RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 FAM221BA6H8Z2 402 aa7.62□□□□□ -1.19
PTPRM-208ENST00000578600 HCLS1P14317 486 aaPredicted RBP7.62□□□□□ -1.19
PTPRM-208ENST00000578600 HSD3B2P26439 372 aa7.62□□□□□ -1.19
PTPRM-208ENST00000578600 ASPAP45381 313 aa7.62□□□□□ -1.19
PTPRM-208ENST00000578600 CHMP4BP1P59074 171 aa7.62□□□□□ -1.19
PTPRM-208ENST00000578600 NKG7Q16617 165 aa7.62□□□□□ -1.19
PTPRM-208ENST00000578600 ARSHQ5FYA8 562 aa7.62□□□□□ -1.19
PTPRM-208ENST00000578600 EGFLAMQ63HQ2 1017 aa7.62□□□□□ -1.19
PTPRM-208ENST00000578600 TTC6Q86TZ1 520 aa7.62□□□□□ -1.19
PTPRM-208ENST00000578600 SLFN12Q8IYM2 578 aa7.62□□□□□ -1.19
PTPRM-208ENST00000578600 FAM46AQ96IP4 442 aaKnown RBP7.62□□□□□ -1.19
PTPRM-208ENST00000578600 NACC1Q96RE7 527 aa7.62□□□□□ -1.19
PTPRM-208ENST00000578600 UBL7Q96S82 380 aaPredicted RBP7.62□□□□□ -1.19
PTPRM-208ENST00000578600 ACSS3Q9H6R3 686 aa7.62□□□□□ -1.19
PTPRM-208ENST00000578600 KLHL3Q9UH77 587 aa7.62□□□□□ -1.19
PTPRM-208ENST00000578600 MAPK8IP1Q9UQF2 711 aa7.62□□□□□ -1.19
PTPRM-208ENST00000578600 SHPRHQ149N8 1683 aa7.62□□□□□ -1.19
PTPRM-208ENST00000578600 DIP2AQ14689 1571 aa7.62□□□□□ -1.19
PTPRM-208ENST00000578600 PNPLA6Q8IY17 1366 aa7.61□□□□□ -1.19
PTPRM-208ENST00000578600 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.61□□□□□ -1.19
PTPRM-208ENST00000578600 APBA3O96018 575 aa7.61□□□□□ -1.19
PTPRM-208ENST00000578600 CDK11BP21127 795 aaKnown RBP7.61□□□□□ -1.19
PTPRM-208ENST00000578600 IREB2P48200 963 aaKnown RBP7.61□□□□□ -1.19
PTPRM-208ENST00000578600 MBTPS1Q14703 1052 aa7.61□□□□□ -1.19
PTPRM-208ENST00000578600 ALYREFQ86V81 257 aaKnown RBP7.61□□□□□ -1.19
PTPRM-208ENST00000578600 KCT2Q8NC54 265 aa7.61□□□□□ -1.19
PTPRM-208ENST00000578600 SLC9A7Q96T83 725 aa7.61□□□□□ -1.19
PTPRM-208ENST00000578600 CEP41Q9BYV8 373 aa7.61□□□□□ -1.19
PTPRM-208ENST00000578600 ADGRB3O60242 1522 aa7.61□□□□□ -1.19
PTPRM-208ENST00000578600 ZFYVE9O95405 1425 aa7.61□□□□□ -1.19
PTPRM-208ENST00000578600 SBNO2Q9Y2G9 1366 aa7.6□□□□□ -1.19
PTPRM-208ENST00000578600 PIK3C2BO00750 1634 aa7.6□□□□□ -1.19
PTPRM-208ENST00000578600 LTBP3Q9NS15 1303 aa7.6□□□□□ -1.19
PTPRM-208ENST00000578600 PDPK1O15530 556 aa7.6□□□□□ -1.19
PTPRM-208ENST00000578600 DDAH1O94760 285 aa7.6□□□□□ -1.19
PTPRM-208ENST00000578600 YARSP54577 528 aaKnown RBP7.6□□□□□ -1.19
PTPRM-208ENST00000578600 TCEAL1Q15170 157 aa7.6□□□□□ -1.19
PTPRM-208ENST00000578600 ZYXQ15942 572 aaKnown RBP7.6□□□□□ -1.19
PTPRM-208ENST00000578600 UNC5AQ6ZN44 842 aa7.6□□□□□ -1.19
PTPRM-208ENST00000578600 CDC37L1Q7L3B6 337 aa7.6□□□□□ -1.19
PTPRM-208ENST00000578600 SMYD4Q8IYR2 804 aaPredicted RBP7.6□□□□□ -1.19
PTPRM-208ENST00000578600 DZIP1LQ8IYY4 767 aaKnown RBP7.6□□□□□ -1.19
PTPRM-208ENST00000578600 ANKRD13AQ8IZ07 590 aa7.6□□□□□ -1.19
PTPRM-208ENST00000578600 FAM13CQ8NE31 585 aa7.6□□□□□ -1.19
PTPRM-208ENST00000578600 MICAL1Q8TDZ2 1067 aa7.6□□□□□ -1.19
PTPRM-208ENST00000578600 DNAJC7Q99615 494 aa7.6□□□□□ -1.19
PTPRM-208ENST00000578600 PIDD1Q9HB75 910 aa7.6□□□□□ -1.19
PTPRM-208ENST00000578600 PCOLCE2Q9UKZ9 415 aa7.6□□□□□ -1.19
PTPRM-208ENST00000578600 SLC12A7Q9Y666 1083 aa7.6□□□□□ -1.19
PTPRM-208ENST00000578600 NPHP3Q7Z494 1330 aa7.59□□□□□ -1.19
PTPRM-208ENST00000578600 SETD1AO15047 1707 aaKnown RBP7.59□□□□□ -1.19
PTPRM-208ENST00000578600 RNGTTO60942 597 aaKnown RBP7.59□□□□□ -1.19
PTPRM-208ENST00000578600 CST3P01034 146 aaPredicted RBP7.59□□□□□ -1.19
PTPRM-208ENST00000578600 GLB1P16278 677 aa7.59□□□□□ -1.19
PTPRM-208ENST00000578600 CDPF1Q6NVV7 123 aa7.59□□□□□ -1.19
PTPRM-208ENST00000578600 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.59□□□□□ -1.19
PTPRM-208ENST00000578600 EZH1Q92800 747 aaPredicted RBP7.59□□□□□ -1.19
PTPRM-208ENST00000578600 RNPC3Q96LT9 517 aaKnown RBP7.59□□□□□ -1.19
PTPRM-208ENST00000578600 XIRP1Q702N8 1843 aaKnown RBP7.59□□□□□ -1.19
PTPRM-208ENST00000578600 TRPM2O94759 1503 aa7.58□□□□□ -1.2
PTPRM-208ENST00000578600 ASXL1Q8IXJ9 1541 aa7.58□□□□□ -1.2
PTPRM-208ENST00000578600 ENPP3O14638 875 aa7.58□□□□□ -1.2
PTPRM-208ENST00000578600 RGS13O14921 159 aa7.58□□□□□ -1.2
PTPRM-208ENST00000578600 RASGRF1Q13972 1273 aa7.58□□□□□ -1.2
PTPRM-208ENST00000578600 UVSSAQ2YD98 709 aa7.58□□□□□ -1.2
PTPRM-208ENST00000578600 PRAMEF13Q5VWM6 474 aa7.58□□□□□ -1.2
PTPRM-208ENST00000578600 FOXQ1Q9C009 403 aa7.58□□□□□ -1.2
PTPRM-208ENST00000578600 SART1O43290 800 aaKnown RBP7.57□□□□□ -1.2
PTPRM-208ENST00000578600 GJB6O95452 261 aa7.57□□□□□ -1.2
PTPRM-208ENST00000578600 RAG1P15918 1043 aa7.57□□□□□ -1.2
PTPRM-208ENST00000578600 POLR2BP30876 1174 aaKnown RBP7.57□□□□□ -1.2
PTPRM-208ENST00000578600 CCNFP41002 786 aa7.57□□□□□ -1.2
PTPRM-208ENST00000578600 MTERF2Q49AM1 385 aa7.57□□□□□ -1.2
PTPRM-208ENST00000578600 SEZ6L2Q6UXD5 910 aa7.57□□□□□ -1.2
PTPRM-208ENST00000578600 UNC5CLQ8IV45 518 aa7.57□□□□□ -1.2
PTPRM-208ENST00000578600 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.57□□□□□ -1.2
PTPRM-208ENST00000578600 FAM178BQ8IXR5 827 aa7.57□□□□□ -1.2
PTPRM-208ENST00000578600 ARMC10Q8N2F6 343 aa7.57□□□□□ -1.2
PTPRM-208ENST00000578600 SH3TC2Q8TF17 1288 aa7.57□□□□□ -1.2
PTPRM-208ENST00000578600 MEGF10Q96KG7 1140 aa7.57□□□□□ -1.2
PTPRM-208ENST00000578600 KIF2CQ99661 725 aa7.57□□□□□ -1.2
PTPRM-208ENST00000578600 DPH2Q9BQC3 489 aaPredicted RBP7.57□□□□□ -1.2
PTPRM-208ENST00000578600 SEMA6CQ9H3T2 930 aa7.57□□□□□ -1.2
PTPRM-208ENST00000578600 ABCC5O15440 1437 aa7.57□□□□□ -1.2
PTPRM-208ENST00000578600 MST1RQ04912 1400 aa7.57□□□□□ -1.2
PTPRM-208ENST00000578600 ATRNO75882 1429 aa7.56□□□□□ -1.2
PTPRM-208ENST00000578600 ADAMTS13Q76LX8 1427 aa7.56□□□□□ -1.2
PTPRM-208ENST00000578600 CDC45O75419 566 aa7.56□□□□□ -1.2
PTPRM-208ENST00000578600 LRIG2O94898 1065 aa7.56□□□□□ -1.2
PTPRM-208ENST00000578600 UBOX5O94941 541 aa7.56□□□□□ -1.2
PTPRM-208ENST00000578600 USP11P51784 963 aa7.56□□□□□ -1.2
PTPRM-208ENST00000578600 SGO2Q562F6 1265 aa7.56□□□□□ -1.2
PTPRM-208ENST00000578600 RNF187Q5TA31 235 aaPredicted RBP7.56□□□□□ -1.2
PTPRM-208ENST00000578600 C6orf15Q6UXA7 325 aaPredicted RBP7.56□□□□□ -1.2
PTPRM-208ENST00000578600 TXNRD3Q86VQ6 643 aa7.56□□□□□ -1.2
PTPRM-208ENST00000578600 PPP1R13LQ8WUF5 828 aa7.56□□□□□ -1.2
PTPRM-208ENST00000578600 CYB5D2Q8WUJ1 264 aa7.56□□□□□ -1.2
PTPRM-208ENST00000578600 FBLIM1Q8WUP2 373 aa7.56□□□□□ -1.2
PTPRM-208ENST00000578600 MYRFLQ96LU7 910 aa7.56□□□□□ -1.2
PTPRM-208ENST00000578600 CCDC74BQ96LY2 380 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms