RNA–Protein interactions for RNA: ENST00000578502.1

ERBB2-207, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-207ENST00000578502 IMMTQ16891 758 aaKnown RBP12.43□□□□□ -0.42
ERBB2-207ENST00000578502 SNRNP48Q6IEG0 339 aaKnown RBP12.43□□□□□ -0.42
ERBB2-207ENST00000578502 RIOX2Q8IUF8 465 aa12.43□□□□□ -0.42
ERBB2-207ENST00000578502 PRPF38AQ8NAV1 312 aaKnown RBP12.43□□□□□ -0.42
ERBB2-207ENST00000578502 SHCBP1Q8NEM2 672 aa12.43□□□□□ -0.42
ERBB2-207ENST00000578502 U2AF1L4Q8WU68 220 aaKnown RBP12.43□□□□□ -0.42
ERBB2-207ENST00000578502 GMCL1Q96IK5 515 aa12.43□□□□□ -0.42
ERBB2-207ENST00000578502 APBA2Q99767 749 aa12.43□□□□□ -0.42
ERBB2-207ENST00000578502 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.43□□□□□ -0.42
ERBB2-207ENST00000578502 RNF41Q9H4P4 317 aaPredicted RBP12.43□□□□□ -0.42
ERBB2-207ENST00000578502 SLC38A10Q9HBR0 1119 aa12.43□□□□□ -0.42
ERBB2-207ENST00000578502 GPCPD1Q9NPB8 672 aa12.43□□□□□ -0.42
ERBB2-207ENST00000578502 PAK6Q9NQU5 681 aaPredicted RBP12.43□□□□□ -0.42
ERBB2-207ENST00000578502 TCP11L1Q9NUJ3 509 aa12.43□□□□□ -0.42
ERBB2-207ENST00000578502 FEM1BQ9UK73 627 aa12.43□□□□□ -0.42
ERBB2-207ENST00000578502 SYNPO2Q9UMS6 1093 aa12.43□□□□□ -0.42
ERBB2-207ENST00000578502 IVNS1ABPQ9Y6Y0 642 aa12.43□□□□□ -0.42
ERBB2-207ENST00000578502 SMCHD1A6NHR9 2005 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 ZBED4O75132 1171 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 SGPL1O95470 568 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 TOP1P11387 765 aaKnown RBP12.42□□□□□ -0.42
ERBB2-207ENST00000578502 GJA8P48165 433 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 IKQ13123 557 aaPredicted RBP12.42□□□□□ -0.42
ERBB2-207ENST00000578502 COL9A3Q14050 684 aaPredicted RBP12.42□□□□□ -0.42
ERBB2-207ENST00000578502 CCDC96Q2M329 555 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 MAP3K21Q5TCX8 1036 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 CCDC174Q6PII3 467 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 STOX1Q6ZVD7 989 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 CYB5R4Q7L1T6 521 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 DPP9Q86TI2 863 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 TRPV1Q8NER1 839 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 RUFY2Q8WXA3 655 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 ESR2Q92731 530 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 AGBL1Q96MI9 1066 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 CPVLQ9H3G5 476 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 MROH8Q9H579 483 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 ZSWIM5Q9P217 1185 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 CTNNA3Q9UI47 895 aa12.42□□□□□ -0.42
ERBB2-207ENST00000578502 ZNF236Q9UL36 1845 aa12.41□□□□□ -0.42
ERBB2-207ENST00000578502 ZNF536O15090 1300 aa12.41□□□□□ -0.42
ERBB2-207ENST00000578502 SLC25A27O95847 323 aa12.41□□□□□ -0.42
ERBB2-207ENST00000578502 IGHA2P01877 340 aa12.41□□□□□ -0.42
ERBB2-207ENST00000578502 TFRCP02786 760 aaKnown RBP12.41□□□□□ -0.42
ERBB2-207ENST00000578502 HOXC6P09630 235 aa12.41□□□□□ -0.42
ERBB2-207ENST00000578502 GOLGA8HP0CJ92 632 aa12.41□□□□□ -0.42
ERBB2-207ENST00000578502 STAT2P52630 851 aa12.41□□□□□ -0.42
ERBB2-207ENST00000578502 DCAF4Q8WV16 495 aa12.41□□□□□ -0.42
ERBB2-207ENST00000578502 MAP4K1Q92918 833 aa12.41□□□□□ -0.42
ERBB2-207ENST00000578502 ZSCAN10Q96SZ4 725 aaPredicted RBP12.41□□□□□ -0.42
ERBB2-207ENST00000578502 MMP19Q99542 508 aa12.41□□□□□ -0.42
ERBB2-207ENST00000578502 ESYT1Q9BSJ8 1104 aa12.41□□□□□ -0.42
ERBB2-207ENST00000578502 TEX13BQ9BXU2 312 aa12.41□□□□□ -0.42
ERBB2-207ENST00000578502 LSG1Q9H089 658 aaKnown RBP12.41□□□□□ -0.42
ERBB2-207ENST00000578502 HOMER2Q9NSB8 354 aa12.41□□□□□ -0.42
ERBB2-207ENST00000578502 PRR12Q9ULL5 1215 aa12.41□□□□□ -0.42
ERBB2-207ENST00000578502 RPTORQ8N122 1335 aa12.4□□□□□ -0.42
ERBB2-207ENST00000578502 PLXNA1Q9UIW2 1896 aa12.4□□□□□ -0.42
ERBB2-207ENST00000578502 STRNO43815 780 aa12.4□□□□□ -0.42
ERBB2-207ENST00000578502 NEFLP07196 543 aa12.4□□□□□ -0.42
ERBB2-207ENST00000578502 PDHBP11177 359 aa12.4□□□□□ -0.42
ERBB2-207ENST00000578502 PCP11498 1178 aaKnown RBP12.4□□□□□ -0.42
ERBB2-207ENST00000578502 FCER1AP12319 257 aa12.4□□□□□ -0.42
ERBB2-207ENST00000578502 BMP2KLQ5H9B9 411 aa12.4□□□□□ -0.42
ERBB2-207ENST00000578502 PPP4R3BQ5MIZ7 849 aa12.4□□□□□ -0.42
ERBB2-207ENST00000578502 PRAMEF19Q5SWL8 479 aa12.4□□□□□ -0.42
ERBB2-207ENST00000578502 CHST3Q7LGC8 479 aa12.4□□□□□ -0.42
ERBB2-207ENST00000578502 ENAHQ8N8S7 591 aaPredicted RBP12.4□□□□□ -0.42
ERBB2-207ENST00000578502 DIS3LQ8TF46 1054 aaKnown RBP12.4□□□□□ -0.42
ERBB2-207ENST00000578502 SENP2Q9HC62 589 aa12.4□□□□□ -0.42
ERBB2-207ENST00000578502 HMX1Q9NP08 348 aaPredicted RBP12.4□□□□□ -0.42
ERBB2-207ENST00000578502 RBM8AQ9Y5S9 174 aaKnown RBP12.4□□□□□ -0.42
ERBB2-207ENST00000578502 U3KPZ7 1027 aaPredicted RBP12.4□□□□□ -0.42
ERBB2-207ENST00000578502 TNKSO95271 1327 aa12.39□□□□□ -0.43
ERBB2-207ENST00000578502 E7EWF7 191 aa12.39□□□□□ -0.43
ERBB2-207ENST00000578502 ATP2A1O14983 1001 aa12.39□□□□□ -0.43
ERBB2-207ENST00000578502 MNX1P50219 401 aaPredicted RBP12.39□□□□□ -0.43
ERBB2-207ENST00000578502 KCTD2Q14681 263 aa12.39□□□□□ -0.43
ERBB2-207ENST00000578502 LHX8Q68G74 356 aa12.39□□□□□ -0.43
ERBB2-207ENST00000578502 UBE2Q1Q7Z7E8 422 aa12.39□□□□□ -0.43
ERBB2-207ENST00000578502 FAM160B2Q86V87 743 aa12.39□□□□□ -0.43
ERBB2-207ENST00000578502 CHURC1Q8WUH1 139 aa12.39□□□□□ -0.43
ERBB2-207ENST00000578502 MAML3Q96JK9 1138 aa12.39□□□□□ -0.43
ERBB2-207ENST00000578502 TTC14Q96N46 770 aa12.39□□□□□ -0.43
ERBB2-207ENST00000578502 UBA5Q9GZZ9 404 aa12.39□□□□□ -0.43
ERBB2-207ENST00000578502 CRISPLD2Q9H0B8 497 aa12.39□□□□□ -0.43
ERBB2-207ENST00000578502 CTDP1Q9Y5B0 961 aaPredicted RBP12.39□□□□□ -0.43
ERBB2-207ENST00000578502 DDX49Q9Y6V7 483 aaKnown RBP12.39□□□□□ -0.43
ERBB2-207ENST00000578502 DNAH12Q6ZR08 3092 aa12.38□□□□□ -0.43
ERBB2-207ENST00000578502 PLA2G6O60733 806 aa12.38□□□□□ -0.43
ERBB2-207ENST00000578502 SNHG28P0DPA3 235 aa12.38□□□□□ -0.43
ERBB2-207ENST00000578502 ANTXR2P58335 489 aa12.38□□□□□ -0.43
ERBB2-207ENST00000578502 ZNF543Q08ER8 600 aa12.38□□□□□ -0.43
ERBB2-207ENST00000578502 ZNF792Q3KQV3 632 aa12.38□□□□□ -0.43
ERBB2-207ENST00000578502 MUM1L1Q5H9M0 696 aa12.38□□□□□ -0.43
ERBB2-207ENST00000578502 SYDE2Q5VT97 1194 aa12.38□□□□□ -0.43
ERBB2-207ENST00000578502 MFSD14CQ5VZR4 134 aa12.38□□□□□ -0.43
ERBB2-207ENST00000578502 ANO1Q5XXA6 986 aa12.38□□□□□ -0.43
ERBB2-207ENST00000578502 DGKHQ86XP1 1220 aa12.38□□□□□ -0.43
ERBB2-207ENST00000578502 TRMT44Q8IYL2 757 aaKnown RBP12.38□□□□□ -0.43
ERBB2-207ENST00000578502 ABRAQ8N0Z2 381 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms