358 LY9Q9HBG7 655 aa11.74□□□□□ -0.53
MKS1-208ENST00000579358 FRMPD2Q68DX3 1309 aaPredicted RBP11.74□□□□□ -0.53
MKS1-208ENST00000579358 MYH4Q9Y623 1939 aa11.74□□□□□ -0.53
MKS1-208ENST00000579358 ZSWIM8A7E2V4 1837 aa11.73□□□□□ -0.53
MKS1-208ENST00000579358 DDAH1O94760 285 aa11.73□□□□□ -0.53
MKS1-208ENST00000579358 PARP1P09874 1014 aaKnown RBP11.73□□□□□ -0.53
MKS1-208ENST00000579358 GRK4P32298 578 aa11.73□□□□□ -0.53
MKS1-208ENST00000579358 RGS2P41220 211 aa11.73□□□□□ -0.53
MKS1-208ENST00000579358 LIFRP42702 1097 aa11.73□□□□□ -0.53
MKS1-208ENST00000579358 MAP2K5Q13163 448 aa11.73□□□□□ -0.53
MKS1-208ENST00000579358 ADCK5Q3MIX3 580 aa11.73□□□□□ -0.53
MKS1-208ENST00000579358 WDR78Q5VTH9 848 aa11.73□□□□□ -0.53
MKS1-208ENST00000579358 SNRNP48Q6IEG0 339 aaKnown RBP11.73□□□□□ -0.53
MKS1-208ENST00000579358 TTBK2Q6IQ55 1244 aa11.73□□□□□ -0.53
MKS1-208ENST00000579358 DHX32Q7L7V1 743 aaKnown RBP11.73□□□□□ -0.53
MKS1-208ENST00000579358 NBPF11Q86T75 865 aa11.73□□□□□ -0.53
MKS1-208ENST00000579358 NCAPG2Q86XI2 1143 aa11.73□□□□□ -0.53
MKS1-208ENST00000579358 TRMT44Q8IYL2 757 aaKnown RBP11.73□□□□□ -0.53
MKS1-208ENST00000579358 MAP3K14Q99558 947 aa11.73□□□□□ -0.53
MKS1-208ENST00000579358 APBA2Q99767 749 aa11.73□□□□□ -0.53
MKS1-208ENST00000579358 USP26Q9BXU7 913 aa11.73□□□□□ -0.53
MKS1-208ENST00000579358 RANBP17Q9H2T7 1088 aaKnown RBP11.73□□□□□ -0.53
MKS1-208ENST00000579358 RAVER2Q9HCJ3 691 aaKnown RBP11.73□□□□□ -0.53
MKS1-208ENST00000579358 GPCPD1Q9NPB8 672 aa11.73□□□□□ -0.53
MKS1-208ENST00000579358 PNMA2Q9UL42 364 aa11.73□□□□□ -0.53
MKS1-208ENST00000579358 SNX14Q9Y5W7 946 aa11.73□□□□□ -0.53
MKS1-208ENST00000579358 ZNF536O15090 1300 aa11.72□□□□□ -0.53
MKS1-208ENST00000579358 ADCY3O60266 1144 aa11.72□□□□□ -0.53
MKS1-208ENST00000579358 HOXC6P09630 235 aa11.72□□□□□ -0.53
MKS1-208ENST00000579358 FCER1AP12319 257 aa11.72□□□□□ -0.53
MKS1-208ENST00000579358 SLC16A2P36021 539 aa11.72□□□□□ -0.53
MKS1-208ENST00000579358 EXOSC10Q01780 885 aaKnown RBP11.72□□□□□ -0.53
MKS1-208ENST00000579358 TROAPQ12815 778 aa11.72□□□□□ -0.53
MKS1-208ENST00000579358 COL9A3Q14050 684 aaPredicted RBP11.72□□□□□ -0.53
MKS1-208ENST00000579358 GRM4Q14833 912 aa11.72□□□□□ -0.53
MKS1-208ENST00000579358 TKFCQ3LXA3 575 aa11.72□□□□□ -0.53
MKS1-208ENST00000579358 CATIPQ7Z7H3 387 aa11.72□□□□□ -0.53
MKS1-208ENST00000579358 CPXCR1Q8N123 301 aa11.72□□□□□ -0.53
MKS1-208ENST00000579358 CHST13Q8NET6 341 aa11.72□□□□□ -0.53
MKS1-208ENST00000579358 CHMP4CQ96CF2 233 aa11.72□□□□□ -0.53
MKS1-208ENST00000579358 ZNF333Q96JL9 665 aa11.72□□□□□ -0.53
MKS1-208ENST00000579358 SENP2Q9HC62 589 aa11.72□□□□□ -0.53
MKS1-208ENST00000579358 FBXO40Q9UH90 709 aa11.72□□□□□ -0.53
MKS1-208ENST00000579358 PARP14Q460N5 1801 aa11.72□□□□□ -0.53
MKS1-208ENST00000579358 CCDC69A6NI79 296 aa11.71□□□□□ -0.53
MKS1-208ENST00000579358 ICAM1P05362 532 aa11.71□□□□□ -0.53
MKS1-208ENST00000579358 GOLGA8HP0CJ92 632 aa11.71□□□□□ -0.53
MKS1-208ENST00000579358 CALM1P0DP23 149 aa11.71□□□□□ -0.53
MKS1-208ENST00000579358 CALM2P0DP24 149 aa11.71□□□□□ -0.53
MKS1-208ENST00000579358 CALM3P0DP25 149 aa11.71□□□□□ -0.53
MKS1-208ENST00000579358 PSMA5P28066 241 aa11.71□□□□□ -0.53
MKS1-208ENST00000579358 ADORA2AP29274 412 aa11.71□□□□□ -0.53
MKS1-208ENST00000579358 UBXN2AP68543 259 aa11.71□□□□□ -0.53
MKS1-208ENST00000579358 KCTD2Q14681 263 aa11.71□□□□□ -0.53
MKS1-208ENST00000579358 SGMS1Q86VZ5 419 aa11.71□□□□□ -0.53
MKS1-208ENST00000579358 ZNF654Q8IZM8 581 aa11.71□□□□□ -0.53
MKS1-208ENST00000579358 SH3TC2Q8TF17 1288 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms