RNA–Protein interactions for RNA: ENST00000578593.1

DDX42-207, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 2,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-207ENST00000578593 BPIFA3Q9BQP9 254 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 VCPKMTQ9H867 229 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 LTBP4Q8N2S1 1624 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 MAP3K19Q56UN5 1328 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 MEFVO15553 781 aaPredicted RBP8.33□□□□□ -1.08
DDX42-207ENST00000578593 SCG2P13521 617 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 TXLNAP40222 546 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 ARHGAP25P42331 645 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 NDUFA8P51970 172 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 ARPC4P59998 168 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 DYNC1I2Q13409 638 aaKnown RBP8.33□□□□□ -1.08
DDX42-207ENST00000578593 ZNF589Q86UQ0 364 aaPredicted RBP8.33□□□□□ -1.08
DDX42-207ENST00000578593 LCA5Q86VQ0 697 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 SPATS2Q86XZ4 545 aaKnown RBP8.33□□□□□ -1.08
DDX42-207ENST00000578593 AFAP1L1Q8TED9 768 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 MRPS27Q92552 414 aaKnown RBP8.33□□□□□ -1.08
DDX42-207ENST00000578593 GOLGA1Q92805 767 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 DHX58Q96C10 678 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 HSD3B7Q9H2F3 369 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 ESF1Q9H501 851 aaKnown RBP8.33□□□□□ -1.08
DDX42-207ENST00000578593 SUGCTQ9HAC7 445 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 PCDHA7Q9UN72 937 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 PALM3A6NDB9 673 aaPredicted RBP8.33□□□□□ -1.08
DDX42-207ENST00000578593 EVI5O60447 810 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 PHACTR2O75167 634 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 KIAA0754O94854 1291 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 TCF7P36402 384 aaPredicted RBP8.33□□□□□ -1.08
DDX42-207ENST00000578593 BLMHQ13867 455 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 BRD3Q15059 726 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 BEND6Q5SZJ8 279 aaPredicted RBP8.33□□□□□ -1.08
DDX42-207ENST00000578593 Q6ZUG5 572 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 TMEM139Q8IV31 216 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.33□□□□□ -1.08
DDX42-207ENST00000578593 HNRNPLLQ8WVV9 542 aaKnown RBP8.33□□□□□ -1.08
DDX42-207ENST00000578593 DHTKD1Q96HY7 919 aaPredicted RBP8.33□□□□□ -1.08
DDX42-207ENST00000578593 LRRC2Q9BYS8 371 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 EBF2Q9HAK2 575 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 COMMD8Q9NX08 183 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 ITGB1BP2Q9UKP3 347 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 SSX2IPQ9Y2D8 614 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 TMED5Q9Y3A6 229 aa8.33□□□□□ -1.08
DDX42-207ENST00000578593 A2ML1A8K2U0 1454 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 ZNF335Q9H4Z2 1342 aaPredicted RBP8.32□□□□□ -1.08
DDX42-207ENST00000578593 NUTM2FA1L443 756 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 SLC26A4O43511 780 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 MGRN1O60291 552 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 MTRF1O75570 445 aaKnown RBP8.32□□□□□ -1.08
DDX42-207ENST00000578593 WDHD1O75717 1129 aaPredicted RBP8.32□□□□□ -1.08
DDX42-207ENST00000578593 PENKP01210 267 aaPredicted RBP8.32□□□□□ -1.08
DDX42-207ENST00000578593 CSE1LP55060 971 aaKnown RBP8.32□□□□□ -1.08
DDX42-207ENST00000578593 AACSQ86V21 672 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 APLFQ8IW19 511 aaPredicted RBP8.32□□□□□ -1.08
DDX42-207ENST00000578593 KIFC2Q96AC6 838 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 GPATCH3Q96I76 525 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 MPP4Q96JB8 637 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 SPOCK3Q9BQ16 436 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 LUC7LQ9NQ29 371 aaKnown RBP8.32□□□□□ -1.08
DDX42-207ENST00000578593 WDR35Q9P2L0 1181 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 ATXN10Q9UBB4 475 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 HOOK1Q9UJC3 728 aaKnown RBP8.32□□□□□ -1.08
DDX42-207ENST00000578593 PA2G4Q9UQ80 394 aaKnown RBP8.32□□□□□ -1.08
DDX42-207ENST00000578593 TMEM247A6NEH6 219 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 ARHGAP6O43182 974 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 AKR1B10O60218 316 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 PDGFRBP09619 1106 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 PSMD7P51665 324 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 UBASH3AP57075 661 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 ARHGEF6Q15052 776 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 CFAP100Q494V2 611 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 NAA16Q6N069 864 aaPredicted RBP8.32□□□□□ -1.08
DDX42-207ENST00000578593 CYB5D1Q6P9G0 228 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 CCDC121Q6ZUS5 278 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 LRRC49Q8IUZ0 686 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 WDR75Q8IWA0 830 aaKnown RBP8.32□□□□□ -1.08
DDX42-207ENST00000578593 SREK1Q8WXA9 508 aaKnown RBP8.32□□□□□ -1.08
DDX42-207ENST00000578593 SEC62Q99442 399 aaKnown RBP8.32□□□□□ -1.08
DDX42-207ENST00000578593 SYNCQ9H7C4 482 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 SNRKQ9NRH2 765 aa8.32□□□□□ -1.08
DDX42-207ENST00000578593 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.32□□□□□ -1.08
DDX42-207ENST00000578593 MED23Q9ULK4 1368 aa8.31□□□□□ -1.08
DDX42-207ENST00000578593 ABCC6O95255 1503 aa8.31□□□□□ -1.08
DDX42-207ENST00000578593 BICDL2A1A5D9 508 aa8.31□□□□□ -1.08
DDX42-207ENST00000578593 GOLGA8AA7E2F4 631 aa8.31□□□□□ -1.08
DDX42-207ENST00000578593 TMEM110-MUSTN1A8MSY1 372 aa8.31□□□□□ -1.08
DDX42-207ENST00000578593 TMEM232C9JQI7 657 aa8.31□□□□□ -1.08
DDX42-207ENST00000578593 WASLO00401 505 aaPredicted RBP8.31□□□□□ -1.08
DDX42-207ENST00000578593 SART1O43290 800 aaKnown RBP8.31□□□□□ -1.08
DDX42-207ENST00000578593 CDC25CP30307 473 aa8.31□□□□□ -1.08
DDX42-207ENST00000578593 AMPHP49418 695 aa8.31□□□□□ -1.08
DDX42-207ENST00000578593 CTCFP49711 727 aaPredicted RBP8.31□□□□□ -1.08
DDX42-207ENST00000578593 NLRP12P59046 1061 aa8.31□□□□□ -1.08
DDX42-207ENST00000578593 BPIFB4P59827 614 aa8.31□□□□□ -1.08
DDX42-207ENST00000578593 ITIH3Q06033 890 aa8.31□□□□□ -1.08
DDX42-207ENST00000578593 SLMAPQ14BN4 828 aa8.31□□□□□ -1.08
DDX42-207ENST00000578593 NBPF14Q5TI25 921 aa8.31□□□□□ -1.08
DDX42-207ENST00000578593 CCSAPQ6IQ19 270 aaPredicted RBP8.31□□□□□ -1.08
DDX42-207ENST00000578593 PI16Q6UXB8 463 aa8.31□□□□□ -1.08
DDX42-207ENST00000578593 C11orf96Q7Z7L8 435 aa8.31□□□□□ -1.08
DDX42-207ENST00000578593 FCHSD1Q86WN1 690 aa8.31□□□□□ -1.08
DDX42-207ENST00000578593 NSUN7Q8NE18 718 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms