RNA–Protein interactions for RNA: ENST00000578357.5

CUEDC1-208, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-208ENST00000578357 ZNF214Q9UL59 606 aaPredicted RBP12.01□□□□□ -0.49
CUEDC1-208ENST00000578357 ELP1O95163 1332 aa12.01□□□□□ -0.49
CUEDC1-208ENST00000578357 MROH7Q68CQ1 1323 aa12.01□□□□□ -0.49
CUEDC1-208ENST00000578357 DUSP11O75319 330 aaKnown RBP12□□□□□ -0.49
CUEDC1-208ENST00000578357 MBD4O95243 580 aa12□□□□□ -0.49
CUEDC1-208ENST00000578357 SNAI1O95863 264 aaPredicted RBP12□□□□□ -0.49
CUEDC1-208ENST00000578357 ADD2P35612 726 aa12□□□□□ -0.49
CUEDC1-208ENST00000578357 CDK7P50613 346 aa12□□□□□ -0.49
CUEDC1-208ENST00000578357 FAM83BQ5T0W9 1011 aa12□□□□□ -0.49
CUEDC1-208ENST00000578357 CCSAPQ6IQ19 270 aaPredicted RBP12□□□□□ -0.49
CUEDC1-208ENST00000578357 MAMDC4Q6UXC1 1216 aa12□□□□□ -0.49
CUEDC1-208ENST00000578357 CCDC129Q6ZRS4 1044 aa12□□□□□ -0.49
CUEDC1-208ENST00000578357 TMEM199Q8N511 208 aa12□□□□□ -0.49
CUEDC1-208ENST00000578357 PRPF38AQ8NAV1 312 aaKnown RBP12□□□□□ -0.49
CUEDC1-208ENST00000578357 ATXN2LQ8WWM7 1075 aaKnown RBP12□□□□□ -0.49
CUEDC1-208ENST00000578357 BUD13Q9BRD0 619 aaKnown RBP eCLIP12□□□□□ -0.49
CUEDC1-208ENST00000578357 TEX13BQ9BXU2 312 aa12□□□□□ -0.49
CUEDC1-208ENST00000578357 PAG1Q9NWQ8 432 aa12□□□□□ -0.49
CUEDC1-208ENST00000578357 SYNGAP1Q96PV0 1343 aa12□□□□□ -0.49
CUEDC1-208ENST00000578357 ROBO3Q96MS0 1386 aa12□□□□□ -0.49
CUEDC1-208ENST00000578357 MYH7P12883 1935 aa11.99□□□□□ -0.49
CUEDC1-208ENST00000578357 SMCHD1A6NHR9 2005 aa11.99□□□□□ -0.49
CUEDC1-208ENST00000578357 CYP2D7A0A087X1C5 515 aa11.99□□□□□ -0.49
CUEDC1-208ENST00000578357 ZBED4O75132 1171 aa11.99□□□□□ -0.49
CUEDC1-208ENST00000578357 C16orf59Q7L2K0 433 aa11.99□□□□□ -0.49
CUEDC1-208ENST00000578357 ZNF467Q7Z7K2 595 aaPredicted RBP11.99□□□□□ -0.49
CUEDC1-208ENST00000578357 RPAP2Q8IXW5 612 aaPredicted RBP11.99□□□□□ -0.49
CUEDC1-208ENST00000578357 REPS2Q8NFH8 660 aa11.99□□□□□ -0.49
CUEDC1-208ENST00000578357 PPM1EQ8WY54 764 aa11.99□□□□□ -0.49
CUEDC1-208ENST00000578357 LENG1Q96BZ8 264 aaPredicted RBP11.99□□□□□ -0.49
CUEDC1-208ENST00000578357 SLF1Q9BQI6 1058 aa11.99□□□□□ -0.49
CUEDC1-208ENST00000578357 ZHX1Q9UKY1 873 aaPredicted RBP11.99□□□□□ -0.49
CUEDC1-208ENST00000578357 TBX21Q9UL17 535 aa11.99□□□□□ -0.49
CUEDC1-208ENST00000578357 CTDP1Q9Y5B0 961 aaPredicted RBP11.99□□□□□ -0.49
CUEDC1-208ENST00000578357 SYNRGQ9UMZ2 1314 aa11.99□□□□□ -0.49
CUEDC1-208ENST00000578357 NAV1Q8NEY1 1877 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 DNAJC25-GNG10A0A024R161 153 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 ARVCFO00192 962 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 ATP2A1O14983 1001 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 TLR3O15455 904 aaKnown RBP11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 RAB11FIP3O75154 756 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 HMMRO75330 724 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 ASGR1P07306 291 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 C6orf222P0C671 652 aaPredicted RBP11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 ATP5JP18859 108 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 CST5P28325 142 aaPredicted RBP11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 SLC4A3P48751 1232 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 ACVR2BQ13705 512 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 UBE3CQ15386 1083 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 GNASQ5JWF2 1037 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 TMEM240Q5SV17 173 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 AKNAD1Q5T1N1 836 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 SNRNP48Q6IEG0 339 aaKnown RBP11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 ZSCAN25Q6NSZ9 544 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 CTR9Q6PD62 1173 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 USP38Q8NB14 1042 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 BOLA2Q9H3K6 86 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 ABHD16BQ9H3Z7 469 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 ZBTB40Q9NUA8 1239 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 MSRAQ9UJ68 235 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 SLC4A4Q9Y6R1 1079 aa11.98□□□□□ -0.49
CUEDC1-208ENST00000578357 A0A0U1RQG5 324 aaPredicted RBP11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 F5H6K3 240 aa11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 SMIM22K7EJ46 135 aa11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 CSF2RAP15509 400 aa11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 COL9A1P20849 921 aa11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 GJA9P57773 515 aa11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 MRPS5P82675 430 aaKnown RBP11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 KLRC3Q07444 240 aa11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 RASIP1Q5U651 963 aa11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 ZNF365Q70YC5 407 aa11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 CPXCR1Q8N123 301 aa11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 ANKRD35Q8N283 1001 aa11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 ASB2Q96Q27 587 aa11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 PBX4Q9BYU1 374 aa11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 PRDM12Q9H4Q4 367 aa11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 MKNK2Q9HBH9 465 aa11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 NYAP2Q9P242 653 aa11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 FBXO40Q9UH90 709 aa11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 RIPK3Q9Y572 518 aa11.97□□□□□ -0.49
CUEDC1-208ENST00000578357 ZNFX1Q9P2E3 1918 aaKnown RBP11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 MUC3AQ02505 3323 aa11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 GRXCR1A8MXD5 290 aa11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 FGBP02675 491 aa11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 MS4A1P11836 297 aa11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 PBX2P40425 430 aa11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 RAB30Q15771 203 aa11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 CCDC144BQ3MJ40 725 aa11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 SLFNL1Q499Z3 407 aa11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 PSRC1Q6PGN9 363 aaPredicted RBP11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 NUP88Q99567 741 aaPredicted RBP11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 HAUS7Q99871 368 aa11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 UPF3AQ9H1J1 476 aaKnown RBP11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 MTIF3Q9H2K0 278 aaKnown RBP11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 ARPP21Q9UBL0 812 aaPredicted RBP11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 CLIP2Q9UDT6 1046 aa11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 DDX19BQ9UMR2 479 aa11.96□□□□□ -0.49
CUEDC1-208ENST00000578357 A0A0G2JMZ2 1700 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms